Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:07:03 (3424369): wrapper (7.7.26015): starting
06:07:03 (3424369): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 06:07:03] Arguments: --nthreads 4
[2026-03-13 06:07:03] Threads: 4
[2026-03-13 06:07:03] Checking for CVMFS
[2026-03-13 06:07:03] No cvmfs_config command found, will try listing directly
[2026-03-13 06:07:03] CVMFS is ok
[2026-03-13 06:07:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 06:07:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 06:07:03] Further information can be found at the LHC@home message board.
[2026-03-13 06:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 06:07:03] Checking for apptainer binary...
[2026-03-13 06:07:03] which: no apptainer in ((null))
[2026-03-13 06:07:03] apptainer is not installed, using version from CVMFS
[2026-03-13 06:07:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 06:07:03] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-13 06:07:03] apptainer works
[2026-03-13 06:07:03] Set ATHENA_PROC_NUMBER=4
[2026-03-13 06:07:03] Set ATHENA_CORE_NUMBER=4
[2026-03-13 06:07:03] Starting ATLAS job with PandaID=7049996440
[2026-03-13 06:07:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 09:48:44]  *** The last 200 lines of the pilot log: ***
[2026-03-13 09:48:44] 2026-03-13 08:43:05,736 | INFO     | intersect: -21531056914.208366
[2026-03-13 09:48:44] 2026-03-13 08:43:05,736 | INFO     | chi2: 1.286449193671371
[2026-03-13 09:48:44] 2026-03-13 08:43:05,736 | INFO     | current chi2=1.286449193671371 (change=-0.02500291803905107 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,736 | INFO     | right removable region: 206
[2026-03-13 09:48:44] 2026-03-13 08:43:05,736 | INFO     | sum of square deviations: 2750295288.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,738 | INFO     | sum of deviations: 7046849868.999997
[2026-03-13 09:48:44] 2026-03-13 08:43:05,738 | INFO     | mean x: 1773385050.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,738 | INFO     | mean y: 2336284.434782609
[2026-03-13 09:48:44] 2026-03-13 08:43:05,738 | INFO     | intersect: -4541458798.880304
[2026-03-13 09:48:44] 2026-03-13 08:43:05,738 | INFO     | chi2: 0.002294529794335821
[2026-03-13 09:48:44] 2026-03-13 08:43:05,739 | INFO     | current chi2=0.002294529794335821 (change=99.82159392652036 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,739 | INFO     | sum of square deviations: 2555770710.5
[2026-03-13 09:48:44] 2026-03-13 08:43:05,740 | INFO     | sum of deviations: 7147093456.499999
[2026-03-13 09:48:44] 2026-03-13 08:43:05,740 | INFO     | mean x: 1773385202.5
[2026-03-13 09:48:44] 2026-03-13 08:43:05,740 | INFO     | mean y: 2336210.301980198
[2026-03-13 09:48:44] 2026-03-13 08:43:05,740 | INFO     | intersect: -4956852704.638704
[2026-03-13 09:48:44] 2026-03-13 08:43:05,741 | INFO     | chi2: 0.0013162350996783377
[2026-03-13 09:48:44] 2026-03-13 08:43:05,741 | INFO     | current chi2=0.0013162350996783377 (change=42.6359551779393 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,741 | INFO     | sum of square deviations: 2370641658.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,742 | INFO     | sum of deviations: 5964648198.000001
[2026-03-13 09:48:44] 2026-03-13 08:43:05,742 | INFO     | mean x: 1773385355.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,743 | INFO     | mean y: 2337183.4010152286
[2026-03-13 09:48:44] 2026-03-13 08:43:05,743 | INFO     | intersect: -4459585489.038727
[2026-03-13 09:48:44] 2026-03-13 08:43:05,743 | INFO     | chi2: 0.000831589350028533
[2026-03-13 09:48:44] 2026-03-13 08:43:05,743 | INFO     | current chi2=0.000831589350028533 (change=36.8206067265827 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,743 | INFO     | sum of square deviations: 2194675568.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,744 | INFO     | sum of deviations: 5042154775.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,745 | INFO     | mean x: 1773385507.5
[2026-03-13 09:48:44] 2026-03-13 08:43:05,745 | INFO     | mean y: 2337982.875
[2026-03-13 09:48:44] 2026-03-13 08:43:05,745 | INFO     | intersect: -4071924443.395799
[2026-03-13 09:48:44] 2026-03-13 08:43:05,745 | INFO     | chi2: 0.0005698081689048138
[2026-03-13 09:48:44] 2026-03-13 08:43:05,745 | INFO     | current chi2=0.0005698081689048138 (change=31.479621656378487 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,746 | INFO     | sum of square deviations: 2027639878.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | sum of deviations: 4396484781.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | mean x: 1773385660.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | mean y: 2338570.914438503
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | intersect: -3842852653.438489
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | chi2: 0.00047439190323177795
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | current chi2=0.00047439190323177795 (change=16.74533130271341 %)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,747 | INFO     | left removable region: 50
[2026-03-13 09:48:44] 2026-03-13 08:43:05,748 | INFO     | sum of square deviations: 1177156955.0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | sum of deviations: 2861804721.4999995
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | mean x: 1773386239.5
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | mean y: 2339830.9423076925
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | intersect: -4308967248.1075115
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | chi2: 0.0004221737166553463
[2026-03-13 09:48:44] 2026-03-13 08:43:05,749 | INFO     | current memory leak: 2.43 B/s (using 156 data points, chi2=0.00)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | could have reported an average CPU frequency of 2606 MHz (11 samples)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | ..............................
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . Timing measurements:
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . get job = 0 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . initial setup = 5 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . payload setup = 5 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . stage-in = 0 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,750 | INFO     | . payload execution = 12921 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,751 | INFO     | . stage-out = 1 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,751 | INFO     | . log creation = 0 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,751 | INFO     | ..............................
[2026-03-13 09:48:44] 2026-03-13 08:43:05,842 | INFO     | 
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | job summary report
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | --------------------------------------------------
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | PanDA job id: 7049996440
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | task id: 48967030
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | errors: (none)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | pilot state: finished 
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | transexitcode: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | exeerrorcode: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | exeerrordiag: 
[2026-03-13 09:48:44] 2026-03-13 08:43:05,843 | INFO     | exitcode: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | exitmsg: OK
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | cpuconsumptiontime: 49981 s
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | nevents: 400
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | neventsw: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | pid: 3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | pgrp: 3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | corecount: 4
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | event service: False
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | sizes: {0: 2280047, 1: 2280253, 11: 2280281, 12931: 2310422, 12933: 2319442, 12934: 2319498, 12935: 2319820}
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | --------------------------------------------------
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | 
[2026-03-13 09:48:44] 2026-03-13 08:43:05,844 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot40/slots/0
[2026-03-13 09:48:44] 2026-03-13 08:43:05,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | job 7049996440 has completed (purged errors)
[2026-03-13 09:48:44] 2026-03-13 08:43:05,882 | INFO     | overall cleanup function is called
[2026-03-13 09:48:44] 2026-03-13 08:43:06,347 | INFO     | PID=3429518 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 09:48:44] 2026-03-13 08:43:06,348 | INFO     | .. there are 11 such processes running
[2026-03-13 09:48:44] 2026-03-13 08:43:06,889 | INFO     | --- collectZombieJob: --- 10, [3439374]
[2026-03-13 09:48:44] 2026-03-13 08:43:06,890 | INFO     | zombie collector waiting for pid 3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:06,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 09:48:44] 2026-03-13 08:43:06,890 | INFO     | collected zombie processes
[2026-03-13 09:48:44] 2026-03-13 08:43:06,890 | INFO     | will attempt to kill all subprocesses of pid=3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:07,369 | WARNING  | process 3439374 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 09:48:44] 2026-03-13 08:43:07,948 | INFO     | process IDs to be killed: [3439374] (in reverse order)
[2026-03-13 09:48:44] 2026-03-13 08:43:08,040 | INFO     | using path: /var/lib/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 09:48:44] 2026-03-13 08:43:08,081 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 09:48:44] 2026-03-13 08:43:08,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 09:48:44] 2026-03-13 08:43:08,110 | INFO     | did not find any defunct processes belonging to 3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:08,139 | INFO     | did not find any defunct processes belonging to 3439374
[2026-03-13 09:48:44] 2026-03-13 08:43:08,139 | INFO     | ready for new job
[2026-03-13 09:48:44] 2026-03-13 08:43:08,140 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 09:48:44] 2026-03-13 08:43:08,142 | INFO     | **************************************
[2026-03-13 09:48:44] 2026-03-13 08:43:08,142 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 09:48:44] 2026-03-13 08:43:08,142 | INFO     | **************************************
[2026-03-13 09:48:44] 2026-03-13 08:43:08,142 | INFO     | 
[2026-03-13 09:48:44] 2026-03-13 08:43:08,147 | INFO     | architecture information:
[2026-03-13 09:48:44] 2026-03-13 08:43:08,147 | INFO     | executing command: cat /etc/os-release
[2026-03-13 09:48:44] 2026-03-13 08:43:08,163 | INFO     | cat /etc/os-release:
[2026-03-13 09:48:44] NAME="CentOS Linux"
[2026-03-13 09:48:44] VERSION="7 (Core)"
[2026-03-13 09:48:44] ID="centos"
[2026-03-13 09:48:44] ID_LIKE="rhel fedora"
[2026-03-13 09:48:44] VERSION_ID="7"
[2026-03-13 09:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 09:48:44] ANSI_COLOR="0;31"
[2026-03-13 09:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 09:48:44] HOME_URL="https://www.centos.org/"
[2026-03-13 09:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 09:48:44] 
[2026-03-13 09:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 09:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 09:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 09:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 09:48:44] 
[2026-03-13 09:48:44] 2026-03-13 08:43:08,164 | INFO     | **************************************
[2026-03-13 09:48:44] 2026-03-13 08:43:08,494 | INFO     | number of running child processes to parent process 3439374: 1
[2026-03-13 09:48:44] 2026-03-13 08:43:08,494 | INFO     | maximum number of monitored processes: 6
[2026-03-13 09:48:44] 2026-03-13 08:43:08,494 | INFO     | aborting job monitoring since job object (job id=7049996440) has expired
[2026-03-13 09:48:44] 2026-03-13 08:43:08,667 | INFO     | executing command: df -mP /var/lib/boinc/var/slot40/slots/0
[2026-03-13 09:48:44] 2026-03-13 08:43:08,683 | INFO     | sufficient remaining disk space (21088960512 B)
[2026-03-13 09:48:44] 2026-03-13 08:43:08,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 09:48:44] 2026-03-13 08:43:08,683 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 09:48:44] 2026-03-13 08:43:08,684 | INFO     | update_server=False
[2026-03-13 09:48:44] 2026-03-13 08:43:08,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 09:48:44] 2026-03-13 08:43:08,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:48:44] 2026-03-13 08:43:08,684 | INFO     | will abort loop
[2026-03-13 09:48:44] 2026-03-13 08:43:09,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 09:48:44] 2026-03-13 08:43:09,558 | INFO     | all payload control threads have been joined
[2026-03-13 09:48:44] 2026-03-13 08:43:09,609 | INFO     | all data control threads have been joined
[2026-03-13 09:48:44] 2026-03-13 08:43:09,689 | INFO     | [job] job monitor thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:09,689 | INFO     | [job] retrieve thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:09,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,371 | INFO     | all job control threads have been joined
[2026-03-13 09:48:44] 2026-03-13 08:43:10,505 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,563 | INFO     | [payload] control thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,588 | INFO     | [job] validate thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,606 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,615 | INFO     | [data] control thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,617 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,818 | INFO     | [data] copytool_in thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:10,852 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:48:44] 2026-03-13 08:43:11,131 | INFO     | [payload] validate_post thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:11,230 | INFO     | [payload] failed_post thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:11,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 09:48:44] 2026-03-13 08:43:11,376 | INFO     | [job] control thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:11,451 | INFO     | [data] copytool_out thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:11,857 | INFO     | [job] queue monitor thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:15,297 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 09:48:44] 2026-03-13 08:43:38,906 | INFO     | PID=3429518 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 09:48:44] 2026-03-13 08:43:38,907 | INFO     | .. there are 11 such processes running
[2026-03-13 09:48:44] 2026-03-13 08:43:38,907 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 09:48:44] 2026-03-13 08:43:38,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 09:48:44] 2026-03-13 08:43:38,908 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 09:48:44] 2026-03-13 08:43:40,679 | INFO     | [monitor] cgroup control has ended
[2026-03-13 09:48:44] 2026-03-13 08:43:42,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22478137616192)>', '<ExcThread(monitor, started 22477899314944)>']
[2026-03-13 09:48:44] 2026-03-13 08:43:42,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 09:48:44] 2026-03-13 08:43:42,924 | INFO     | [monitor] control thread has ended
[2026-03-13 09:48:44] 2026-03-13 08:43:47,494 | INFO     | all workflow threads have been joined
[2026-03-13 09:48:44] 2026-03-13 08:43:47,495 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 09:48:44] 2026-03-13 08:43:47,495 | INFO     | traces error code: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:47,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 09:48:44] 2026-03-13 08:43:47,638 [wrapper] ==== pilot stdout END ====
[2026-03-13 09:48:44] 2026-03-13 08:43:47,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 09:48:44] 2026-03-13 08:43:47,645 [wrapper] pilotpid: 3429518
[2026-03-13 09:48:44] 2026-03-13 08:43:47,648 [wrapper] Pilot exit status: 0
[2026-03-13 09:48:44] 2026-03-13 08:43:47,659 [wrapper] pandaids: 7049996440
[2026-03-13 09:48:44] 2026-03-13 08:43:47,741 [wrapper] cleanup supervisor_pilot 3656340 3429519
[2026-03-13 09:48:44] 2026-03-13 08:43:47,744 [wrapper] Test setup, not cleaning
[2026-03-13 09:48:44] 2026-03-13 08:43:47,747 [wrapper] apfmon messages muted
[2026-03-13 09:48:44] 2026-03-13 08:43:47,749 [wrapper] ==== wrapper stdout END ====
[2026-03-13 09:48:44] 2026-03-13 08:43:47,752 [wrapper] ==== wrapper stderr END ====
[2026-03-13 09:48:44]  *** Error codes and diagnostics ***
[2026-03-13 09:48:44]     "exeErrorCode": 0,
[2026-03-13 09:48:44]     "exeErrorDiag": "",
[2026-03-13 09:48:44]     "pilotErrorCode": 0,
[2026-03-13 09:48:44]     "pilotErrorDiag": "",
[2026-03-13 09:48:44]  *** Listing of results directory ***
[2026-03-13 09:48:44] total 411888
[2026-03-13 09:48:44] -rwx------. 1 boinc boinc     36322 Mar 11 18:00 runpilot2-wrapper.sh
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc      5111 Mar 11 18:00 queuedata.json
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc    585013 Mar 11 18:00 pilot3.tar.gz
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc       100 Mar 13 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 09:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 06:06 run_atlas
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc       105 Mar 13 06:06 job.xml
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc      6563 Mar 13 06:07 init_data.xml
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc 214464705 Mar 13 06:07 EVNT.48967027._000167.pool.root.1
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 06:07 start_atlas.sh
[2026-03-13 09:48:44] drwxrwx--x. 2 boinc boinc      4096 Mar 13 06:07 shared
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc    597507 Mar 13 06:07 input.tar.gz
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc         0 Mar 13 06:07 boinc_lockfile
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc      2565 Mar 13 06:07 pandaJob.out
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc   1006514 Mar 13 06:07 agis_schedconf.cvmfs.json
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc       452 Mar 13 06:07 workernode_map.json
[2026-03-13 09:48:44] drwx------. 5 boinc boinc      4096 Mar 13 06:07 pilot3
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc 198899799 Mar 13 09:42 HITS.48967030._004199.pool.root.1
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc       529 Mar 13 09:42 boinc_task_state.xml
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc      1035 Mar 13 09:42 memory_monitor_summary.json
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc        95 Mar 13 09:43 pilot_heartbeat.json
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc   1511578 Mar 13 09:43 agis_ddmendpoints.agis.ALL.json
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc    400427 Mar 13 09:43 log.48967030._004199.job.log.tgz.1
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc      6405 Mar 13 09:43 heartbeat.json
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc      5119 Mar 13 09:43 pilotlog.txt
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc   1838304 Mar 13 09:43 log.48967030._004199.job.log.1
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc       357 Mar 13 09:43 output.list
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc       620 Mar 13 09:43 runtime_log
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc   2252800 Mar 13 09:43 result.tar.gz
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc      9205 Mar 13 09:43 runtime_log.err
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc       665 Mar 13 09:43 h99LDm15bK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvYhLDmBCFvwn.diag
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc        27 Mar 13 09:48 wrapper_checkpoint.txt
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc      8192 Mar 13 09:48 boinc_mmap_file
[2026-03-13 09:48:44] -rw-r--r--. 1 boinc boinc     21030 Mar 13 09:48 stderr.txt
[2026-03-13 09:48:44] HITS file was successfully produced:
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc 198899799 Mar 13 09:42 shared/HITS.pool.root.1
[2026-03-13 09:48:44]  *** Contents of shared directory: ***
[2026-03-13 09:48:44] total 406488
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc 214464705 Mar 13 06:07 ATLAS.root_0
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc     15845 Mar 13 06:07 start_atlas.sh
[2026-03-13 09:48:44] -rw-r--r--. 2 boinc boinc    597507 Mar 13 06:07 input.tar.gz
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc 198899799 Mar 13 09:42 HITS.pool.root.1
[2026-03-13 09:48:44] -rw-------. 1 boinc boinc   2252800 Mar 13 09:43 result.tar.gz
09:48:46 (3424369): run_atlas exited; CPU time 50526.361618
09:48:46 (3424369): called boinc_finish(0)

</stderr_txt>
]]>

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