Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:36 (3994479): wrapper (7.7.26015): starting
18:00:36 (3994479): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 18:00:36] Arguments: --nthreads 12
[2026-03-11 18:00:36] Threads: 12
[2026-03-11 18:00:36] Checking for CVMFS
[2026-03-11 18:00:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 18:00:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 18:00:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 18:00:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 18:00:37] 2.11.5.0 2587603 145143 231696 157177 3 719 39582780 45568001 20985 130560 0 1268131582 99.807 754290833 19750 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-11 18:00:37] CVMFS is ok
[2026-03-11 18:00:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 18:00:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 18:00:37] Further information can be found at the LHC@home message board.
[2026-03-11 18:00:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 18:00:37] Checking for apptainer binary...
[2026-03-11 18:00:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 18:00:37] Running /usr/bin/apptainer --version
[2026-03-11 18:00:37] apptainer version 1.4.1-1.el9
[2026-03-11 18:00:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 18:00:38] wns0056.triumf.lcg
[2026-03-11 18:00:38] apptainer works
[2026-03-11 18:00:38] Set ATHENA_PROC_NUMBER=12
[2026-03-11 18:00:38] Set ATHENA_CORE_NUMBER=12
[2026-03-11 18:00:38] Starting ATLAS job with PandaID=7050325348
[2026-03-11 18:00:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 18:05:29]  *** The last 200 lines of the pilot log: ***
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | WARNING  | wrong length of table data, x=[1773277335.0], y=[1495.0] (must be same and length>=4)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | could have reported an average CPU frequency of 2774 MHz (4 samples)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . Timing measurements:
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . get job = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . initial setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-in = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload execution = 38 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-out = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . log creation = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7050325348/pilotlog.txt
[2026-03-11 18:05:29] 2026-03-12 01:04:39,478 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-11 18:05:29] - Log from pilotlog.txt -
[2026-03-11 18:05:29] 2026-03-12 01:04:39,419 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7050325348/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | INFO     | extracted standard info from prmon json
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | WARNING  | wrong length of table data, x=[1773277335.0], y=[1495.0] (must be same and length>=4)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | could have reported an average CPU frequency of 2774 MHz (4 samples)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . Timing measurements:
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . get job = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . initial setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-in = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload execution = 38 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-out = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . log creation = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7050325348/pilotlog.txt
[2026-03-11 18:05:29] 2026-03-12 01:04:39,479 | WARNING  | 
[2026-03-11 18:05:29] [begin log extracts]
[2026-03-11 18:05:29] - Log from pilotlog.txt -
[2026-03-11 18:05:29] 2026-03-12 01:04:39,419 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7050325348/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | INFO     | extracted standard info from prmon json
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 18:05:29] 2026-03-12 01:04:39,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | WARNING  | wrong length of table data, x=[1773277335.0], y=[1495.0] (must be same and length>=4)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | could have reported an average CPU frequency of 2774 MHz (4 samples)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . Timing measurements:
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . get job = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . initial setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload setup = 22 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-in = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . payload execution = 38 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . stage-out = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,421 | INFO     | . log creation = 0 s
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | ..............................
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-11 18:05:29] 2026-03-12 01:04:39,422 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7050325348/pilotlog.txt
[2026-03-11 18:05:29] [end log extracts]
[2026-03-11 18:05:29] 2026-03-12 01:04:39,479 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-11 18:05:29] 2026-03-12 01:04:39,480 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | 
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | job summary report
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | --------------------------------------------------
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | PanDA job id: 7050325348
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | task id: 48967011
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-11 18:02:31,528 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | pilot state: failed 
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | transexitcode: 65
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | exeerrorcode: 65
[2026-03-11 18:05:29] 2026-03-12 01:04:40,070 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | exitcode: 65
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | cpuconsumptiontime: 13 s
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | nevents: 0
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | neventsw: 0
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | pid: 4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | pgrp: 4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | corecount: 12
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | event service: False
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | sizes: {0: 2279696, 1: 2261156, 2: 2280241, 12: 2280241, 64: 2303502, 65: 2307954, 66: 2307954, 184: 2308120}
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | --------------------------------------------------
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | 
[2026-03-11 18:05:29] 2026-03-12 01:04:40,071 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | job 7050325348 has completed (purged errors)
[2026-03-11 18:05:29] 2026-03-12 01:04:40,177 | INFO     | overall cleanup function is called
[2026-03-11 18:05:29] 2026-03-12 01:04:41,185 | INFO     | --- collectZombieJob: --- 10, [4002940]
[2026-03-11 18:05:29] 2026-03-12 01:04:41,186 | INFO     | zombie collector waiting for pid 4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:41,186 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 18:05:29] 2026-03-12 01:04:41,186 | INFO     | collected zombie processes
[2026-03-11 18:05:29] 2026-03-12 01:04:41,186 | INFO     | will attempt to kill all subprocesses of pid=4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:41,475 | INFO     | process IDs to be killed: [4002940] (in reverse order)
[2026-03-11 18:05:29] 2026-03-12 01:04:41,551 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 18:05:29] 2026-03-12 01:04:41,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 18:05:29] 2026-03-12 01:04:41,573 | INFO     | did not find any defunct processes belonging to 4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:41,591 | INFO     | did not find any defunct processes belonging to 4002940
[2026-03-11 18:05:29] 2026-03-12 01:04:41,591 | INFO     | ready for new job
[2026-03-11 18:05:29] 2026-03-12 01:04:41,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 18:05:29] 2026-03-12 01:04:41,593 | INFO     | **************************************
[2026-03-11 18:05:29] 2026-03-12 01:04:41,593 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 18:05:29] 2026-03-12 01:04:41,593 | INFO     | **************************************
[2026-03-11 18:05:29] 2026-03-12 01:04:41,599 | INFO     | 
[2026-03-11 18:05:29] 2026-03-12 01:04:41,601 | INFO     | architecture information:
[2026-03-11 18:05:29] 2026-03-12 01:04:41,603 | INFO     | executing command: cat /etc/os-release
[2026-03-11 18:05:29] 2026-03-12 01:04:41,654 | INFO     | cat /etc/os-release:
[2026-03-11 18:05:29] NAME="CentOS Linux"
[2026-03-11 18:05:29] VERSION="7 (Core)"
[2026-03-11 18:05:29] ID="centos"
[2026-03-11 18:05:29] ID_LIKE="rhel fedora"
[2026-03-11 18:05:29] VERSION_ID="7"
[2026-03-11 18:05:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 18:05:29] ANSI_COLOR="0;31"
[2026-03-11 18:05:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 18:05:29] HOME_URL="https://www.centos.org/"
[2026-03-11 18:05:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 18:05:29] 
[2026-03-11 18:05:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 18:05:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 18:05:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 18:05:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 18:05:29] 
[2026-03-11 18:05:29] 2026-03-12 01:04:41,654 | INFO     | **************************************
[2026-03-11 18:05:29] 2026-03-12 01:04:42,158 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-11 18:05:29] 2026-03-12 01:04:42,185 | INFO     | sufficient remaining disk space (1969160716288 B)
[2026-03-11 18:05:29] 2026-03-12 01:04:42,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 18:05:29] 2026-03-12 01:04:42,185 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 18:05:29] 2026-03-12 01:04:42,185 | INFO     | update_server=False
[2026-03-11 18:05:29] 2026-03-12 01:04:42,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 18:05:29] 2026-03-12 01:04:42,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 18:05:29] 2026-03-12 01:04:42,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 18:05:29] 2026-03-12 01:04:42,209 | INFO     | all data control threads have been joined
[2026-03-11 18:05:29] 2026-03-12 01:04:42,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 18:05:29] 2026-03-12 01:04:42,283 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 18:05:29] 2026-03-12 01:04:42,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:05:29] 2026-03-12 01:04:42,283 | INFO     | will abort loop
[2026-03-11 18:05:29] 2026-03-12 01:04:42,441 | INFO     | all job control threads have been joined
[2026-03-11 18:05:29] 2026-03-12 01:04:42,995 | INFO     | all payload control threads have been joined
[2026-03-11 18:05:29] 2026-03-12 01:04:43,203 | INFO     | [job] retrieve thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,216 | INFO     | [data] control thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,290 | INFO     | [job] job monitor thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,429 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,435 | INFO     | [payload] validate_post thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,436 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,446 | INFO     | [job] control thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,641 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,828 | INFO     | [payload] failed_post thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:43,967 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:44,001 | INFO     | [payload] control thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:44,201 | INFO     | [data] copytool_out thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:44,274 | INFO     | [job] validate thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:44,404 | INFO     | [data] copytool_in thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:44,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 18:05:29] 2026-03-12 01:04:45,622 | INFO     | [job] queue monitor thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:04:46,195 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 18:05:29] 2026-03-12 01:05:12,067 | INFO     | PID=3998226 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 18:05:29] 2026-03-12 01:05:12,067 | INFO     | .. there are 35 such processes running
[2026-03-11 18:05:29] 2026-03-12 01:05:12,068 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 18:05:29] 2026-03-12 01:05:12,068 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 18:05:29] 2026-03-12 01:05:12,068 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 18:05:29] 2026-03-12 01:05:23,216 | INFO     | [monitor] cgroup control has ended
[2026-03-11 18:05:29] 2026-03-12 01:05:24,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140204215482176)>', '<ExcThread(monitor, started 140203201115904)>']
[2026-03-11 18:05:29] 2026-03-12 01:05:24,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 18:05:29] 2026-03-12 01:05:24,149 | INFO     | [monitor] control thread has ended
[2026-03-11 18:05:29] 2026-03-12 01:05:29,053 | INFO     | all workflow threads have been joined
[2026-03-11 18:05:29] 2026-03-12 01:05:29,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 18:05:29] 2026-03-12 01:05:29,054 | INFO     | traces error code: 0
[2026-03-11 18:05:29] 2026-03-12 01:05:29,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 18:05:29] 2026-03-12 01:05:29,180 [wrapper] ==== pilot stdout END ====
[2026-03-11 18:05:29] 2026-03-12 01:05:29,182 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 18:05:29] 2026-03-12 01:05:29,184 [wrapper] pilotpid: 3998226
[2026-03-11 18:05:29] 2026-03-12 01:05:29,186 [wrapper] Pilot exit status: 0
[2026-03-11 18:05:29] 2026-03-12 01:05:29,222 [wrapper] pandaids: 7050325348
[2026-03-11 18:05:29] 2026-03-12 01:05:29,268 [wrapper] cleanup supervisor_pilot 3998232 3998227
[2026-03-11 18:05:29] 2026-03-12 01:05:29,287 [wrapper] Test setup, not cleaning
[2026-03-11 18:05:29] 2026-03-12 01:05:29,289 [wrapper] apfmon messages muted
[2026-03-11 18:05:29] 2026-03-12 01:05:29,291 [wrapper] ==== wrapper stdout END ====
[2026-03-11 18:05:29] 2026-03-12 01:05:29,292 [wrapper] ==== wrapper stderr END ====
[2026-03-11 18:05:29]  *** Error codes and diagnostics ***
[2026-03-11 18:05:29]     "exeErrorCode": 65,
[2026-03-11 18:05:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-11 18:05:29]     "pilotErrorCode": 1305,
[2026-03-11 18:05:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-11 18:05:29]  *** Listing of results directory ***
[2026-03-11 18:05:29] total 215100
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc    585013 Mar 11 12:56 pilot3.tar.gz
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc      5111 Mar 11 13:41 queuedata.json
[2026-03-11 18:05:29] -rwx------. 1 boinc boinc     36322 Mar 11 13:42 runpilot2-wrapper.sh
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc       100 Mar 11 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 18:05:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 18:00 run_atlas
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc       105 Mar 11 18:00 job.xml
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc 216120340 Mar 11 18:00 EVNT.48967008._000261.pool.root.1
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc     15845 Mar 11 18:00 start_atlas.sh
[2026-03-11 18:05:29] drwxrwx--x. 2 boinc boinc      4096 Mar 11 18:00 shared
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc    597518 Mar 11 18:00 input.tar.gz
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc      6593 Mar 11 18:00 init_data.xml
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc         0 Mar 11 18:00 boinc_lockfile
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc      2561 Mar 11 18:00 pandaJob.out
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc   1006227 Mar 11 18:01 agis_schedconf.cvmfs.json
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc   1511578 Mar 11 18:01 agis_ddmendpoints.agis.ALL.json
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc       445 Mar 11 18:01 workernode_map.json
[2026-03-11 18:05:29] drwx------. 5 boinc boinc      4096 Mar 11 18:01 pilot3
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc       523 Mar 11 18:02 boinc_task_state.xml
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc       948 Mar 11 18:02 memory_monitor_summary.json
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc     21616 Mar 11 18:02 log.48967011._014049.job.log.tgz.1
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc      7023 Mar 11 18:04 heartbeat.json
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc        95 Mar 11 18:05 pilot_heartbeat.json
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc      8192 Mar 11 18:05 boinc_mmap_file
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc        22 Mar 11 18:05 wrapper_checkpoint.txt
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc      5005 Mar 11 18:05 pilotlog.txt
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc     85556 Mar 11 18:05 log.48967011._014049.job.log.1
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc       188 Mar 11 18:05 output.list
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc       620 Mar 11 18:05 runtime_log
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc    122880 Mar 11 18:05 result.tar.gz
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc      8635 Mar 11 18:05 runtime_log.err
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc       643 Mar 11 18:05 GE4NDm5YfK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2xkLDmmkoeIm.diag
[2026-03-11 18:05:29] -rw-r--r--. 1 boinc boinc     21823 Mar 11 18:05 stderr.txt
[2026-03-11 18:05:29] No HITS result produced
[2026-03-11 18:05:29]  *** Contents of shared directory: ***
[2026-03-11 18:05:29] total 211780
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc 216120340 Mar 11 18:00 ATLAS.root_0
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc     15845 Mar 11 18:00 start_atlas.sh
[2026-03-11 18:05:29] -rw-r--r--. 2 boinc boinc    597518 Mar 11 18:00 input.tar.gz
[2026-03-11 18:05:29] -rw-------. 1 boinc boinc    122880 Mar 11 18:05 result.tar.gz
18:05:31 (3994479): run_atlas exited; CPU time 20.254341
18:05:31 (3994479): called boinc_finish(0)

</stderr_txt>
]]>

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