Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:43:46 (994035): wrapper (7.7.26015): starting
16:43:46 (994035): wrapper: running run_atlas (--nthreads 11)
[2026-03-11 16:43:47] Arguments: --nthreads 11
[2026-03-11 16:43:47] Threads: 11
[2026-03-11 16:43:47] Checking for CVMFS
[2026-03-11 16:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 16:43:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 16:43:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 16:43:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 16:43:49] 2.13.3.0 17216 181610 834448 157170 0 451 17051215 32935937 54230 16776704 0 2440563710 99.658 2228147555 48059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 16:43:49] CVMFS is ok
[2026-03-11 16:43:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 16:43:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 16:43:49] Further information can be found at the LHC@home message board.
[2026-03-11 16:43:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 16:43:49] Checking for apptainer binary...
[2026-03-11 16:43:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 16:43:49] Running /usr/bin/apptainer --version
[2026-03-11 16:43:49] apptainer version 1.4.5-2.el9
[2026-03-11 16:43:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 16:43:50] c7-9-14.aglt2.org
[2026-03-11 16:43:50] apptainer works
[2026-03-11 16:43:50] Set ATHENA_PROC_NUMBER=11
[2026-03-11 16:43:50] Set ATHENA_CORE_NUMBER=11
[2026-03-11 16:43:50] Starting ATLAS job with PandaID=7036369922
[2026-03-11 16:43:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 19:21:08]  *** The last 200 lines of the pilot log: ***
[2026-03-11 19:21:08] 2026-03-11 23:20:22,422 | INFO     | log transfer has been attempted: DONE
[2026-03-11 19:21:08] 2026-03-11 23:20:22,422 | INFO     | job 7036369922 has finished - writing final server update
[2026-03-11 19:21:08] 2026-03-11 23:20:22,422 | INFO     | total number of processed events: 400 (read)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,501 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7036369922/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,501 | INFO     | extracted standard info from prmon json
[2026-03-11 19:21:08] 2026-03-11 23:20:22,501 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 19:21:08] 2026-03-11 23:20:22,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 19:21:08] 2026-03-11 23:20:22,509 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 19:21:08] 2026-03-11 23:20:22,509 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 19:21:08] 2026-03-11 23:20:22,511 | INFO     | fitting pss+swap vs Time
[2026-03-11 19:21:08] 2026-03-11 23:20:22,511 | INFO     | sum of square deviations: 1088938605.5526264
[2026-03-11 19:21:08] 2026-03-11 23:20:22,514 | INFO     | sum of deviations: 27536580164.31579
[2026-03-11 19:21:08] 2026-03-11 23:20:22,515 | INFO     | mean x: 1773266603.6710527
[2026-03-11 19:21:08] 2026-03-11 23:20:22,515 | INFO     | mean y: 2620809.5263157897
[2026-03-11 19:21:08] 2026-03-11 23:20:22,515 | INFO     | intersect: -44838931997.67838
[2026-03-11 19:21:08] 2026-03-11 23:20:22,515 | INFO     | chi2: 3.606202297780263
[2026-03-11 19:21:08] 2026-03-11 23:20:22,516 | INFO     | sum of square deviations: 984981795.4013568
[2026-03-11 19:21:08] 2026-03-11 23:20:22,518 | INFO     | sum of deviations: 37149416248.48298
[2026-03-11 19:21:08] 2026-03-11 23:20:22,518 | INFO     | mean x: 1773266451.1768708
[2026-03-11 19:21:08] 2026-03-11 23:20:22,518 | INFO     | mean y: 2634492.7891156464
[2026-03-11 19:21:08] 2026-03-11 23:20:22,518 | INFO     | intersect: -66877600067.68513
[2026-03-11 19:21:08] 2026-03-11 23:20:22,519 | INFO     | chi2: 2.8717855602188465
[2026-03-11 19:21:08] 2026-03-11 23:20:22,519 | INFO     | current chi2=2.8717855602188465 (change=20.365378226658947 %)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,519 | INFO     | right removable region: 146
[2026-03-11 19:21:08] 2026-03-11 23:20:22,519 | INFO     | sum of square deviations: 984965935.4013568
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | sum of deviations: -13027990770.414967
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | mean x: 1773266756.1768708
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | mean y: 2679893.0544217685
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | intersect: 23457402642.975967
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | chi2: 0.8880377728392173
[2026-03-11 19:21:08] 2026-03-11 23:20:22,521 | INFO     | current chi2=0.8880377728392173 (change=75.37471002705993 %)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | sum of square deviations: 887830602.7394401
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | sum of deviations: -17376875447.507042
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | mean x: 1773266908.6830986
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | mean y: 2686554.7887323946
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | intersect: 34709575585.52794
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | chi2: 0.8060848269147322
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | current chi2=0.8060848269147322 (change=9.228542797505867 %)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | left removable region: 20
[2026-03-11 19:21:08] 2026-03-11 23:20:22,522 | INFO     | sum of square deviations: 620246842.5396802
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | sum of deviations: -3265884146.968254
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | mean x: 1773267030.6984127
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | mean y: 2696736.6587301586
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | intersect: 9339761090.241339
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | chi2: 0.014473557311179787
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | current memory leak: -5.27 B/s (using 126 data points, chi2=0.01)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | ..............................
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | . Timing measurements:
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | . get job = 0 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | . initial setup = 30 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | . payload setup = 39 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,523 | INFO     | . stage-in = 0 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,524 | INFO     | . payload execution = 9244 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,524 | INFO     | . stage-out = 1 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,524 | INFO     | . log creation = 0 s
[2026-03-11 19:21:08] 2026-03-11 23:20:22,524 | INFO     | ..............................
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | 
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | job summary report
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | --------------------------------------------------
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | PanDA job id: 7036369922
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | task id: 48838577
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | errors: (none)
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | pilot state: finished 
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | transexitcode: 0
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | exeerrorcode: 0
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | exeerrordiag: 
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | exitcode: 0
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | exitmsg: OK
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | cpuconsumptiontime: 26136 s
[2026-03-11 19:21:08] 2026-03-11 23:20:23,012 | INFO     | nevents: 400
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | neventsw: 0
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | pid: 1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | pgrp: 1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | corecount: 11
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | event service: False
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | sizes: {0: 2279807, 1: 2280268, 9288: 2308452, 9289: 2308451, 9291: 2317505, 9293: 2317561, 9294: 2317947}
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | --------------------------------------------------
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | 
[2026-03-11 19:21:08] 2026-03-11 23:20:23,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,445 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | job 7036369922 has completed (purged errors)
[2026-03-11 19:21:08] 2026-03-11 23:20:23,447 | INFO     | overall cleanup function is called
[2026-03-11 19:21:08] 2026-03-11 23:20:24,462 | INFO     | --- collectZombieJob: --- 10, [1019307]
[2026-03-11 19:21:08] 2026-03-11 23:20:24,462 | INFO     | zombie collector waiting for pid 1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:24,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 19:21:08] 2026-03-11 23:20:24,462 | INFO     | collected zombie processes
[2026-03-11 19:21:08] 2026-03-11 23:20:24,462 | INFO     | will attempt to kill all subprocesses of pid=1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:27,572 | INFO     | PID=1006714 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 19:21:08] 2026-03-11 23:20:27,572 | INFO     | .. there are 92 such processes running
[2026-03-11 19:21:08] 2026-03-11 23:20:27,619 | WARNING  | process 1019307 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 19:21:08] 2026-03-11 23:20:28,109 | INFO     | process IDs to be killed: [1019307] (in reverse order)
[2026-03-11 19:21:08] 2026-03-11 23:20:28,496 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 19:21:08] 2026-03-11 23:20:29,364 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 19:21:08] 2026-03-11 23:20:29,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 19:21:08] 2026-03-11 23:20:29,513 | INFO     | did not find any defunct processes belonging to 1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:29,793 | INFO     | did not find any defunct processes belonging to 1019307
[2026-03-11 19:21:08] 2026-03-11 23:20:29,794 | INFO     | ready for new job
[2026-03-11 19:21:08] 2026-03-11 23:20:29,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 19:21:08] 2026-03-11 23:20:29,795 | INFO     | **************************************
[2026-03-11 19:21:08] 2026-03-11 23:20:29,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 19:21:08] 2026-03-11 23:20:29,795 | INFO     | **************************************
[2026-03-11 19:21:08] 2026-03-11 23:20:29,795 | INFO     | 
[2026-03-11 19:21:08] 2026-03-11 23:20:29,838 | INFO     | architecture information:
[2026-03-11 19:21:08] 2026-03-11 23:20:29,846 | INFO     | executing command: cat /etc/os-release
[2026-03-11 19:21:08] 2026-03-11 23:20:29,926 | INFO     | cat /etc/os-release:
[2026-03-11 19:21:08] NAME="CentOS Linux"
[2026-03-11 19:21:08] VERSION="7 (Core)"
[2026-03-11 19:21:08] ID="centos"
[2026-03-11 19:21:08] ID_LIKE="rhel fedora"
[2026-03-11 19:21:08] VERSION_ID="7"
[2026-03-11 19:21:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 19:21:08] ANSI_COLOR="0;31"
[2026-03-11 19:21:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 19:21:08] HOME_URL="https://www.centos.org/"
[2026-03-11 19:21:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 19:21:08] 
[2026-03-11 19:21:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 19:21:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 19:21:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 19:21:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 19:21:08] 
[2026-03-11 19:21:08] 2026-03-11 23:20:29,926 | INFO     | **************************************
[2026-03-11 19:21:08] 2026-03-11 23:20:30,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-11 19:21:08] 2026-03-11 23:20:30,494 | INFO     | sufficient remaining disk space (71341965312 B)
[2026-03-11 19:21:08] 2026-03-11 23:20:30,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 19:21:08] 2026-03-11 23:20:30,494 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 19:21:08] 2026-03-11 23:20:30,494 | INFO     | update_server=False
[2026-03-11 19:21:08] 2026-03-11 23:20:30,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 19:21:08] 2026-03-11 23:20:30,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 19:21:08] 2026-03-11 23:20:30,568 | INFO     | all data control threads have been joined
[2026-03-11 19:21:08] 2026-03-11 23:20:30,643 | INFO     | number of running child processes to parent process 1019307: 1
[2026-03-11 19:21:08] 2026-03-11 23:20:30,644 | INFO     | maximum number of monitored processes: 6
[2026-03-11 19:21:08] 2026-03-11 23:20:30,644 | INFO     | aborting job monitoring since job object (job id=7036369922) has expired
[2026-03-11 19:21:08] 2026-03-11 23:20:30,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 19:21:08] 2026-03-11 23:20:30,644 | INFO     | will abort loop
[2026-03-11 19:21:08] 2026-03-11 23:20:31,210 | INFO     | all payload control threads have been joined
[2026-03-11 19:21:08] 2026-03-11 23:20:31,515 | INFO     | [job] retrieve thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,574 | INFO     | [data] control thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,587 | INFO     | [data] copytool_in thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,649 | INFO     | [job] job monitor thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,650 | INFO     | [payload] failed_post thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,656 | INFO     | [payload] validate_post thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:31,791 | INFO     | all job control threads have been joined
[2026-03-11 19:21:08] 2026-03-11 23:20:31,864 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,088 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,216 | INFO     | [payload] control thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 19:21:08] 2026-03-11 23:20:32,367 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,368 | INFO     | [job] validate thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,520 | INFO     | [data] copytool_out thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:32,797 | INFO     | [job] control thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:33,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 19:21:08] 2026-03-11 23:20:33,259 | INFO     | [job] queue monitor thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:37,060 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:41,107 | INFO     | job.realtimelogging is not enabled
[2026-03-11 19:21:08] 2026-03-11 23:20:42,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 19:21:08] 2026-03-11 23:20:43,805 | INFO     | [monitor] cgroup control has ended
[2026-03-11 19:21:08] 2026-03-11 23:20:44,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508327032640)>', '<ExcThread(monitor, started 140507657246464)>']
[2026-03-11 19:21:08] 2026-03-11 23:20:49,760 | INFO     | all workflow threads have been joined
[2026-03-11 19:21:08] 2026-03-11 23:20:49,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 19:21:08] 2026-03-11 23:20:49,761 | INFO     | traces error code: 0
[2026-03-11 19:21:08] 2026-03-11 23:20:49,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 19:21:08] 2026-03-11 23:21:03,969 | INFO     | PID=1006714 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 19:21:08] 2026-03-11 23:21:03,969 | INFO     | .. there are 92 such processes running
[2026-03-11 19:21:08] 2026-03-11 23:21:03,970 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 19:21:08] 2026-03-11 23:21:03,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 19:21:08] 2026-03-11 23:21:03,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 19:21:08] 2026-03-11 23:21:03,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 19:21:08] 2026-03-11 23:21:03,970 | INFO     | [monitor] control thread has ended
[2026-03-11 19:21:08] 2026-03-11 23:21:04,840 [wrapper] ==== pilot stdout END ====
[2026-03-11 19:21:08] 2026-03-11 23:21:04,887 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 19:21:08] 2026-03-11 23:21:04,940 [wrapper] pilotpid: 1006714
[2026-03-11 19:21:08] 2026-03-11 23:21:04,958 [wrapper] Pilot exit status: 0
[2026-03-11 19:21:08] 2026-03-11 23:21:05,235 [wrapper] pandaids: 7036369922
[2026-03-11 19:21:08] 2026-03-11 23:21:06,661 [wrapper] cleanup supervisor_pilot 2683607 1006715
[2026-03-11 19:21:08] 2026-03-11 23:21:06,703 [wrapper] Test setup, not cleaning
[2026-03-11 19:21:08] 2026-03-11 23:21:06,752 [wrapper] apfmon messages muted
[2026-03-11 19:21:08] 2026-03-11 23:21:06,797 [wrapper] ==== wrapper stdout END ====
[2026-03-11 19:21:08] 2026-03-11 23:21:06,850 [wrapper] ==== wrapper stderr END ====
[2026-03-11 19:21:08]  *** Error codes and diagnostics ***
[2026-03-11 19:21:08]     "exeErrorCode": 0,
[2026-03-11 19:21:08]     "exeErrorDiag": "",
[2026-03-11 19:21:08]     "pilotErrorCode": 0,
[2026-03-11 19:21:08]     "pilotErrorDiag": "",
[2026-03-11 19:21:08]  *** Listing of results directory ***
[2026-03-11 19:21:08] total 509836
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 12:25 pilot3.tar.gz
[2026-03-11 19:21:08] -rwx------. 1 boincer umatlas     36322 Mar  3 12:25 runpilot2-wrapper.sh
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 12:25 queuedata.json
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas       100 Mar 11 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 19:21:08] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 16:43 run_atlas
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas       105 Mar 11 16:43 job.xml
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas 293613026 Mar 11 16:43 EVNT.48220197._000148.pool.root.1
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 16:43 start_atlas.sh
[2026-03-11 19:21:08] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 16:43 shared
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas    597968 Mar 11 16:43 input.tar.gz
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas         0 Mar 11 16:43 boinc_lockfile
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas      2567 Mar 11 16:43 pandaJob.out
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas        57 Mar 11 16:43 setup.sh.local
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas   1006235 Mar 11 16:44 agis_schedconf.cvmfs.json
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas   1511578 Mar 11 16:44 agis_ddmendpoints.agis.ALL.json
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas       431 Mar 11 16:45 workernode_map.json
[2026-03-11 19:21:08] drwx------. 5 boincer umatlas      4096 Mar 11 16:45 pilot3
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas 221441185 Mar 11 19:19 HITS.48838577._003793.pool.root.1
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas       530 Mar 11 19:19 boinc_task_state.xml
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas      7171 Mar 11 19:19 init_data.xml
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas      1036 Mar 11 19:20 memory_monitor_summary.json
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas    419219 Mar 11 19:20 log.48838577._003793.job.log.tgz.1
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas      6334 Mar 11 19:20 heartbeat.json
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 19:21 boinc_mmap_file
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas       823 Mar 11 19:21 pilotlog.txt
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas        95 Mar 11 19:21 pilot_heartbeat.json
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas        27 Mar 11 19:21 wrapper_checkpoint.txt
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas   1124610 Mar 11 19:21 log.48838577._003793.job.log.1
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas       357 Mar 11 19:21 output.list
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas       620 Mar 11 19:21 runtime_log
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas   1556480 Mar 11 19:21 result.tar.gz
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas       651 Mar 11 19:21 UNxLDmHgiH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmr3ELDmA10Jxm.diag
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas      9338 Mar 11 19:21 runtime_log.err
[2026-03-11 19:21:08] -rw-r--r--. 1 boincer umatlas     21402 Mar 11 19:21 stderr.txt
[2026-03-11 19:21:08] HITS file was successfully produced:
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas 221441185 Mar 11 19:19 shared/HITS.pool.root.1
[2026-03-11 19:21:08]  *** Contents of shared directory: ***
[2026-03-11 19:21:08] total 505112
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas 293613026 Mar 11 16:43 ATLAS.root_0
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 16:43 start_atlas.sh
[2026-03-11 19:21:08] -rw-r--r--. 2 boincer umatlas    597968 Mar 11 16:43 input.tar.gz
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas 221441185 Mar 11 19:19 HITS.pool.root.1
[2026-03-11 19:21:08] -rw-------. 1 boincer umatlas   1556480 Mar 11 19:21 result.tar.gz
19:21:09 (994035): run_atlas exited; CPU time 26471.529452
19:21:09 (994035): called boinc_finish(0)

</stderr_txt>
]]>

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