Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:45:33 (2568902): wrapper (7.7.26015): starting
17:45:33 (2568902): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 17:45:33] Arguments: --nthreads 8
[2026-03-11 17:45:33] Threads: 8
[2026-03-11 17:45:33] Checking for CVMFS
[2026-03-11 17:45:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 17:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 17:45:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 17:45:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 17:45:35] 2.13.3.0 424664 50505 402528 157171 0 448 18765085 32935936 51629 16776704 1 204349207 99.497 251940650 14898 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 17:45:35] CVMFS is ok
[2026-03-11 17:45:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 17:45:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 17:45:35] Further information can be found at the LHC@home message board.
[2026-03-11 17:45:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 17:45:35] Checking for apptainer binary...
[2026-03-11 17:45:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 17:45:35] Running /usr/bin/apptainer --version
[2026-03-11 17:45:35] apptainer version 1.4.5-2.el9
[2026-03-11 17:45:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 17:45:36] c6-12-29-3.aglt2.org
[2026-03-11 17:45:36] apptainer works
[2026-03-11 17:45:36] Set ATHENA_PROC_NUMBER=8
[2026-03-11 17:45:36] Set ATHENA_CORE_NUMBER=8
[2026-03-11 17:45:36] Starting ATLAS job with PandaID=7036368422
[2026-03-11 17:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:00:06 (2568902): BOINC client no longer exists - exiting
21:00:06 (2568902): timer handler: client dead, exiting
21:01:02 (3690977): wrapper (7.7.26015): starting
21:01:02 (3690977): wrapper: running run_atlas (--nthreads 9)
[2026-03-11 21:01:02] Arguments: --nthreads 9
[2026-03-11 21:01:02] Threads: 9
[2026-03-11 21:01:02] This job has been restarted, cleaning up previous attempt
[2026-03-11 21:01:02] Checking for CVMFS
[2026-03-11 21:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 21:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 21:01:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 21:01:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 21:01:04] 2.13.3.0 424664 50701 418236 157177 1 628 23663201 32935937 46226 16776704 1 205793992 99.499 252957378 14926 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 21:01:04] CVMFS is ok
[2026-03-11 21:01:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 21:01:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 21:01:04] Further information can be found at the LHC@home message board.
[2026-03-11 21:01:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 21:01:04] Checking for apptainer binary...
[2026-03-11 21:01:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 21:01:04] Running /usr/bin/apptainer --version
[2026-03-11 21:01:04] apptainer version 1.4.5-2.el9
[2026-03-11 21:01:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 21:01:05] c6-12-29-3.aglt2.org
[2026-03-11 21:01:05] apptainer works
[2026-03-11 21:01:05] Set ATHENA_PROC_NUMBER=9
[2026-03-11 21:01:05] Set ATHENA_CORE_NUMBER=9
[2026-03-11 21:01:05] Starting ATLAS job with PandaID=7036368422
[2026-03-11 21:01:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 00:19:53]  *** The last 200 lines of the pilot log: ***
[2026-03-12 00:19:53] 2026-03-12 04:18:49,081 | INFO     | log transfer has been attempted: DONE
[2026-03-12 00:19:53] 2026-03-12 04:18:49,081 | INFO     | job 7036368422 has finished - writing final server update
[2026-03-12 00:19:53] 2026-03-12 04:18:49,081 | INFO     | total number of processed events: 400 (read)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,135 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7036368422/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,135 | INFO     | extracted standard info from prmon json
[2026-03-12 00:19:53] 2026-03-12 04:18:49,135 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 00:19:53] 2026-03-12 04:18:49,135 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 00:19:53] 2026-03-12 04:18:49,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 00:19:53] 2026-03-12 04:18:49,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 00:19:53] 2026-03-12 04:18:49,144 | INFO     | fitting pss+swap vs Time
[2026-03-12 00:19:53] 2026-03-12 04:18:49,172 | INFO     | sum of square deviations: 2264246714.0412326
[2026-03-12 00:19:53] 2026-03-12 04:18:49,173 | INFO     | sum of deviations: 29329222593.536106
[2026-03-12 00:19:53] 2026-03-12 04:18:49,174 | INFO     | mean x: 1773283211.1752577
[2026-03-12 00:19:53] 2026-03-12 04:18:49,174 | INFO     | mean y: 2490659.2783505153
[2026-03-12 00:19:53] 2026-03-12 04:18:49,174 | INFO     | intersect: -22967187379.522385
[2026-03-12 00:19:53] 2026-03-12 04:18:49,174 | INFO     | chi2: 2.3688669627919117
[2026-03-12 00:19:53] 2026-03-12 04:18:49,175 | INFO     | sum of square deviations: 2093682934.95238
[2026-03-12 00:19:53] 2026-03-12 04:18:49,206 | INFO     | sum of deviations: 40828308230.15874
[2026-03-12 00:19:53] 2026-03-12 04:18:49,206 | INFO     | mean x: 1773283058.6825397
[2026-03-12 00:19:53] 2026-03-12 04:18:49,206 | INFO     | mean y: 2500705.502645503
[2026-03-12 00:19:53] 2026-03-12 04:18:49,206 | INFO     | intersect: -34577781767.333244
[2026-03-12 00:19:53] 2026-03-12 04:18:49,207 | INFO     | chi2: 1.6462242130603917
[2026-03-12 00:19:53] 2026-03-12 04:18:49,207 | INFO     | current chi2=1.6462242130603917 (change=30.505839335098155 %)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,207 | INFO     | sum of square deviations: 1931910262.3423827
[2026-03-12 00:19:53] 2026-03-12 04:18:49,208 | INFO     | sum of deviations: 39568946880.565216
[2026-03-12 00:19:53] 2026-03-12 04:18:49,208 | INFO     | mean x: 1773282906.1902175
[2026-03-12 00:19:53] 2026-03-12 04:18:49,208 | INFO     | mean y: 2499517.8695652173
[2026-03-12 00:19:53] 2026-03-12 04:18:49,209 | INFO     | intersect: -36317477909.125275
[2026-03-12 00:19:53] 2026-03-12 04:18:49,209 | INFO     | chi2: 1.6468393211361876
[2026-03-12 00:19:53] 2026-03-12 04:18:49,209 | INFO     | current chi2=1.6468393211361876 (change=-0.03736478123185855 %)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,209 | INFO     | right removable region: 183
[2026-03-12 00:19:53] 2026-03-12 04:18:49,209 | INFO     | sum of square deviations: 2093626814.201059
[2026-03-12 00:19:53] 2026-03-12 04:18:49,245 | INFO     | sum of deviations: -4724394533.677253
[2026-03-12 00:19:53] 2026-03-12 04:18:49,245 | INFO     | mean x: 1773283363.6931217
[2026-03-12 00:19:53] 2026-03-12 04:18:49,245 | INFO     | mean y: 2520808.402116402
[2026-03-12 00:19:53] 2026-03-12 04:18:49,245 | INFO     | intersect: 4004041123.898063
[2026-03-12 00:19:53] 2026-03-12 04:18:49,245 | INFO     | chi2: 0.761653392996493
[2026-03-12 00:19:53] 2026-03-12 04:18:49,246 | INFO     | current chi2=0.761653392996493 (change=67.84735466533674 %)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,246 | INFO     | sum of square deviations: 1931809184.1521647
[2026-03-12 00:19:53] 2026-03-12 04:18:49,247 | INFO     | sum of deviations: -6747686238.402175
[2026-03-12 00:19:53] 2026-03-12 04:18:49,247 | INFO     | mean x: 1773283516.2065217
[2026-03-12 00:19:53] 2026-03-12 04:18:49,247 | INFO     | mean y: 2522674.6684782607
[2026-03-12 00:19:53] 2026-03-12 04:18:49,247 | INFO     | intersect: 6196488868.251739
[2026-03-12 00:19:53] 2026-03-12 04:18:49,248 | INFO     | chi2: 0.7452062352303499
[2026-03-12 00:19:53] 2026-03-12 04:18:49,278 | INFO     | current chi2=0.7452062352303499 (change=2.1594018903318757 %)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,278 | INFO     | left removable region: 20
[2026-03-12 00:19:53] 2026-03-12 04:18:49,278 | INFO     | sum of square deviations: 1343030098.6871185
[2026-03-12 00:19:53] 2026-03-12 04:18:49,283 | INFO     | sum of deviations: 4934783960.466259
[2026-03-12 00:19:53] 2026-03-12 04:18:49,283 | INFO     | mean x: 1773283485.7484663
[2026-03-12 00:19:53] 2026-03-12 04:18:49,284 | INFO     | mean y: 2533608.8650306747
[2026-03-12 00:19:53] 2026-03-12 04:18:49,284 | INFO     | intersect: -6513158713.582219
[2026-03-12 00:19:53] 2026-03-12 04:18:49,284 | INFO     | chi2: 0.0002558538229047336
[2026-03-12 00:19:53] 2026-03-12 04:18:49,284 | INFO     | current memory leak: 3.67 B/s (using 163 data points, chi2=0.00)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | could have reported an average CPU frequency of 2758 MHz (10 samples)
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | ..............................
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . Timing measurements:
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . get job = 0 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . initial setup = 2 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . payload setup = 12 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . stage-in = 0 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,285 | INFO     | . payload execution = 11804 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,286 | INFO     | . stage-out = 4 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,286 | INFO     | . log creation = 0 s
[2026-03-12 00:19:53] 2026-03-12 04:18:49,286 | INFO     | ..............................
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | 
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | job summary report
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | --------------------------------------------------
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | PanDA job id: 7036368422
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | task id: 48700890
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | errors: (none)
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 00:19:53] 2026-03-12 04:18:50,055 | INFO     | pilot state: finished 
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | transexitcode: 0
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | exeerrorcode: 0
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | exeerrordiag: 
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | exitcode: 0
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | exitmsg: OK
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | cpuconsumptiontime: 32505 s
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | nevents: 400
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | neventsw: 0
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | pid: 3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | pgrp: 3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | corecount: 9
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | event service: False
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | sizes: {0: 2279682, 1: 2280143, 12: 2280143, 11823: 2309452, 11828: 2318506, 11832: 2318644}
[2026-03-12 00:19:53] 2026-03-12 04:18:50,056 | INFO     | --------------------------------------------------
[2026-03-12 00:19:53] 2026-03-12 04:18:50,057 | INFO     | 
[2026-03-12 00:19:53] 2026-03-12 04:18:50,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-12 00:19:53] 2026-03-12 04:18:50,078 | INFO     | time since job start (11845s) is within the limit (349056.0s)
[2026-03-12 00:19:53] 2026-03-12 04:18:50,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,489 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,489 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | job 7036368422 has completed (purged errors)
[2026-03-12 00:19:53] 2026-03-12 04:18:50,491 | INFO     | overall cleanup function is called
[2026-03-12 00:19:53] 2026-03-12 04:18:51,503 | INFO     | --- collectZombieJob: --- 10, [3744025]
[2026-03-12 00:19:53] 2026-03-12 04:18:51,503 | INFO     | zombie collector waiting for pid 3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:51,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 00:19:53] 2026-03-12 04:18:51,503 | INFO     | collected zombie processes
[2026-03-12 00:19:53] 2026-03-12 04:18:51,503 | INFO     | will attempt to kill all subprocesses of pid=3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:54,834 | INFO     | process IDs to be killed: [3744025] (in reverse order)
[2026-03-12 00:19:53] 2026-03-12 04:18:56,924 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 00:19:53] 2026-03-12 04:18:56,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 00:19:53] 2026-03-12 04:18:57,146 | INFO     | did not find any defunct processes belonging to 3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:57,285 | INFO     | did not find any defunct processes belonging to 3744025
[2026-03-12 00:19:53] 2026-03-12 04:18:57,286 | INFO     | ready for new job
[2026-03-12 00:19:53] 2026-03-12 04:18:57,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 00:19:53] 2026-03-12 04:18:57,288 | INFO     | **************************************
[2026-03-12 00:19:53] 2026-03-12 04:18:57,288 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 00:19:53] 2026-03-12 04:18:57,288 | INFO     | **************************************
[2026-03-12 00:19:53] 2026-03-12 04:18:57,288 | INFO     | 
[2026-03-12 00:19:53] 2026-03-12 04:18:57,315 | INFO     | architecture information:
[2026-03-12 00:19:53] 2026-03-12 04:18:57,345 | INFO     | executing command: cat /etc/os-release
[2026-03-12 00:19:53] 2026-03-12 04:18:57,414 | INFO     | cat /etc/os-release:
[2026-03-12 00:19:53] NAME="CentOS Linux"
[2026-03-12 00:19:53] VERSION="7 (Core)"
[2026-03-12 00:19:53] ID="centos"
[2026-03-12 00:19:53] ID_LIKE="rhel fedora"
[2026-03-12 00:19:53] VERSION_ID="7"
[2026-03-12 00:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 00:19:53] ANSI_COLOR="0;31"
[2026-03-12 00:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 00:19:53] HOME_URL="https://www.centos.org/"
[2026-03-12 00:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 00:19:53] 
[2026-03-12 00:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 00:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 00:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 00:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 00:19:53] 
[2026-03-12 00:19:53] 2026-03-12 04:18:57,414 | INFO     | **************************************
[2026-03-12 00:19:53] 2026-03-12 04:18:57,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-12 00:19:53] 2026-03-12 04:18:57,991 | INFO     | sufficient remaining disk space (91503984640 B)
[2026-03-12 00:19:53] 2026-03-12 04:18:57,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 00:19:53] 2026-03-12 04:18:57,992 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 00:19:53] 2026-03-12 04:18:57,992 | INFO     | update_server=False
[2026-03-12 00:19:53] 2026-03-12 04:18:57,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 00:19:53] 2026-03-12 04:18:57,998 | INFO     | all payload control threads have been joined
[2026-03-12 00:19:53] 2026-03-12 04:18:57,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:19:53] 2026-03-12 04:18:57,998 | INFO     | aborting loop
[2026-03-12 00:19:53] 2026-03-12 04:18:58,392 | INFO     | all job control threads have been joined
[2026-03-12 00:19:53] 2026-03-12 04:18:58,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 00:19:53] 2026-03-12 04:18:58,895 | INFO     | all data control threads have been joined
[2026-03-12 00:19:53] 2026-03-12 04:18:58,998 | INFO     | [job] retrieve thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,004 | INFO     | [payload] control thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,004 | INFO     | [job] job monitor thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,091 | INFO     | [payload] failed_post thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:19:53] 2026-03-12 04:18:59,398 | INFO     | [job] control thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,502 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,507 | INFO     | [job] validate thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,517 | INFO     | [data] copytool_in thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,597 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,903 | INFO     | [data] control thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:18:59,939 | INFO     | [payload] validate_post thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:19:00,157 | INFO     | [job] queue monitor thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:19:00,366 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:19:00,846 | INFO     | [data] copytool_out thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:19:01,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 00:19:53] 2026-03-12 04:19:05,329 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 00:19:53] 2026-03-12 04:19:26,263 | INFO     | PID=3720514 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 00:19:53] 2026-03-12 04:19:26,263 | INFO     | .. there are 79 such processes running
[2026-03-12 00:19:53] 2026-03-12 04:19:26,264 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 00:19:53] 2026-03-12 04:19:26,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 00:19:53] 2026-03-12 04:19:26,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 00:19:53] 2026-03-12 04:19:46,875 | INFO     | [monitor] cgroup control has ended
[2026-03-12 00:19:53] 2026-03-12 04:19:47,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653162592064)>', '<ExcThread(monitor, started 139652379952896)>']
[2026-03-12 00:19:53] 2026-03-12 04:19:47,407 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 00:19:53] 2026-03-12 04:19:47,407 | INFO     | [monitor] control thread has ended
[2026-03-12 00:19:53] 2026-03-12 04:19:52,125 | INFO     | all workflow threads have been joined
[2026-03-12 00:19:53] 2026-03-12 04:19:52,125 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 00:19:53] 2026-03-12 04:19:52,125 | INFO     | traces error code: 0
[2026-03-12 00:19:53] 2026-03-12 04:19:52,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 00:19:53] 2026-03-12 04:19:52,558 [wrapper] ==== pilot stdout END ====
[2026-03-12 00:19:53] 2026-03-12 04:19:52,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 00:19:53] 2026-03-12 04:19:52,588 [wrapper] pilotpid: 3720514
[2026-03-12 00:19:53] 2026-03-12 04:19:52,672 [wrapper] Pilot exit status: 0
[2026-03-12 00:19:53] 2026-03-12 04:19:52,808 [wrapper] pandaids: 7036368422 7036368422
[2026-03-12 00:19:53] 2026-03-12 04:19:52,975 [wrapper] cleanup supervisor_pilot  588910 3720515
[2026-03-12 00:19:53] 2026-03-12 04:19:52,983 [wrapper] Test setup, not cleaning
[2026-03-12 00:19:53] 2026-03-12 04:19:52,991 [wrapper] apfmon messages muted
[2026-03-12 00:19:53] 2026-03-12 04:19:52,995 [wrapper] ==== wrapper stdout END ====
[2026-03-12 00:19:53] 2026-03-12 04:19:52,999 [wrapper] ==== wrapper stderr END ====
[2026-03-12 00:19:53]  *** Error codes and diagnostics ***
[2026-03-12 00:19:53]     "exeErrorCode": 0,
[2026-03-12 00:19:53]     "exeErrorDiag": "",
[2026-03-12 00:19:53]     "pilotErrorCode": 0,
[2026-03-12 00:19:53]     "pilotErrorDiag": "",
[2026-03-12 00:19:53]  *** Listing of results directory ***
[2026-03-12 00:19:53] total 528736
[2026-03-12 00:19:53] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 11:29 pilot3.tar.gz
[2026-03-12 00:19:53] -rwx------. 1 boincer umatlas     36322 Mar  3 11:30 runpilot2-wrapper.sh
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 11:31 queuedata.json
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas       100 Mar 11 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 00:19:53] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 17:45 run_atlas
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas       105 Mar 11 17:45 job.xml
[2026-03-12 00:19:53] -rw-r--r--. 3 boincer umatlas 190753283 Mar 11 17:45 EVNT.48700888._000097.pool.root.1
[2026-03-12 00:19:53] -rw-r--r--. 3 boincer umatlas 190753283 Mar 11 17:45 ATLAS.root_0
[2026-03-12 00:19:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 17:45 start_atlas.sh
[2026-03-12 00:19:53] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 17:45 shared
[2026-03-12 00:19:53] -rw-r--r--. 2 boincer umatlas    597930 Mar 11 17:45 input.tar.gz
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas         0 Mar 11 17:45 boinc_lockfile
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas      2511 Mar 11 21:01 pandaJob.out
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas        57 Mar 11 21:01 setup.sh.local
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas   1006227 Mar 11 21:01 agis_schedconf.cvmfs.json
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas       444 Mar 11 21:01 workernode_map.json
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas 152366386 Mar 12 00:17 HITS.48700890._002115.pool.root.1
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas       530 Mar 12 00:17 boinc_task_state.xml
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas      1044 Mar 12 00:18 memory_monitor_summary.json
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas   1511578 Mar 12 00:18 agis_ddmendpoints.agis.ALL.json
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas    422740 Mar 12 00:18 log.48700890._002115.job.log.tgz.1
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas      6393 Mar 12 00:18 heartbeat.json
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas      6879 Mar 12 00:19 init_data.xml
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas        96 Mar 12 00:19 pilot_heartbeat.json
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas      8192 Mar 12 00:19 boinc_mmap_file
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas        28 Mar 12 00:19 wrapper_checkpoint.txt
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas      4820 Mar 12 00:19 pilotlog.txt
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas   1384464 Mar 12 00:19 log.48700890._002115.job.log.1
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas       357 Mar 12 00:19 output.list
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas       620 Mar 12 00:19 runtime_log
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas   1822720 Mar 12 00:19 result.tar.gz
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas       783 Mar 12 00:19 wrvKDmyohH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmY3GLDmpfibWm.diag
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas      9437 Mar 12 00:19 runtime_log.err
[2026-03-12 00:19:53] -rw-r--r--. 1 boincer umatlas     23097 Mar 12 00:19 stderr.txt
[2026-03-12 00:19:53] HITS file was successfully produced:
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas 152366386 Mar 12 00:17 shared/HITS.pool.root.1
[2026-03-12 00:19:53]  *** Contents of shared directory: ***
[2026-03-12 00:19:53] total 337464
[2026-03-12 00:19:53] -rw-r--r--. 3 boincer umatlas 190753283 Mar 11 17:45 ATLAS.root_0
[2026-03-12 00:19:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 17:45 start_atlas.sh
[2026-03-12 00:19:53] -rw-r--r--. 2 boincer umatlas    597930 Mar 11 17:45 input.tar.gz
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas 152366386 Mar 12 00:17 HITS.pool.root.1
[2026-03-12 00:19:53] -rw-------. 1 boincer umatlas   1822720 Mar 12 00:19 result.tar.gz
00:19:55 (3690977): run_atlas exited; CPU time 33242.105713
00:19:55 (3690977): called boinc_finish(0)

</stderr_txt>
]]>

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