Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:46:21 (31544): wrapper (7.7.26015): starting
23:46:21 (31544): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 23:46:21] Arguments: --nthreads 8
[2026-03-11 23:46:21] Threads: 8
[2026-03-11 23:46:21] Checking for CVMFS
[2026-03-11 23:46:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 23:46:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 23:46:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 23:46:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 23:46:21] 2.11.0.0 4324 217313 99652 157173 1 1 2523556 4096000 0 130560 6 21146900 99.681 14348226 476 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-11 23:46:21] CVMFS is ok
[2026-03-11 23:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 23:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 23:46:21] Further information can be found at the LHC@home message board.
[2026-03-11 23:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 23:46:21] Checking for apptainer binary...
[2026-03-11 23:46:21] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-11 23:46:21] apptainer is not installed, using version from CVMFS
[2026-03-11 23:46:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 23:46:22] WARNING: Environment variable TMPDIR already has value [/tmp/job_11295025/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node291
[2026-03-11 23:46:22] apptainer works
[2026-03-11 23:46:22] Set ATHENA_PROC_NUMBER=8
[2026-03-11 23:46:22] Set ATHENA_CORE_NUMBER=8
[2026-03-11 23:46:22] Starting ATLAS job with PandaID=7036391763
[2026-03-11 23:46:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11295025/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 01:36:04]  *** The last 200 lines of the pilot log: ***
[2026-03-12 01:36:04] 2026-03-12 00:35:30,842 | INFO     | time since job start (6537s) is within the limit (349056.0s)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,932 | INFO     | job 7036391763 has state=finished
[2026-03-12 01:36:04] 2026-03-12 00:35:31,932 | INFO     | preparing for final server update for job 7036391763 in state='finished'
[2026-03-12 01:36:04] 2026-03-12 00:35:31,933 | INFO     | reading metadata from: /tmp/job_11295025/atlas/pilot/slots/0/PanDA_Pilot-7036391763/jobReport.json
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | added worker_node to metadata from /tmp/job_11295025/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | this job has now completed (state=finished)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | log transfer has been attempted: DONE
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | job 7036391763 has finished - writing final server update
[2026-03-12 01:36:04] 2026-03-12 00:35:31,934 | INFO     | total number of processed events: 400 (read)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | INFO     | using path: /tmp/job_11295025/atlas/pilot/slots/0/PanDA_Pilot-7036391763/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | INFO     | extracted standard info from prmon json
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 01:36:04] 2026-03-12 00:35:31,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 01:36:04] 2026-03-12 00:35:31,953 | INFO     | fitting pss+swap vs Time
[2026-03-12 01:36:04] 2026-03-12 00:35:31,953 | INFO     | sum of square deviations: 379820541.8504669
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | sum of deviations: -9540117169.60748
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | mean x: 1773272442.037383
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | mean y: 2598789.4018691587
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | intersect: 44542651279.06641
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | chi2: 1.2966800127416422
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | sum of square deviations: 329020809.3431378
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | sum of deviations: -8862229299.441177
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | mean x: 1773272289.5392158
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | mean y: 2600826.7352941176
[2026-03-12 01:36:04] 2026-03-12 00:35:31,954 | INFO     | intersect: 47765979901.80211
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | chi2: 1.2920501436457976
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | current chi2=1.2920501436457976 (change=0.3570556382723468 %)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | right removable region: 101
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | sum of square deviations: 329018369.3431378
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | sum of deviations: -18682138570.22549
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | mean x: 1773272594.5392158
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | mean y: 2625122.931372549
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | intersect: 100691606106.28406
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | chi2: 0.1914741484638451
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | current chi2=0.1914741484638451 (change=85.23350814523617 %)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,955 | INFO     | sum of square deviations: 282960471.8350511
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | sum of deviations: -13697065827.81444
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | mean x: 1773272747.041237
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | mean y: 2608569.4536082475
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | intersect: 85840158208.0193
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | chi2: 0.17320038410556496
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | current chi2=0.17320038410556496 (change=9.543724050941883 %)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | left removable region: 20
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | sum of square deviations: 164750767.8024692
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | sum of deviations: -2017625075.2592595
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | mean x: 1773272869.0493827
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | mean y: 2564041.814814815
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | intersect: 21719001868.439266
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | chi2: 0.027977435166370693
[2026-03-12 01:36:04] 2026-03-12 00:35:31,956 | INFO     | current memory leak: -12.25 B/s (using 81 data points, chi2=0.03)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | could have reported an average CPU frequency of 2380 MHz (7 samples)
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | ..............................
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . Timing measurements:
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . get job = 0 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . initial setup = 2 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . payload setup = 2 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . stage-in = 0 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . payload execution = 6518 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . stage-out = 0 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | . log creation = 0 s
[2026-03-12 01:36:04] 2026-03-12 00:35:31,957 | INFO     | ..............................
[2026-03-12 01:36:04] 2026-03-12 00:35:32,006 | INFO     | 
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | job summary report
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | --------------------------------------------------
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | PanDA job id: 7036391763
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | task id: 48851161
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | errors: (none)
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | pilot state: finished 
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | transexitcode: 0
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | exeerrorcode: 0
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | exeerrordiag: 
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | exitcode: 0
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | exitmsg: OK
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | cpuconsumptiontime: 43195 s
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | nevents: 400
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | neventsw: 0
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | pid: 7800
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | pgrp: 7800
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | corecount: 8
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | event service: False
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | sizes: {0: 2280445, 11: 2280445, 6524: 2307733, 6526: 2316817, 6528: 2316955}
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | --------------------------------------------------
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | 
[2026-03-12 01:36:04] 2026-03-12 00:35:32,007 | INFO     | executing command: ls -lF /tmp/job_11295025/atlas/pilot/slots/0
[2026-03-12 01:36:04] 2026-03-12 00:35:32,017 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | job 7036391763 has completed (purged errors)
[2026-03-12 01:36:04] 2026-03-12 00:35:32,018 | INFO     | overall cleanup function is called
[2026-03-12 01:36:04] 2026-03-12 00:35:33,024 | INFO     | --- collectZombieJob: --- 10, [7800]
[2026-03-12 01:36:04] 2026-03-12 00:35:33,024 | INFO     | zombie collector waiting for pid 7800
[2026-03-12 01:36:04] 2026-03-12 00:35:33,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 01:36:04] 2026-03-12 00:35:33,024 | INFO     | collected zombie processes
[2026-03-12 01:36:04] 2026-03-12 00:35:33,024 | INFO     | will attempt to kill all subprocesses of pid=7800
[2026-03-12 01:36:04] 2026-03-12 00:35:33,131 | INFO     | process IDs to be killed: [7800] (in reverse order)
[2026-03-12 01:36:04] 2026-03-12 00:35:33,169 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 01:36:04] 2026-03-12 00:35:33,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 01:36:04] 2026-03-12 00:35:33,174 | INFO     | did not find any defunct processes belonging to 7800
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | did not find any defunct processes belonging to 7800
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | ready for new job
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | **************************************
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 01:36:04] 2026-03-12 00:35:33,178 | INFO     | **************************************
[2026-03-12 01:36:04] 2026-03-12 00:35:33,179 | INFO     | 
[2026-03-12 01:36:04] 2026-03-12 00:35:33,192 | INFO     | architecture information:
[2026-03-12 01:36:04] 2026-03-12 00:35:33,192 | INFO     | executing command: cat /etc/os-release
[2026-03-12 01:36:04] 2026-03-12 00:35:33,198 | INFO     | cat /etc/os-release:
[2026-03-12 01:36:04] NAME="CentOS Linux"
[2026-03-12 01:36:04] VERSION="7 (Core)"
[2026-03-12 01:36:04] ID="centos"
[2026-03-12 01:36:04] ID_LIKE="rhel fedora"
[2026-03-12 01:36:04] VERSION_ID="7"
[2026-03-12 01:36:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 01:36:04] ANSI_COLOR="0;31"
[2026-03-12 01:36:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 01:36:04] HOME_URL="https://www.centos.org/"
[2026-03-12 01:36:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 01:36:04] 
[2026-03-12 01:36:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 01:36:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 01:36:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 01:36:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 01:36:04] 
[2026-03-12 01:36:04] 2026-03-12 00:35:33,198 | INFO     | **************************************
[2026-03-12 01:36:04] 2026-03-12 00:35:33,701 | INFO     | executing command: df -mP /tmp/job_11295025/atlas/pilot/slots/0
[2026-03-12 01:36:04] 2026-03-12 00:35:33,707 | INFO     | sufficient remaining disk space (224340738048 B)
[2026-03-12 01:36:04] 2026-03-12 00:35:33,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 01:36:04] 2026-03-12 00:35:33,707 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 01:36:04] 2026-03-12 00:35:33,707 | INFO     | update_server=False
[2026-03-12 01:36:04] 2026-03-12 00:35:33,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 01:36:04] 2026-03-12 00:35:33,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:36:04] 2026-03-12 00:35:33,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 01:36:04] 2026-03-12 00:35:34,011 | INFO     | all data control threads have been joined
[2026-03-12 01:36:04] 2026-03-12 00:35:34,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:36:04] 2026-03-12 00:35:34,078 | INFO     | aborting loop
[2026-03-12 01:36:04] 2026-03-12 00:35:34,193 | INFO     | all payload control threads have been joined
[2026-03-12 01:36:04] 2026-03-12 00:35:34,444 | INFO     | all job control threads have been joined
[2026-03-12 01:36:04] 2026-03-12 00:35:34,708 | INFO     | [job] retrieve thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:34,713 | INFO     | [job] queue monitor thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,016 | INFO     | [data] control thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,084 | INFO     | [job] job monitor thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,198 | INFO     | [payload] control thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,283 | INFO     | [payload] failed_post thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,449 | INFO     | [job] control thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,477 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,584 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,682 | INFO     | [data] copytool_in thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,700 | INFO     | [job] validate thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,713 | INFO     | [data] copytool_out thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,917 | INFO     | [payload] validate_post thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:35,917 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:36,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 01:36:04] 2026-03-12 00:35:40,139 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:42,426 | INFO     | [monitor] cgroup control has ended
[2026-03-12 01:36:04] 2026-03-12 00:35:44,662 | INFO     | job.realtimelogging is not enabled
[2026-03-12 01:36:04] 2026-03-12 00:35:45,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 01:36:04] 2026-03-12 00:35:46,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-12 01:36:04] 2026-03-12 00:35:51,918 | INFO     | all workflow threads have been joined
[2026-03-12 01:36:04] 2026-03-12 00:35:51,919 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 01:36:04] 2026-03-12 00:35:51,919 | INFO     | traces error code: 0
[2026-03-12 01:36:04] 2026-03-12 00:35:51,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 01:36:04] 2026-03-12 00:36:04,035 | INFO     | PID=3127 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | INFO     | .. there are 5 such processes running
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 01:36:04] 2026-03-12 00:36:04,036 | INFO     | [monitor] control thread has ended
[2026-03-12 01:36:04] 2026-03-12 00:36:04,097 [wrapper] ==== pilot stdout END ====
[2026-03-12 01:36:04] 2026-03-12 00:36:04,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 01:36:04] 2026-03-12 00:36:04,100 [wrapper] pilotpid: 3127
[2026-03-12 01:36:04] 2026-03-12 00:36:04,100 [wrapper] Pilot exit status: 0
[2026-03-12 01:36:04] 2026-03-12 00:36:04,105 [wrapper] pandaids: 7036391763
[2026-03-12 01:36:04] 2026-03-12 00:36:04,128 [wrapper] cleanup supervisor_pilot  1604 3128
[2026-03-12 01:36:04] 2026-03-12 00:36:04,129 [wrapper] Test setup, not cleaning
[2026-03-12 01:36:04] 2026-03-12 00:36:04,130 [wrapper] apfmon messages muted
[2026-03-12 01:36:04] 2026-03-12 00:36:04,131 [wrapper] ==== wrapper stdout END ====
[2026-03-12 01:36:04] 2026-03-12 00:36:04,132 [wrapper] ==== wrapper stderr END ====
[2026-03-12 01:36:04]  *** Error codes and diagnostics ***
[2026-03-12 01:36:04]     "exeErrorCode": 0,
[2026-03-12 01:36:04]     "exeErrorDiag": "",
[2026-03-12 01:36:04]     "pilotErrorCode": 0,
[2026-03-12 01:36:04]     "pilotErrorDiag": "",
[2026-03-12 01:36:04]  *** Listing of results directory ***
[2026-03-12 01:36:04] total 476320
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user    584627 Mar  3 18:25 pilot3.tar.gz
[2026-03-12 01:36:04] -rwx------ 1 mf493845 unix-user     36322 Mar  3 18:26 runpilot2-wrapper.sh
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      5111 Mar  3 18:27 queuedata.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       100 Mar 11 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 01:36:04] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 11 22:45 run_atlas
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       105 Mar 11 22:45 job.xml
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user 239927379 Mar 11 23:46 EVNT.48459762._000003.pool.root.1
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 11 23:46 start_atlas.sh
[2026-03-12 01:36:04] drwxrwx--x 2 mf493845 unix-user       100 Mar 11 23:46 shared
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user    597966 Mar 11 23:46 input.tar.gz
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      6389 Mar 11 23:46 init_data.xml
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user         0 Mar 11 23:46 boinc_setup_complete
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      8192 Mar 11 23:46 boinc_mmap_file
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user         0 Mar 11 23:46 boinc_lockfile
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      2626 Mar 11 23:46 pandaJob.out
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user   1006243 Mar 11 23:46 agis_schedconf.cvmfs.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user   1511578 Mar 11 23:46 agis_ddmendpoints.agis.ALL.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       412 Mar 11 23:46 workernode_map.json
[2026-03-12 01:36:04] drwx------ 5 mf493845 unix-user       440 Mar 11 23:46 pilot3
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user 241268824 Mar 12 01:35 HITS.48851161._000068.pool.root.1
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      1017 Mar 12 01:35 memory_monitor_summary.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user        95 Mar 12 01:35 pilot_heartbeat.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user    357321 Mar 12 01:35 log.48851161._000068.job.log.tgz.1
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      6300 Mar 12 01:35 heartbeat.json
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       819 Mar 12 01:36 pilotlog.txt
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user    964153 Mar 12 01:36 log.48851161._000068.job.log.1
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       357 Mar 12 01:36 output.list
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       620 Mar 12 01:36 runtime_log
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user   1341440 Mar 12 01:36 result.tar.gz
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user      9219 Mar 12 01:36 runtime_log.err
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user       646 Mar 12 01:36 KPMLDmFhiH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGFHLDmRqR9hm.diag
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user     21746 Mar 12 01:36 stderr.txt
[2026-03-12 01:36:04] HITS file was successfully produced:
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user 241268824 Mar 12 01:35 shared/HITS.pool.root.1
[2026-03-12 01:36:04]  *** Contents of shared directory: ***
[2026-03-12 01:36:04] total 471836
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user 239927379 Mar 11 23:46 ATLAS.root_0
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 11 23:46 start_atlas.sh
[2026-03-12 01:36:04] -rw-r--r-- 2 mf493845 unix-user    597966 Mar 11 23:46 input.tar.gz
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user 241268824 Mar 12 01:35 HITS.pool.root.1
[2026-03-12 01:36:04] -rw------- 1 mf493845 unix-user   1341440 Mar 12 01:36 result.tar.gz
01:36:06 (31544): run_atlas exited; CPU time 43287.614258
01:36:06 (31544): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN