Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:47 (3657858): wrapper (7.7.26015): starting
07:46:47 (3657858): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 07:46:47] Arguments: --nthreads 4
[2026-03-13 07:46:47] Threads: 4
[2026-03-13 07:46:47] Checking for CVMFS
[2026-03-13 07:46:47] No cvmfs_config command found, will try listing directly
[2026-03-13 07:46:47] CVMFS is ok
[2026-03-13 07:46:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 07:46:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 07:46:47] Further information can be found at the LHC@home message board.
[2026-03-13 07:46:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:46:47] Checking for apptainer binary...
[2026-03-13 07:46:47] which: no apptainer in ((null))
[2026-03-13 07:46:47] apptainer is not installed, using version from CVMFS
[2026-03-13 07:46:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:46:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-13 07:46:47] apptainer works
[2026-03-13 07:46:47] Set ATHENA_PROC_NUMBER=4
[2026-03-13 07:46:47] Set ATHENA_CORE_NUMBER=4
[2026-03-13 07:46:47] Starting ATLAS job with PandaID=7036325754
[2026-03-13 07:46:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 09:50:24]  *** The last 200 lines of the pilot log: ***
[2026-03-13 09:50:24] 2026-03-13 08:49:30,742 | INFO     | preparing for final server update for job 7036325754 in state='finished'
[2026-03-13 09:50:24] 2026-03-13 08:49:30,742 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7036325754/jobReport.json
[2026-03-13 09:50:24] 2026-03-13 08:49:30,743 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | INFO     | this job has now completed (state=finished)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | INFO     | log transfer has been attempted: DONE
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | INFO     | job 7036325754 has finished - writing final server update
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1557677/.job.ad'
[2026-03-13 09:50:24] 2026-03-13 08:49:30,744 | INFO     | total number of processed events: 400 (read)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,760 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7036325754/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,761 | INFO     | extracted standard info from prmon json
[2026-03-13 09:50:24] 2026-03-13 08:49:30,761 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 09:50:24] 2026-03-13 08:49:30,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 09:50:24] 2026-03-13 08:49:30,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 09:50:24] 2026-03-13 08:49:30,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 09:50:24] 2026-03-13 08:49:30,762 | INFO     | fitting pss+swap vs Time
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | sum of square deviations: 535786790.0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | sum of deviations: 13274715476.500002
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | mean x: 1773388071.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | mean y: 2333114.3583333334
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | intersect: -43935334849.76139
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | chi2: 1.114387605210361
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | sum of square deviations: 471562330.0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | sum of deviations: 12663225765.000002
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | mean x: 1773387919.0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,763 | INFO     | mean y: 2331661.539130435
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | intersect: -47619817434.25598
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | chi2: 1.1156879019193193
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | current chi2=1.1156879019193193 (change=-0.1166826248675761 %)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | right removable region: 114
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | sum of square deviations: 471562330.0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | sum of deviations: 1289220299.0000002
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | mean x: 1773388224.0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | mean y: 2360836.730434783
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | intersect: -4845965568.791312
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | chi2: 0.0008015103016138141
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | current chi2=0.0008015103016138141 (change=99.9280761650734 %)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,764 | INFO     | sum of square deviations: 412686807.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | sum of deviations: 988130246.5000001
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | mean x: 1773388376.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | mean y: 2361604.918181818
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | intersect: -4243809248.535087
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | chi2: 0.0006045785921928809
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | current chi2=0.0006045785921928809 (change=24.570078391309227 %)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | left removable region: 20
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | sum of square deviations: 257521107.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | sum of deviations: 983271962.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | mean x: 1773388498.5
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | mean y: 2361019.904255319
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | intersect: -6768824480.66689
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | chi2: 0.00023345546549718968
[2026-03-13 09:50:24] 2026-03-13 08:49:30,765 | INFO     | current memory leak: 3.82 B/s (using 94 data points, chi2=0.00)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | could have reported an average CPU frequency of 3623 MHz (8 samples)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | ..............................
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . Timing measurements:
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . get job = 0 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . initial setup = 5 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . payload setup = 5 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . stage-in = 0 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . payload execution = 7324 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . stage-out = 0 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | . log creation = 0 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,766 | INFO     | ..............................
[2026-03-13 09:50:24] 2026-03-13 08:49:30,812 | INFO     | 
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | job summary report
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | --------------------------------------------------
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | PanDA job id: 7036325754
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | task id: 48841707
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | errors: (none)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | pilot state: finished 
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | transexitcode: 0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | exeerrorcode: 0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | exeerrordiag: 
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | exitcode: 0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | exitmsg: OK
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | cpuconsumptiontime: 28166 s
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | nevents: 400
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | neventsw: 0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | pid: 3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | pgrp: 3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | corecount: 4
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | event service: False
[2026-03-13 09:50:24] 2026-03-13 08:49:30,813 | INFO     | sizes: {0: 2280096, 11: 2280096, 7334: 2307462, 7335: 2316484, 7337: 2316540, 7340: 2316734}
[2026-03-13 09:50:24] 2026-03-13 08:49:30,814 | INFO     | --------------------------------------------------
[2026-03-13 09:50:24] 2026-03-13 08:49:30,814 | INFO     | 
[2026-03-13 09:50:24] 2026-03-13 08:49:30,814 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-13 09:50:24] 2026-03-13 08:49:30,833 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | job 7036325754 has completed (purged errors)
[2026-03-13 09:50:24] 2026-03-13 08:49:30,834 | INFO     | overall cleanup function is called
[2026-03-13 09:50:24] 2026-03-13 08:49:31,841 | INFO     | --- collectZombieJob: --- 10, [3735670]
[2026-03-13 09:50:24] 2026-03-13 08:49:31,842 | INFO     | zombie collector waiting for pid 3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:31,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 09:50:24] 2026-03-13 08:49:31,842 | INFO     | collected zombie processes
[2026-03-13 09:50:24] 2026-03-13 08:49:31,842 | INFO     | will attempt to kill all subprocesses of pid=3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:32,379 | INFO     | process IDs to be killed: [3735670] (in reverse order)
[2026-03-13 09:50:24] 2026-03-13 08:49:32,625 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 09:50:24] 2026-03-13 08:49:32,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 09:50:24] 2026-03-13 08:49:32,657 | INFO     | did not find any defunct processes belonging to 3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:32,688 | INFO     | did not find any defunct processes belonging to 3735670
[2026-03-13 09:50:24] 2026-03-13 08:49:32,688 | INFO     | ready for new job
[2026-03-13 09:50:24] 2026-03-13 08:49:32,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 09:50:24] 2026-03-13 08:49:32,690 | INFO     | **************************************
[2026-03-13 09:50:24] 2026-03-13 08:49:32,690 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 09:50:24] 2026-03-13 08:49:32,690 | INFO     | **************************************
[2026-03-13 09:50:24] 2026-03-13 08:49:32,690 | INFO     | 
[2026-03-13 09:50:24] 2026-03-13 08:49:32,696 | INFO     | architecture information:
[2026-03-13 09:50:24] 2026-03-13 08:49:32,697 | INFO     | executing command: cat /etc/os-release
[2026-03-13 09:50:24] 2026-03-13 08:49:32,714 | INFO     | cat /etc/os-release:
[2026-03-13 09:50:24] NAME="CentOS Linux"
[2026-03-13 09:50:24] VERSION="7 (Core)"
[2026-03-13 09:50:24] ID="centos"
[2026-03-13 09:50:24] ID_LIKE="rhel fedora"
[2026-03-13 09:50:24] VERSION_ID="7"
[2026-03-13 09:50:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 09:50:24] ANSI_COLOR="0;31"
[2026-03-13 09:50:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 09:50:24] HOME_URL="https://www.centos.org/"
[2026-03-13 09:50:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 09:50:24] 
[2026-03-13 09:50:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 09:50:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 09:50:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 09:50:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 09:50:24] 
[2026-03-13 09:50:24] 2026-03-13 08:49:32,714 | INFO     | **************************************
[2026-03-13 09:50:24] 2026-03-13 08:49:33,217 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-13 09:50:24] 2026-03-13 08:49:33,234 | INFO     | sufficient remaining disk space (21935161344 B)
[2026-03-13 09:50:24] 2026-03-13 08:49:33,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 09:50:24] 2026-03-13 08:49:33,234 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 09:50:24] 2026-03-13 08:49:33,234 | INFO     | update_server=False
[2026-03-13 09:50:24] 2026-03-13 08:49:33,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 09:50:24] 2026-03-13 08:49:33,381 | INFO     | all data control threads have been joined
[2026-03-13 09:50:24] 2026-03-13 08:49:33,447 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-13 09:50:24] 2026-03-13 08:49:33,447 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-13 09:50:24] 2026-03-13 08:49:33,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:50:24] 2026-03-13 08:49:33,447 | INFO     | will abort loop
[2026-03-13 09:50:24] 2026-03-13 08:49:34,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 09:50:24] 2026-03-13 08:49:34,240 | INFO     | [job] retrieve thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:34,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:34,387 | INFO     | [data] control thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:34,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 09:50:24] 2026-03-13 08:49:34,452 | INFO     | [job] job monitor thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:34,483 | INFO     | [data] copytool_in thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:34,527 | INFO     | all payload control threads have been joined
[2026-03-13 09:50:24] 2026-03-13 08:49:34,561 | INFO     | all job control threads have been joined
[2026-03-13 09:50:24] 2026-03-13 08:49:34,835 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,227 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,386 | INFO     | [payload] failed_post thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,532 | INFO     | [payload] control thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,545 | INFO     | [job] validate thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,564 | INFO     | [payload] validate_post thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,566 | INFO     | [job] control thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,646 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:35,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 09:50:24] 2026-03-13 08:49:36,006 | INFO     | [data] copytool_out thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:36,828 | INFO     | [job] queue monitor thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:49:38,441 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 09:50:24] 2026-03-13 08:50:02,787 | INFO     | PID=3687464 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 09:50:24] 2026-03-13 08:50:02,787 | INFO     | .. there are 43 such processes running
[2026-03-13 09:50:24] 2026-03-13 08:50:02,788 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 09:50:24] 2026-03-13 08:50:02,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 09:50:24] 2026-03-13 08:50:02,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 09:50:24] 2026-03-13 08:50:11,972 | INFO     | [monitor] cgroup control has ended
[2026-03-13 09:50:24] 2026-03-13 08:50:12,098 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22930669532992)>', '<ExcThread(monitor, started 22930433263360)>']
[2026-03-13 09:50:24] 2026-03-13 08:50:12,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 09:50:24] 2026-03-13 08:50:12,838 | INFO     | [monitor] control thread has ended
[2026-03-13 09:50:24] 2026-03-13 08:50:17,123 | INFO     | all workflow threads have been joined
[2026-03-13 09:50:24] 2026-03-13 08:50:17,123 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 09:50:24] 2026-03-13 08:50:17,123 | INFO     | traces error code: 0
[2026-03-13 09:50:24] 2026-03-13 08:50:17,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 09:50:24] 2026-03-13 08:50:17,250 [wrapper] ==== pilot stdout END ====
[2026-03-13 09:50:24] 2026-03-13 08:50:17,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 09:50:24] 2026-03-13 08:50:17,255 [wrapper] pilotpid: 3687464
[2026-03-13 09:50:24] 2026-03-13 08:50:17,257 [wrapper] Pilot exit status: 0
[2026-03-13 09:50:24] 2026-03-13 08:50:17,264 [wrapper] pandaids: 7036325754
[2026-03-13 09:50:24] 2026-03-13 08:50:17,394 [wrapper] cleanup supervisor_pilot  473418 3687465
[2026-03-13 09:50:24] 2026-03-13 08:50:17,397 [wrapper] Test setup, not cleaning
[2026-03-13 09:50:24] 2026-03-13 08:50:17,399 [wrapper] apfmon messages muted
[2026-03-13 09:50:24] 2026-03-13 08:50:17,401 [wrapper] ==== wrapper stdout END ====
[2026-03-13 09:50:24] 2026-03-13 08:50:17,403 [wrapper] ==== wrapper stderr END ====
[2026-03-13 09:50:24]  *** Error codes and diagnostics ***
[2026-03-13 09:50:24]     "exeErrorCode": 0,
[2026-03-13 09:50:24]     "exeErrorDiag": "",
[2026-03-13 09:50:24]     "pilotErrorCode": 0,
[2026-03-13 09:50:24]     "pilotErrorDiag": "",
[2026-03-13 09:50:24]  *** Listing of results directory ***
[2026-03-13 09:50:24] total 572624
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-13 09:50:24] -rwx------. 1 boinc boinc     36322 Mar  3 17:32 runpilot2-wrapper.sh
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc      5111 Mar  3 17:33 queuedata.json
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc       100 Mar 13 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 09:50:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 07:46 run_atlas
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc       105 Mar 13 07:46 job.xml
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc      6709 Mar 13 07:46 init_data.xml
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc 312865413 Mar 13 07:46 EVNT.48252644._000087.pool.root.1
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:46 start_atlas.sh
[2026-03-13 09:50:24] drwxrwx--x. 2 boinc boinc      4096 Mar 13 07:46 shared
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc    597945 Mar 13 07:46 input.tar.gz
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc         0 Mar 13 07:46 boinc_lockfile
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc      2492 Mar 13 07:46 pandaJob.out
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc   1006522 Mar 13 07:46 agis_schedconf.cvmfs.json
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc   1511578 Mar 13 07:46 agis_ddmendpoints.agis.ALL.json
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc       445 Mar 13 07:46 workernode_map.json
[2026-03-13 09:50:24] drwx------. 5 boinc boinc      4096 Mar 13 07:47 pilot3
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc 266865927 Mar 13 09:48 HITS.48841707._002228.pool.root.1
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc       528 Mar 13 09:49 boinc_task_state.xml
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc      1031 Mar 13 09:49 memory_monitor_summary.json
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc    299113 Mar 13 09:49 log.48841707._002228.job.log.tgz.1
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc      6348 Mar 13 09:49 heartbeat.json
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc        95 Mar 13 09:50 pilot_heartbeat.json
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc        26 Mar 13 09:50 wrapper_checkpoint.txt
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc      5016 Mar 13 09:50 pilotlog.txt
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc   1049400 Mar 13 09:50 log.48841707._002228.job.log.1
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc       357 Mar 13 09:50 output.list
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc       620 Mar 13 09:50 runtime_log
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc   1361920 Mar 13 09:50 result.tar.gz
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc      9221 Mar 13 09:50 runtime_log.err
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc       663 Mar 13 09:50 goZKDmeqhH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmn7GLDmEw4TBn.diag
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc      8192 Mar 13 09:50 boinc_mmap_file
[2026-03-13 09:50:24] -rw-r--r--. 1 boinc boinc     21144 Mar 13 09:50 stderr.txt
[2026-03-13 09:50:24] HITS file was successfully produced:
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc 266865927 Mar 13 09:48 shared/HITS.pool.root.1
[2026-03-13 09:50:24]  *** Contents of shared directory: ***
[2026-03-13 09:50:24] total 568088
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc 312865413 Mar 13 07:46 ATLAS.root_0
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:46 start_atlas.sh
[2026-03-13 09:50:24] -rw-r--r--. 2 boinc boinc    597945 Mar 13 07:46 input.tar.gz
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc 266865927 Mar 13 09:48 HITS.pool.root.1
[2026-03-13 09:50:24] -rw-------. 1 boinc boinc   1361920 Mar 13 09:50 result.tar.gz
09:50:25 (3657858): run_atlas exited; CPU time 28517.445215
09:50:25 (3657858): called boinc_finish(0)

</stderr_txt>
]]>

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