Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:13:33 (710570): wrapper (7.7.26015): starting
17:13:33 (710570): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 17:13:33] Arguments: --nthreads 12
[2026-03-15 17:13:33] Threads: 12
[2026-03-15 17:13:33] Checking for CVMFS
[2026-03-15 17:13:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 17:13:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 17:13:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 17:13:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 17:13:34] 2.13.3.0 3534869 2063 68788 157322 3 188 2481563 4096001 17275 130560 0 12647347 99.999 73529 5825 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-15 17:13:34] CVMFS is ok
[2026-03-15 17:13:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 17:13:34] Checking for apptainer binary...
[2026-03-15 17:13:34] apptainer is not installed, using version from CVMFS
[2026-03-15 17:13:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 17:13:35] epyc7v12
[2026-03-15 17:13:35] apptainer works
[2026-03-15 17:13:35] Set ATHENA_PROC_NUMBER=12
[2026-03-15 17:13:35] Set ATHENA_CORE_NUMBER=12
[2026-03-15 17:13:36] Starting ATLAS job with PandaID=7036368788
[2026-03-15 17:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31430/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 18:59:35]  *** The last 200 lines of the pilot log: ***
[2026-03-15 18:59:35] 2026-03-15 18:58:46,754 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 18:59:35] 2026-03-15 18:58:46,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 18:59:35] 2026-03-15 18:58:46,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 18:59:35] 2026-03-15 18:58:46,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 18:59:35] 2026-03-15 18:58:46,761 | INFO     | fitting pss+swap vs Time
[2026-03-15 18:59:35] 2026-03-15 18:58:46,761 | INFO     | sum of square deviations: 338804492.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,762 | INFO     | sum of deviations: 20177206375.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,762 | INFO     | mean x: 1773598000.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,762 | INFO     | mean y: 2530066.5631067962
[2026-03-15 18:59:35] 2026-03-15 18:58:46,765 | INFO     | intersect: -105622553771.72098
[2026-03-15 18:59:35] 2026-03-15 18:58:46,765 | INFO     | chi2: 2.937415672032883
[2026-03-15 18:59:35] 2026-03-15 18:58:46,766 | INFO     | sum of square deviations: 291817564.5
[2026-03-15 18:59:35] 2026-03-15 18:58:46,766 | INFO     | sum of deviations: 26332863964.499996
[2026-03-15 18:59:35] 2026-03-15 18:58:46,766 | INFO     | mean x: 1773597847.5
[2026-03-15 18:59:35] 2026-03-15 18:58:46,766 | INFO     | mean y: 2549101.4591836734
[2026-03-15 18:59:35] 2026-03-15 18:58:46,767 | INFO     | intersect: -160042343761.55252
[2026-03-15 18:59:35] 2026-03-15 18:58:46,767 | INFO     | chi2: 2.105361720299997
[2026-03-15 18:59:35] 2026-03-15 18:58:46,767 | INFO     | current chi2=2.105361720299997 (change=28.32605407722396 %)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,767 | INFO     | sum of square deviations: 249388862.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,768 | INFO     | sum of deviations: 24950130025.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,768 | INFO     | mean x: 1773597695.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,771 | INFO     | mean y: 2544127.075268817
[2026-03-15 18:59:35] 2026-03-15 18:58:46,771 | INFO     | intersect: -177437188936.42578
[2026-03-15 18:59:35] 2026-03-15 18:58:46,771 | INFO     | chi2: 2.101481146431465
[2026-03-15 18:59:35] 2026-03-15 18:58:46,771 | INFO     | current chi2=2.101481146431465 (change=0.18431862948372413 %)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,771 | INFO     | right removable region: 92
[2026-03-15 18:59:35] 2026-03-15 18:58:46,772 | INFO     | sum of square deviations: 291817564.5
[2026-03-15 18:59:35] 2026-03-15 18:58:46,772 | INFO     | sum of deviations: -1769822218.999998
[2026-03-15 18:59:35] 2026-03-15 18:58:46,772 | INFO     | mean x: 1773598152.5
[2026-03-15 18:59:35] 2026-03-15 18:58:46,773 | INFO     | mean y: 2600445.4897959186
[2026-03-15 18:59:35] 2026-03-15 18:58:46,773 | INFO     | intersect: 10759161392.224195
[2026-03-15 18:59:35] 2026-03-15 18:58:46,773 | INFO     | chi2: 1.0223989177404091
[2026-03-15 18:59:35] 2026-03-15 18:58:46,773 | INFO     | current chi2=1.0223989177404091 (change=65.19393126840497 %)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,773 | INFO     | sum of square deviations: 249388862.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | sum of deviations: -7739873248.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | mean x: 1773598305.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | mean y: 2621658.365591398
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | intersect: 55046884515.49208
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | chi2: 0.8710454496123992
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | current chi2=0.8710454496123992 (change=14.803758640757794 %)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,774 | INFO     | left removable region: 20
[2026-03-15 18:59:35] 2026-03-15 18:58:46,775 | INFO     | sum of square deviations: 115715658.0
[2026-03-15 18:59:35] 2026-03-15 18:58:46,775 | INFO     | sum of deviations: -979817532.4999999
[2026-03-15 18:59:35] 2026-03-15 18:58:46,778 | INFO     | mean x: 1773598274.5
[2026-03-15 18:59:35] 2026-03-15 18:58:46,778 | INFO     | mean y: 2649656.4305555555
[2026-03-15 18:59:35] 2026-03-15 18:58:46,778 | INFO     | intersect: 15020519450.394373
[2026-03-15 18:59:35] 2026-03-15 18:58:46,778 | INFO     | chi2: 0.0002775328222149415
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | current memory leak: -8.47 B/s (using 72 data points, chi2=0.00)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | could have reported an average CPU frequency of 2393 MHz (7 samples)
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | ..............................
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | . Timing measurements:
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | . get job = 0 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | . initial setup = 15 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,779 | INFO     | . payload setup = 15 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,780 | INFO     | . stage-in = 0 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,780 | INFO     | . payload execution = 6241 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,780 | INFO     | . stage-out = 1 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,780 | INFO     | . log creation = 0 s
[2026-03-15 18:59:35] 2026-03-15 18:58:46,780 | INFO     | ..............................
[2026-03-15 18:59:35] 2026-03-15 18:58:47,056 | INFO     | 
[2026-03-15 18:59:35] 2026-03-15 18:58:47,056 | INFO     | job summary report
[2026-03-15 18:59:35] 2026-03-15 18:58:47,056 | INFO     | --------------------------------------------------
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | PanDA job id: 7036368788
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | task id: 48700938
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | errors: (none)
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | pilot state: finished 
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | transexitcode: 0
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | exeerrorcode: 0
[2026-03-15 18:59:35] 2026-03-15 18:58:47,057 | INFO     | exeerrordiag: 
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | exitcode: 0
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | exitmsg: OK
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | cpuconsumptiontime: 36955 s
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | nevents: 400
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | neventsw: 0
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | pid: 719774
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | pgrp: 719774
[2026-03-15 18:59:35] 2026-03-15 18:58:47,058 | INFO     | corecount: 12
[2026-03-15 18:59:35] 2026-03-15 18:58:47,059 | INFO     | event service: False
[2026-03-15 18:59:35] 2026-03-15 18:58:47,059 | INFO     | sizes: {0: 2279745, 1: 2280206, 6261: 2307307, 6264: 2316351, 6266: 2316407, 6267: 2316601}
[2026-03-15 18:59:35] 2026-03-15 18:58:47,059 | INFO     | --------------------------------------------------
[2026-03-15 18:59:35] 2026-03-15 18:58:47,059 | INFO     | 
[2026-03-15 18:59:35] 2026-03-15 18:58:47,059 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31430/slots/0
[2026-03-15 18:59:35] 2026-03-15 18:58:47,120 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,120 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,120 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,121 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,124 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,125 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 18:59:35] 2026-03-15 18:58:47,126 | INFO     | job 7036368788 has completed (purged errors)
[2026-03-15 18:59:35] 2026-03-15 18:58:47,126 | INFO     | overall cleanup function is called
[2026-03-15 18:59:35] 2026-03-15 18:58:47,787 | WARNING  | process 719774 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 18:59:35] 2026-03-15 18:58:48,146 | INFO     | --- collectZombieJob: --- 10, [719774]
[2026-03-15 18:59:35] 2026-03-15 18:58:48,148 | INFO     | zombie collector waiting for pid 719774
[2026-03-15 18:59:35] 2026-03-15 18:58:48,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 18:59:35] 2026-03-15 18:58:48,148 | INFO     | collected zombie processes
[2026-03-15 18:59:35] 2026-03-15 18:58:48,148 | INFO     | will attempt to kill all subprocesses of pid=719774
[2026-03-15 18:59:35] 2026-03-15 18:58:48,507 | INFO     | using path: /opt/boinc/instance_homes/boinc_31430/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 18:59:35] 2026-03-15 18:58:49,622 | INFO     | process IDs to be killed: [719774] (in reverse order)
[2026-03-15 18:59:35] 2026-03-15 18:58:49,827 | INFO     | number of running child processes to parent process 719774: 1
[2026-03-15 18:59:35] 2026-03-15 18:58:49,828 | INFO     | maximum number of monitored processes: 6
[2026-03-15 18:59:35] 2026-03-15 18:58:49,828 | INFO     | aborting job monitoring since job object (job id=7036368788) has expired
[2026-03-15 18:59:35] 2026-03-15 18:58:50,030 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 18:59:35] 2026-03-15 18:58:50,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 18:59:35] 2026-03-15 18:58:50,065 | INFO     | did not find any defunct processes belonging to 719774
[2026-03-15 18:59:35] 2026-03-15 18:58:50,103 | INFO     | did not find any defunct processes belonging to 719774
[2026-03-15 18:59:35] 2026-03-15 18:58:50,103 | INFO     | ready for new job
[2026-03-15 18:59:35] 2026-03-15 18:58:50,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 18:59:35] 2026-03-15 18:58:50,109 | INFO     | **************************************
[2026-03-15 18:59:35] 2026-03-15 18:58:50,109 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 18:59:35] 2026-03-15 18:58:50,110 | INFO     | **************************************
[2026-03-15 18:59:35] 2026-03-15 18:58:50,110 | INFO     | 
[2026-03-15 18:59:35] 2026-03-15 18:58:50,127 | INFO     | architecture information:
[2026-03-15 18:59:35] 2026-03-15 18:58:50,132 | INFO     | executing command: cat /etc/os-release
[2026-03-15 18:59:35] 2026-03-15 18:58:50,175 | INFO     | cat /etc/os-release:
[2026-03-15 18:59:35] NAME="CentOS Linux"
[2026-03-15 18:59:35] VERSION="7 (Core)"
[2026-03-15 18:59:35] ID="centos"
[2026-03-15 18:59:35] ID_LIKE="rhel fedora"
[2026-03-15 18:59:35] VERSION_ID="7"
[2026-03-15 18:59:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 18:59:35] ANSI_COLOR="0;31"
[2026-03-15 18:59:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 18:59:35] HOME_URL="https://www.centos.org/"
[2026-03-15 18:59:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 18:59:35] 
[2026-03-15 18:59:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 18:59:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 18:59:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 18:59:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 18:59:35] 
[2026-03-15 18:59:35] 2026-03-15 18:58:50,176 | INFO     | **************************************
[2026-03-15 18:59:35] 2026-03-15 18:58:50,679 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31430/slots/0
[2026-03-15 18:59:35] 2026-03-15 18:58:50,725 | INFO     | sufficient remaining disk space (173026574336 B)
[2026-03-15 18:59:35] 2026-03-15 18:58:50,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 18:59:35] 2026-03-15 18:58:50,725 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 18:59:35] 2026-03-15 18:58:50,726 | INFO     | update_server=False
[2026-03-15 18:59:35] 2026-03-15 18:58:50,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 18:59:35] 2026-03-15 18:58:50,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:59:35] 2026-03-15 18:58:50,726 | INFO     | will abort loop
[2026-03-15 18:59:35] 2026-03-15 18:58:51,302 | INFO     | all data control threads have been joined
[2026-03-15 18:59:35] 2026-03-15 18:58:51,720 | INFO     | all job control threads have been joined
[2026-03-15 18:59:35] 2026-03-15 18:58:51,730 | INFO     | [job] retrieve thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:51,732 | INFO     | [job] job monitor thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:51,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 18:59:35] 2026-03-15 18:58:51,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 18:59:35] 2026-03-15 18:58:51,803 | INFO     | all payload control threads have been joined
[2026-03-15 18:59:35] 2026-03-15 18:58:51,919 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:51,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 18:59:35] 2026-03-15 18:58:52,110 | INFO     | [payload] validate_post thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,167 | INFO     | [payload] failed_post thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,317 | INFO     | [data] control thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,589 | INFO     | [job] validate thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,590 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,669 | INFO     | [data] copytool_in thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,725 | INFO     | [job] control thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,808 | INFO     | [payload] control thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,885 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,914 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:52,998 | INFO     | [job] queue monitor thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:53,738 | INFO     | [data] copytool_out thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:58:55,769 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 18:59:35] 2026-03-15 18:59:01,335 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-15 18:59:35] 2026-03-15 18:59:20,600 | INFO     | PID=714770 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 18:59:35] 2026-03-15 18:59:20,600 | INFO     | .. there are 20 such processes running
[2026-03-15 18:59:35] 2026-03-15 18:59:20,600 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 18:59:35] 2026-03-15 18:59:20,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 18:59:35] 2026-03-15 18:59:20,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 18:59:35] 2026-03-15 18:59:28,470 | INFO     | [monitor] cgroup control has ended
[2026-03-15 18:59:35] 2026-03-15 18:59:29,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134559494399808)>', '<ExcThread(monitor, started 134558951393024)>']
[2026-03-15 18:59:35] 2026-03-15 18:59:29,653 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 18:59:35] 2026-03-15 18:59:29,653 | INFO     | [monitor] control thread has ended
[2026-03-15 18:59:35] 2026-03-15 18:59:34,671 | INFO     | all workflow threads have been joined
[2026-03-15 18:59:35] 2026-03-15 18:59:34,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 18:59:35] 2026-03-15 18:59:34,672 | INFO     | traces error code: 0
[2026-03-15 18:59:35] 2026-03-15 18:59:34,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 18:59:35] 2026-03-15 18:59:34,845 [wrapper] ==== pilot stdout END ====
[2026-03-15 18:59:35] 2026-03-15 18:59:34,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 18:59:35] 2026-03-15 18:59:34,862 [wrapper] pilotpid: 714770
[2026-03-15 18:59:35] 2026-03-15 18:59:34,868 [wrapper] Pilot exit status: 0
[2026-03-15 18:59:35] 2026-03-15 18:59:34,898 [wrapper] pandaids: 7036368788
[2026-03-15 18:59:35] 2026-03-15 18:59:35,073 [wrapper] cleanup supervisor_pilot  857233 714771
[2026-03-15 18:59:35] 2026-03-15 18:59:35,088 [wrapper] Test setup, not cleaning
[2026-03-15 18:59:35] 2026-03-15 18:59:35,104 [wrapper] apfmon messages muted
[2026-03-15 18:59:35] 2026-03-15 18:59:35,115 [wrapper] ==== wrapper stdout END ====
[2026-03-15 18:59:35] 2026-03-15 18:59:35,124 [wrapper] ==== wrapper stderr END ====
[2026-03-15 18:59:35]  *** Error codes and diagnostics ***
[2026-03-15 18:59:35]     "exeErrorCode": 0,
[2026-03-15 18:59:35]     "exeErrorDiag": "",
[2026-03-15 18:59:35]     "pilotErrorCode": 0,
[2026-03-15 18:59:35]     "pilotErrorDiag": "",
[2026-03-15 18:59:35]  *** Listing of results directory ***
[2026-03-15 18:59:35] total 336344
[2026-03-15 18:59:35] -rw-r--r-- 1 boinc boinc    584627 Mar  3 16:29 pilot3.tar.gz
[2026-03-15 18:59:35] -rwx------ 1 boinc boinc     36322 Mar  3 16:33 runpilot2-wrapper.sh
[2026-03-15 18:59:35] -rw-r--r-- 1 boinc boinc      5111 Mar  3 16:33 queuedata.json
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc       100 Mar 15 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 18:59:35] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 17:13 run_atlas
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc       105 Mar 15 17:13 job.xml
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc 189219272 Mar 15 17:13 EVNT.48700936._000109.pool.root.1
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 17:13 start_atlas.sh
[2026-03-15 18:59:35] drwxrwx--x 2 boinc boinc      4096 Mar 15 17:13 shared
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc    597933 Mar 15 17:13 input.tar.gz
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc      6555 Mar 15 17:13 init_data.xml
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc         0 Mar 15 17:13 boinc_setup_complete
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc         0 Mar 15 17:13 boinc_lockfile
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc      2500 Mar 15 17:13 pandaJob.out
[2026-03-15 18:59:35] -rw------- 1 boinc boinc   1006473 Mar 15 17:14 agis_schedconf.cvmfs.json
[2026-03-15 18:59:35] -rw------- 1 boinc boinc   1511579 Mar 15 17:14 agis_ddmendpoints.agis.ALL.json
[2026-03-15 18:59:35] -rw------- 1 boinc boinc       420 Mar 15 17:14 workernode_map.json
[2026-03-15 18:59:35] drwx------ 5 boinc boinc      4096 Mar 15 17:14 pilot3
[2026-03-15 18:59:35] -rw------- 1 boinc boinc 148648309 Mar 15 18:57 HITS.48700938._002775.pool.root.1
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc       530 Mar 15 18:58 boinc_task_state.xml
[2026-03-15 18:59:35] -rw------- 1 boinc boinc      1020 Mar 15 18:58 memory_monitor_summary.json
[2026-03-15 18:59:35] -rw------- 1 boinc boinc    410559 Mar 15 18:58 log.48700938._002775.job.log.tgz.1
[2026-03-15 18:59:35] -rw------- 1 boinc boinc        95 Mar 15 18:58 pilot_heartbeat.json
[2026-03-15 18:59:35] -rw------- 1 boinc boinc      6274 Mar 15 18:58 heartbeat.json
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc      8192 Mar 15 18:59 boinc_mmap_file
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc        27 Mar 15 18:59 wrapper_checkpoint.txt
[2026-03-15 18:59:35] -rw------- 1 boinc boinc      4846 Mar 15 18:59 pilotlog.txt
[2026-03-15 18:59:35] -rw------- 1 boinc boinc    889135 Mar 15 18:59 log.48700938._002775.job.log.1
[2026-03-15 18:59:35] -rw------- 1 boinc boinc       357 Mar 15 18:59 output.list
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc       620 Mar 15 18:59 runtime_log
[2026-03-15 18:59:35] -rw------- 1 boinc boinc   1320960 Mar 15 18:59 result.tar.gz
[2026-03-15 18:59:35] -rw------- 1 boinc boinc       652 Mar 15 18:59 v0sKDmmrhH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmt2ELDmFHk5Mo.diag
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc      9166 Mar 15 18:59 runtime_log.err
[2026-03-15 18:59:35] -rw-rw-r-- 1 boinc boinc     20843 Mar 15 18:59 stderr.txt
[2026-03-15 18:59:35] HITS file was successfully produced:
[2026-03-15 18:59:35] -rw------- 1 boinc boinc 148648309 Mar 15 18:57 shared/HITS.pool.root.1
[2026-03-15 18:59:35]  *** Contents of shared directory: ***
[2026-03-15 18:59:35] total 331856
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc 189219272 Mar 15 17:13 ATLAS.root_0
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 17:13 start_atlas.sh
[2026-03-15 18:59:35] -rw-r--r-- 2 boinc boinc    597933 Mar 15 17:13 input.tar.gz
[2026-03-15 18:59:35] -rw------- 1 boinc boinc 148648309 Mar 15 18:57 HITS.pool.root.1
[2026-03-15 18:59:35] -rw------- 1 boinc boinc   1320960 Mar 15 18:59 result.tar.gz
18:59:36 (710570): run_atlas exited; CPU time 37328.139208
18:59:36 (710570): called boinc_finish(0)

</stderr_txt>
]]>

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