Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:18:06 (6148): wrapper (7.7.26015): starting
00:18:06 (6148): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:18:06] Arguments: --nthreads 8
[2026-03-12 00:18:06] Threads: 8
[2026-03-12 00:18:06] Checking for CVMFS
[2026-03-12 00:18:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:18:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:18:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:18:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:18:07] 2.11.0.0 4333 140555 102284 157176 0 9 3894230 4096000 2751 130560 4 12197409 99.626 8252144 344 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 00:18:07] CVMFS is ok
[2026-03-12 00:18:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:18:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:18:07] Further information can be found at the LHC@home message board.
[2026-03-12 00:18:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:18:07] Checking for apptainer binary...
[2026-03-12 00:18:07] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 00:18:07] apptainer is not installed, using version from CVMFS
[2026-03-12 00:18:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:18:07] WARNING: Environment variable TMPDIR already has value [/tmp/job_11294975/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node176
[2026-03-12 00:18:07] apptainer works
[2026-03-12 00:18:07] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:18:07] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:18:07] Starting ATLAS job with PandaID=7036326003
[2026-03-12 00:18:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11294975/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 01:28:25]  *** The last 200 lines of the pilot log: ***
[2026-03-12 01:28:25]  direct_access_lan=False
[2026-03-12 01:28:25]  direct_access_wan=False
[2026-03-12 01:28:25]  domain=
[2026-03-12 01:28:25]  filesize=323068
[2026-03-12 01:28:25]  filetype=log
[2026-03-12 01:28:25]  guid=01790c3b-d2df-4cde-8fc5-9d9342fad519
[2026-03-12 01:28:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 01:28:25]  is_altstaged=None
[2026-03-12 01:28:25]  is_tar=False
[2026-03-12 01:28:25]  lfn=log.48841707._002438.job.log.tgz.1
[2026-03-12 01:28:25]  mtime=0
[2026-03-12 01:28:25]  protocol_id=None
[2026-03-12 01:28:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 01:28:25]  replicas=None
[2026-03-12 01:28:25]  scope=mc23_13p6TeV
[2026-03-12 01:28:25]  status=None
[2026-03-12 01:28:25]  status_code=0
[2026-03-12 01:28:25]  storage_token=
[2026-03-12 01:28:25]  surl=/tmp/job_11294975/atlas/pilot/slots/0/PanDA_Pilot-7036326003/log.48841707._002438.job.log.tgz.1
[2026-03-12 01:28:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/3d/log.48841707._002438.job.log.tgz.1
[2026-03-12 01:28:25]  workdir=None
[2026-03-12 01:28:25] ]
[2026-03-12 01:28:25] 2026-03-12 00:27:41,774 | INFO     | transferring file log.48841707._002438.job.log.tgz.1 from /tmp/job_11294975/atlas/pilot/slots/0/PanDA_Pilot-7036326003/log.48841707._002438.job.log.tgz.1 to /tmp/j
[2026-03-12 01:28:25] 2026-03-12 00:27:41,774 | INFO     | executing command: /usr/bin/env mv /tmp/job_11294975/atlas/pilot/slots/0/PanDA_Pilot-7036326003/log.48841707._002438.job.log.tgz.1 /tmp/job_11294975/atlas/pilot/sl
[2026-03-12 01:28:25] 2026-03-12 00:27:41,782 | INFO     | adding to output.list: log.48841707._002438.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/3d/log.48841707._002438.job.log.tg
[2026-03-12 01:28:25] 2026-03-12 00:27:41,782 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 01:28:25] 2026-03-12 00:27:41,782 | INFO     | summary of transferred files:
[2026-03-12 01:28:25] 2026-03-12 00:27:41,782 | INFO     |  -- lfn=log.48841707._002438.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 01:28:25] 2026-03-12 00:27:41,782 | INFO     | stage-out finished correctly
[2026-03-12 01:28:25] 2026-03-12 00:27:42,221 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 01:28:25] 2026-03-12 00:27:42,266 | INFO     | job 7036326003 has state=finished
[2026-03-12 01:28:25] 2026-03-12 00:27:42,266 | INFO     | preparing for final server update for job 7036326003 in state='finished'
[2026-03-12 01:28:25] 2026-03-12 00:27:42,266 | INFO     | reading metadata from: /tmp/job_11294975/atlas/pilot/slots/0/PanDA_Pilot-7036326003/jobReport.json
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | added worker_node to metadata from /tmp/job_11294975/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | this job has now completed (state=finished)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | log transfer has been attempted: DONE
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | job 7036326003 has finished - writing final server update
[2026-03-12 01:28:25] 2026-03-12 00:27:42,267 | INFO     | total number of processed events: 400 (read)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,285 | INFO     | using path: /tmp/job_11294975/atlas/pilot/slots/0/PanDA_Pilot-7036326003/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,285 | INFO     | extracted standard info from prmon json
[2026-03-12 01:28:25] 2026-03-12 00:27:42,285 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 01:28:25] 2026-03-12 00:27:42,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 01:28:25] 2026-03-12 00:27:42,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 01:28:25] 2026-03-12 00:27:42,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 01:28:25] 2026-03-12 00:27:42,286 | INFO     | fitting pss+swap vs Time
[2026-03-12 01:28:25] 2026-03-12 00:27:42,286 | INFO     | sum of square deviations: 73882315.5
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | sum of deviations: -8613262586.0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | mean x: 1773273274.5
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | mean y: 2839363.8387096776
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | intersect: 206732531667.60196
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | chi2: 0.04085027332254397
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | current memory leak: -116.58 B/s (using 62 data points, chi2=0.04)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | could have reported an average CPU frequency of 2707 MHz (6 samples)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | ..............................
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . Timing measurements:
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . get job = 0 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . initial setup = 2 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . payload setup = 2 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . stage-in = 0 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . payload execution = 4150 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . stage-out = 0 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | . log creation = 0 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,287 | INFO     | ..............................
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | 
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | job summary report
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | --------------------------------------------------
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | PanDA job id: 7036326003
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | task id: 48841707
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | errors: (none)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | pilot state: finished 
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | transexitcode: 0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | exeerrorcode: 0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | exeerrordiag: 
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | exitcode: 0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | exitmsg: OK
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | cpuconsumptiontime: 27983 s
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | nevents: 400
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | neventsw: 0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | pid: 14665
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | pgrp: 14665
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | corecount: 8
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | event service: False
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | sizes: {0: 2280210, 10: 2280210, 4155: 2306317, 4156: 2315400, 4157: 2315594}
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | --------------------------------------------------
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | 
[2026-03-12 01:28:25] 2026-03-12 00:27:42,811 | INFO     | executing command: ls -lF /tmp/job_11294975/atlas/pilot/slots/0
[2026-03-12 01:28:25] 2026-03-12 00:27:42,820 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | job 7036326003 has completed (purged errors)
[2026-03-12 01:28:25] 2026-03-12 00:27:42,821 | INFO     | overall cleanup function is called
[2026-03-12 01:28:25] 2026-03-12 00:27:43,827 | INFO     | --- collectZombieJob: --- 10, [14665]
[2026-03-12 01:28:25] 2026-03-12 00:27:43,827 | INFO     | zombie collector waiting for pid 14665
[2026-03-12 01:28:25] 2026-03-12 00:27:43,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 01:28:25] 2026-03-12 00:27:43,828 | INFO     | collected zombie processes
[2026-03-12 01:28:25] 2026-03-12 00:27:43,828 | INFO     | will attempt to kill all subprocesses of pid=14665
[2026-03-12 01:28:25] 2026-03-12 00:27:43,917 | INFO     | process IDs to be killed: [14665] (in reverse order)
[2026-03-12 01:28:25] 2026-03-12 00:27:43,948 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 01:28:25] 2026-03-12 00:27:43,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 01:28:25] 2026-03-12 00:27:43,952 | INFO     | did not find any defunct processes belonging to 14665
[2026-03-12 01:28:25] 2026-03-12 00:27:43,955 | INFO     | did not find any defunct processes belonging to 14665
[2026-03-12 01:28:25] 2026-03-12 00:27:43,955 | INFO     | ready for new job
[2026-03-12 01:28:25] 2026-03-12 00:27:43,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 01:28:25] 2026-03-12 00:27:43,956 | INFO     | **************************************
[2026-03-12 01:28:25] 2026-03-12 00:27:43,956 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 01:28:25] 2026-03-12 00:27:43,956 | INFO     | **************************************
[2026-03-12 01:28:25] 2026-03-12 00:27:43,956 | INFO     | 
[2026-03-12 01:28:25] 2026-03-12 00:27:43,970 | INFO     | architecture information:
[2026-03-12 01:28:25] 2026-03-12 00:27:43,970 | INFO     | executing command: cat /etc/os-release
[2026-03-12 01:28:25] 2026-03-12 00:27:43,977 | INFO     | cat /etc/os-release:
[2026-03-12 01:28:25] NAME="CentOS Linux"
[2026-03-12 01:28:25] VERSION="7 (Core)"
[2026-03-12 01:28:25] ID="centos"
[2026-03-12 01:28:25] ID_LIKE="rhel fedora"
[2026-03-12 01:28:25] VERSION_ID="7"
[2026-03-12 01:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 01:28:25] ANSI_COLOR="0;31"
[2026-03-12 01:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 01:28:25] HOME_URL="https://www.centos.org/"
[2026-03-12 01:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 01:28:25] 
[2026-03-12 01:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 01:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 01:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 01:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 01:28:25] 
[2026-03-12 01:28:25] 2026-03-12 00:27:43,977 | INFO     | **************************************
[2026-03-12 01:28:25] 2026-03-12 00:27:44,480 | INFO     | executing command: df -mP /tmp/job_11294975/atlas/pilot/slots/0
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | INFO     | sufficient remaining disk space (225591689216 B)
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | INFO     | update_server=False
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 01:28:25] 2026-03-12 00:27:44,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:28:25] 2026-03-12 00:27:44,487 | INFO     | aborting loop
[2026-03-12 01:28:25] 2026-03-12 00:27:44,762 | INFO     | all payload control threads have been joined
[2026-03-12 01:28:25] 2026-03-12 00:27:44,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 01:28:25] 2026-03-12 00:27:44,989 | INFO     | all job control threads have been joined
[2026-03-12 01:28:25] 2026-03-12 00:27:45,220 | INFO     | all data control threads have been joined
[2026-03-12 01:28:25] 2026-03-12 00:27:45,491 | INFO     | [job] retrieve thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,492 | INFO     | [job] job monitor thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,568 | INFO     | [payload] validate_post thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,767 | INFO     | [payload] control thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,773 | INFO     | [data] copytool_in thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,802 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:45,994 | INFO     | [job] control thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,225 | INFO     | [data] control thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,469 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,843 | INFO     | [data] copytool_out thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,863 | INFO     | [job] validate thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,864 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:46,912 | INFO     | [payload] failed_post thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:47,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:28:25] 2026-03-12 00:27:48,349 | INFO     | [job] queue monitor thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:48,492 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:27:54,844 | INFO     | job.realtimelogging is not enabled
[2026-03-12 01:28:25] 2026-03-12 00:27:55,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 01:28:25] 2026-03-12 00:28:14,461 | INFO     | PID=10060 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 01:28:25] 2026-03-12 00:28:14,461 | INFO     | .. there are 2 such processes running
[2026-03-12 01:28:25] 2026-03-12 00:28:14,462 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 01:28:25] 2026-03-12 00:28:14,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 01:28:25] 2026-03-12 00:28:14,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 01:28:25] 2026-03-12 00:28:20,199 | INFO     | [monitor] cgroup control has ended
[2026-03-12 01:28:25] 2026-03-12 00:28:20,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061089536)>']
[2026-03-12 01:28:25] 2026-03-12 00:28:21,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 01:28:25] 2026-03-12 00:28:21,497 | INFO     | [monitor] control thread has ended
[2026-03-12 01:28:25] 2026-03-12 00:28:25,681 | INFO     | all workflow threads have been joined
[2026-03-12 01:28:25] 2026-03-12 00:28:25,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 01:28:25] 2026-03-12 00:28:25,682 | INFO     | traces error code: 0
[2026-03-12 01:28:25] 2026-03-12 00:28:25,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 01:28:25] 2026-03-12 00:28:25,735 [wrapper] ==== pilot stdout END ====
[2026-03-12 01:28:25] 2026-03-12 00:28:25,737 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 01:28:25] 2026-03-12 00:28:25,738 [wrapper] pilotpid: 10060
[2026-03-12 01:28:25] 2026-03-12 00:28:25,739 [wrapper] Pilot exit status: 0
[2026-03-12 01:28:25] 2026-03-12 00:28:25,744 [wrapper] pandaids: 7036326003
[2026-03-12 01:28:25] 2026-03-12 00:28:25,765 [wrapper] cleanup supervisor_pilot 12173 10061
[2026-03-12 01:28:25] 2026-03-12 00:28:25,766 [wrapper] Test setup, not cleaning
[2026-03-12 01:28:25] 2026-03-12 00:28:25,767 [wrapper] apfmon messages muted
[2026-03-12 01:28:25] 2026-03-12 00:28:25,769 [wrapper] ==== wrapper stdout END ====
[2026-03-12 01:28:25] 2026-03-12 00:28:25,770 [wrapper] ==== wrapper stderr END ====
[2026-03-12 01:28:25]  *** Error codes and diagnostics ***
[2026-03-12 01:28:25]     "exeErrorCode": 0,
[2026-03-12 01:28:25]     "exeErrorDiag": "",
[2026-03-12 01:28:25]     "pilotErrorCode": 0,
[2026-03-12 01:28:25]     "pilotErrorDiag": "",
[2026-03-12 01:28:25]  *** Listing of results directory ***
[2026-03-12 01:28:25] total 568320
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-12 01:28:25] -rwx------ 1 mf493845 unix-user     36322 Mar  3 17:32 runpilot2-wrapper.sh
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      5111 Mar  3 17:33 queuedata.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       100 Mar 11 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 01:28:25] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 11 22:58 run_atlas
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       105 Mar 11 22:58 job.xml
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user 312288114 Mar 12 00:18 EVNT.48252644._000095.pool.root.1
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 00:18 start_atlas.sh
[2026-03-12 01:28:25] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 00:18 shared
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user    597943 Mar 12 00:18 input.tar.gz
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      6390 Mar 12 00:18 init_data.xml
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user         0 Mar 12 00:18 boinc_setup_complete
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      8192 Mar 12 00:18 boinc_mmap_file
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user         0 Mar 12 00:18 boinc_lockfile
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      2492 Mar 12 00:18 pandaJob.out
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user   1006235 Mar 12 00:18 agis_schedconf.cvmfs.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user   1511578 Mar 12 00:18 agis_ddmendpoints.agis.ALL.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       420 Mar 12 00:18 workernode_map.json
[2026-03-12 01:28:25] drwx------ 5 mf493845 unix-user       440 Mar 12 00:18 pilot3
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user 263836907 Mar 12 01:27 HITS.48841707._002438.pool.root.1
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      1018 Mar 12 01:27 memory_monitor_summary.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user    323068 Mar 12 01:27 log.48841707._002438.job.log.tgz.1
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      6317 Mar 12 01:27 heartbeat.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user        95 Mar 12 01:28 pilot_heartbeat.json
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      4903 Mar 12 01:28 pilotlog.txt
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user    638966 Mar 12 01:28 log.48841707._002438.job.log.1
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       357 Mar 12 01:28 output.list
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       620 Mar 12 01:28 runtime_log
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user    983040 Mar 12 01:28 result.tar.gz
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user       645 Mar 12 01:28 TkVKDmmqhH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmY0ELDmBiPQFn.diag
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user      9219 Mar 12 01:28 runtime_log.err
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user     21422 Mar 12 01:28 stderr.txt
[2026-03-12 01:28:25] HITS file was successfully produced:
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user 263836907 Mar 12 01:27 shared/HITS.pool.root.1
[2026-03-12 01:28:25]  *** Contents of shared directory: ***
[2026-03-12 01:28:25] total 564188
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user 312288114 Mar 12 00:18 ATLAS.root_0
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 00:18 start_atlas.sh
[2026-03-12 01:28:25] -rw-r--r-- 2 mf493845 unix-user    597943 Mar 12 00:18 input.tar.gz
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user 263836907 Mar 12 01:27 HITS.pool.root.1
[2026-03-12 01:28:25] -rw------- 1 mf493845 unix-user    983040 Mar 12 01:28 result.tar.gz
01:28:27 (6148): run_atlas exited; CPU time 28035.279435
01:28:27 (6148): called boinc_finish(0)

</stderr_txt>
]]>

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