Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:36:30 (971363): wrapper (7.7.26015): starting
16:36:30 (971363): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 16:36:30] Arguments: --nthreads 8
[2026-03-11 16:36:30] Threads: 8
[2026-03-11 16:36:30] Checking for CVMFS
[2026-03-11 16:36:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 16:36:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 16:36:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 16:36:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 16:36:32] 2.13.3.0 9358 180043 341748 157169 1 205 32638773 32935937 26356 16776704 0 763079371 99.699 582105410 32809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 16:36:32] CVMFS is ok
[2026-03-11 16:36:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 16:36:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 16:36:32] Further information can be found at the LHC@home message board.
[2026-03-11 16:36:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 16:36:32] Checking for apptainer binary...
[2026-03-11 16:36:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 16:36:32] Running /usr/bin/apptainer --version
[2026-03-11 16:36:32] apptainer version 1.4.5-2.el9
[2026-03-11 16:36:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 16:36:33] c-6-6.aglt2.org
[2026-03-11 16:36:33] apptainer works
[2026-03-11 16:36:33] Set ATHENA_PROC_NUMBER=8
[2026-03-11 16:36:33] Set ATHENA_CORE_NUMBER=8
[2026-03-11 16:36:34] Starting ATLAS job with PandaID=7049938068
[2026-03-11 16:36:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:10:44 (2090790): wrapper (7.7.26015): starting
22:10:44 (2090790): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 22:10:44] Arguments: --nthreads 8
[2026-03-12 22:10:44] Threads: 8
[2026-03-12 22:10:44] This job has been restarted, cleaning up previous attempt
[2026-03-12 22:10:44] Checking for CVMFS
[2026-03-12 22:10:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 22:10:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 22:10:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 22:10:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 22:10:45] 2.13.3.0 9358 181818 338072 157222 1 491 17247087 32935936 24709 16776704 0 771807667 99.700 585751771 32800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-12 22:10:45] CVMFS is ok
[2026-03-12 22:10:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 22:10:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 22:10:45] Further information can be found at the LHC@home message board.
[2026-03-12 22:10:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 22:10:45] Checking for apptainer binary...
[2026-03-12 22:10:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 22:10:45] Running /usr/bin/apptainer --version
[2026-03-12 22:10:46] apptainer version 1.4.5-2.el9
[2026-03-12 22:10:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 22:10:47] c-6-6.aglt2.org
[2026-03-12 22:10:47] apptainer works
[2026-03-12 22:10:47] Set ATHENA_PROC_NUMBER=8
[2026-03-12 22:10:47] Set ATHENA_CORE_NUMBER=8
[2026-03-12 22:10:47] Starting ATLAS job with PandaID=7049938068
[2026-03-12 22:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 03:06:18]  *** The last 200 lines of the pilot log: ***
[2026-03-15 03:06:18] 2026-03-15 07:05:41,865 | INFO     | total number of processed events: 400 (read)
[2026-03-15 03:06:18] 2026-03-15 07:05:41,934 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7049938068/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 03:06:18] 2026-03-15 07:05:41,934 | INFO     | extracted standard info from prmon json
[2026-03-15 03:06:18] 2026-03-15 07:05:41,935 | INFO     | extracted standard memory fields from prmon json
[2026-03-15 03:06:18] 2026-03-15 07:05:41,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-15 03:06:18] 2026-03-15 07:05:41,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 03:06:18] 2026-03-15 07:05:41,935 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 03:06:18] 2026-03-15 07:05:42,055 | INFO     | fitting pss+swap vs Time
[2026-03-15 03:06:18] 2026-03-15 07:05:42,072 | INFO     | sum of square deviations: 9426686516855.875
[2026-03-15 03:06:18] 2026-03-15 07:05:42,635 | INFO     | sum of deviations: 3199896197295.8525
[2026-03-15 03:06:18] 2026-03-15 07:05:42,636 | INFO     | mean x: 1773463136.6270425
[2026-03-15 03:06:18] 2026-03-15 07:05:42,636 | INFO     | mean y: 2503407.591797501
[2026-03-15 03:06:18] 2026-03-15 07:05:42,636 | INFO     | intersect: -599500057.4422792
[2026-03-15 03:06:18] 2026-03-15 07:05:42,640 | INFO     | chi2: 3.6105947728819494
[2026-03-15 03:06:18] 2026-03-15 07:05:42,643 | INFO     | sum of square deviations: 9381453502833.904
[2026-03-15 03:06:18] 2026-03-15 07:05:42,912 | INFO     | monitor loop #9728: job 0:7049938068 is in state 'finished'
[2026-03-15 03:06:18] 2026-03-15 07:05:42,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-15 03:06:18] 2026-03-15 07:05:43,135 | INFO     | sum of deviations: 3378882959716.1216
[2026-03-15 03:06:18] 2026-03-15 07:05:43,135 | INFO     | mean x: 1773462984.128049
[2026-03-15 03:06:18] 2026-03-15 07:05:43,135 | INFO     | mean y: 2504010.1575738126
[2026-03-15 03:06:18] 2026-03-15 07:05:43,136 | INFO     | intersect: -636237508.4085454
[2026-03-15 03:06:18] 2026-03-15 07:05:43,150 | INFO     | chi2: 2.9236238822581644
[2026-03-15 03:06:18] 2026-03-15 07:05:43,151 | INFO     | current chi2=2.9236238822581644 (change=19.026529805654434 %)
[2026-03-15 03:06:18] 2026-03-15 07:05:43,151 | INFO     | right removable region: 3115
[2026-03-15 03:06:18] 2026-03-15 07:05:43,159 | INFO     | sum of square deviations: 9381452309063.922
[2026-03-15 03:06:18] 2026-03-15 07:05:43,228 | INFO     | time since job start (190435s) is within the limit (345600.0s)
[2026-03-15 03:06:18] 2026-03-15 07:05:43,544 | INFO     | sum of deviations: 2414763451183.373
[2026-03-15 03:06:18] 2026-03-15 07:05:43,544 | INFO     | mean x: 1773463289.128049
[2026-03-15 03:06:18] 2026-03-15 07:05:43,545 | INFO     | mean y: 2506053.775994865
[2026-03-15 03:06:18] 2026-03-15 07:05:43,545 | INFO     | intersect: -453979167.4369635
[2026-03-15 03:06:18] 2026-03-15 07:05:43,549 | INFO     | chi2: 1.2126168165885607
[2026-03-15 03:06:18] 2026-03-15 07:05:43,549 | INFO     | current chi2=1.2126168165885607 (change=66.41503982401605 %)
[2026-03-15 03:06:18] 2026-03-15 07:05:43,553 | INFO     | sum of square deviations: 9336363034221.959
[2026-03-15 03:06:18] 2026-03-15 07:05:43,801 | INFO     | sum of deviations: 2108542441241.2815
[2026-03-15 03:06:18] 2026-03-15 07:05:43,802 | INFO     | mean x: 1773463441.6290581
[2026-03-15 03:06:18] 2026-03-15 07:05:43,802 | INFO     | mean y: 2507089.324333012
[2026-03-15 03:06:18] 2026-03-15 07:05:43,802 | INFO     | intersect: -398015354.0466067
[2026-03-15 03:06:18] 2026-03-15 07:05:43,806 | INFO     | chi2: 0.8891508897233458
[2026-03-15 03:06:18] 2026-03-15 07:05:43,806 | INFO     | current chi2=0.8891508897233458 (change=26.67503224763264 %)
[2026-03-15 03:06:18] 2026-03-15 07:05:43,810 | INFO     | sum of square deviations: 9291418459767.492
[2026-03-15 03:06:18] 2026-03-15 07:05:44,032 | INFO     | sum of deviations: 1955190636543.6877
[2026-03-15 03:06:18] 2026-03-15 07:05:44,032 | INFO     | mean x: 1773463594.130071
[2026-03-15 03:06:18] 2026-03-15 07:05:44,032 | INFO     | mean y: 2507609.6146168704
[2026-03-15 03:06:18] 2026-03-15 07:05:44,032 | INFO     | intersect: -370681847.78724027
[2026-03-15 03:06:18] 2026-03-15 07:05:44,036 | INFO     | chi2: 0.8137739534659139
[2026-03-15 03:06:18] 2026-03-15 07:05:44,036 | INFO     | current chi2=0.8137739534659139 (change=8.477406605405863 %)
[2026-03-15 03:06:18] 2026-03-15 07:05:44,036 | INFO     | left removable region: 30
[2026-03-15 03:06:18] 2026-03-15 07:05:44,040 | INFO     | sum of square deviations: 9104228127376.365
[2026-03-15 03:06:18] 2026-03-15 07:05:44,399 | INFO     | sum of deviations: 1908487972758.6519
[2026-03-15 03:06:18] 2026-03-15 07:05:44,400 | INFO     | mean x: 1773463868.6333873
[2026-03-15 03:06:18] 2026-03-15 07:05:44,400 | INFO     | mean y: 2508969.486871961
[2026-03-15 03:06:18] 2026-03-15 07:05:44,400 | INFO     | intersect: -369256150.63696057
[2026-03-15 03:06:18] 2026-03-15 07:05:44,414 | INFO     | chi2: 0.03523932039985678
[2026-03-15 03:06:18] 2026-03-15 07:05:44,434 | INFO     | current memory leak: 0.21 B/s (using 3085 data points, chi2=0.04)
[2026-03-15 03:06:18] 2026-03-15 07:05:44,436 | INFO     | could have reported an average CPU frequency of 2600 MHz (108 samples)
[2026-03-15 03:06:18] 2026-03-15 07:05:44,436 | INFO     | ..............................
[2026-03-15 03:06:18] 2026-03-15 07:05:44,436 | INFO     | . Timing measurements:
[2026-03-15 03:06:18] 2026-03-15 07:05:44,447 | INFO     | . get job = 0 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . initial setup = 5 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . payload setup = 29 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . stage-in = 0 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . payload execution = 190377 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . stage-out = 6 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | . log creation = 2 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,448 | INFO     | ..............................
[2026-03-15 03:06:18] 2026-03-15 07:05:44,924 | INFO     | 
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | job summary report
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | --------------------------------------------------
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | PanDA job id: 7049938068
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | task id: 48967094
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | errors: (none)
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 03:06:18] 2026-03-15 07:05:44,925 | INFO     | pilot state: finished 
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | transexitcode: 0
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | exeerrorcode: 0
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | exeerrordiag: 
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | exitcode: 0
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | exitmsg: OK
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | cpuconsumptiontime: 63873 s
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | nevents: 400
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | neventsw: 0
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | pid: 2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:44,926 | INFO     | pgrp: 2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | corecount: 8
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | event service: False
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | sizes: {0: 2279733, 1: 2280250, 12: 2280250, 190411: 2388894, 190412: 2388893, 190419: 2397947, 190420: 2398131, 190424: 2398325}
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | --------------------------------------------------
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | 
[2026-03-15 03:06:18] 2026-03-15 07:05:44,927 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-15 03:06:18] 2026-03-15 07:05:45,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,053 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,053 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,054 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,054 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,054 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 03:06:18] 2026-03-15 07:05:45,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 03:06:18] 2026-03-15 07:05:45,060 | INFO     | job 7049938068 has completed (purged errors)
[2026-03-15 03:06:18] 2026-03-15 07:05:45,060 | INFO     | overall cleanup function is called
[2026-03-15 03:06:18] 2026-03-15 07:05:46,075 | INFO     | --- collectZombieJob: --- 10, [2108746]
[2026-03-15 03:06:18] 2026-03-15 07:05:46,075 | INFO     | zombie collector waiting for pid 2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:46,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 03:06:18] 2026-03-15 07:05:46,075 | INFO     | collected zombie processes
[2026-03-15 03:06:18] 2026-03-15 07:05:46,075 | INFO     | will attempt to kill all subprocesses of pid=2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:46,906 | INFO     | process IDs to be killed: [2108746] (in reverse order)
[2026-03-15 03:06:18] 2026-03-15 07:05:47,265 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 03:06:18] 2026-03-15 07:05:47,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 03:06:18] 2026-03-15 07:05:47,301 | INFO     | did not find any defunct processes belonging to 2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:47,319 | INFO     | did not find any defunct processes belonging to 2108746
[2026-03-15 03:06:18] 2026-03-15 07:05:47,320 | INFO     | ready for new job
[2026-03-15 03:06:18] 2026-03-15 07:05:47,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 03:06:18] 2026-03-15 07:05:47,336 | INFO     | **************************************
[2026-03-15 03:06:18] 2026-03-15 07:05:47,336 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-15 03:06:18] 2026-03-15 07:05:47,336 | INFO     | **************************************
[2026-03-15 03:06:18] 2026-03-15 07:05:47,336 | INFO     | 
[2026-03-15 03:06:18] 2026-03-15 07:05:47,353 | INFO     | architecture information:
[2026-03-15 03:06:18] 2026-03-15 07:05:47,362 | INFO     | executing command: cat /etc/os-release
[2026-03-15 03:06:18] 2026-03-15 07:05:47,519 | INFO     | cat /etc/os-release:
[2026-03-15 03:06:18] NAME="CentOS Linux"
[2026-03-15 03:06:18] VERSION="7 (Core)"
[2026-03-15 03:06:18] ID="centos"
[2026-03-15 03:06:18] ID_LIKE="rhel fedora"
[2026-03-15 03:06:18] VERSION_ID="7"
[2026-03-15 03:06:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 03:06:18] ANSI_COLOR="0;31"
[2026-03-15 03:06:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 03:06:18] HOME_URL="https://www.centos.org/"
[2026-03-15 03:06:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 03:06:18] 
[2026-03-15 03:06:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 03:06:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 03:06:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 03:06:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 03:06:18] 
[2026-03-15 03:06:18] 2026-03-15 07:05:47,519 | INFO     | **************************************
[2026-03-15 03:06:18] 2026-03-15 07:05:48,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-15 03:06:18] 2026-03-15 07:05:48,116 | INFO     | sufficient remaining disk space (75337039872 B)
[2026-03-15 03:06:18] 2026-03-15 07:05:48,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 03:06:18] 2026-03-15 07:05:48,117 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 03:06:18] 2026-03-15 07:05:48,117 | INFO     | update_server=False
[2026-03-15 03:06:18] 2026-03-15 07:05:48,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 03:06:18] 2026-03-15 07:05:48,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 03:06:18] 2026-03-15 07:05:48,419 | INFO     | all job control threads have been joined
[2026-03-15 03:06:18] 2026-03-15 07:05:48,499 | INFO     | all data control threads have been joined
[2026-03-15 03:06:18] 2026-03-15 07:05:48,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:06:18] 2026-03-15 07:05:48,941 | INFO     | aborting loop
[2026-03-15 03:06:18] 2026-03-15 07:05:49,108 | INFO     | all payload control threads have been joined
[2026-03-15 03:06:18] 2026-03-15 07:05:49,123 | INFO     | [job] retrieve thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,143 | INFO     | [payload] validate_post thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,434 | INFO     | [job] control thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,511 | INFO     | [data] control thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,537 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,656 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:49,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 03:06:18] 2026-03-15 07:05:49,947 | INFO     | [job] job monitor thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,114 | INFO     | [payload] control thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,125 | INFO     | [data] copytool_out thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,138 | INFO     | [job] validate thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,154 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,439 | INFO     | [data] copytool_in thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,713 | INFO     | [payload] failed_post thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:50,939 | INFO     | [job] queue monitor thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:51,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 03:06:18] 2026-03-15 07:05:55,405 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 03:06:18] 2026-03-15 07:05:57,296 | INFO     | [monitor] cgroup control has ended
[2026-03-15 03:06:18] 2026-03-15 07:05:57,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945745000256)>', '<ExcThread(monitor, started 139945259820800)>']
[2026-03-15 03:06:18] 2026-03-15 07:06:02,456 | INFO     | all workflow threads have been joined
[2026-03-15 03:06:18] 2026-03-15 07:06:02,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 03:06:18] 2026-03-15 07:06:02,456 | INFO     | traces error code: 0
[2026-03-15 03:06:18] 2026-03-15 07:06:02,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 03:06:18] 2026-03-15 07:06:17,156 | INFO     | PID=2099769 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | INFO     | .. there are 41 such processes running
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 03:06:18] 2026-03-15 07:06:17,161 | INFO     | [monitor] control thread has ended
[2026-03-15 03:06:18] 2026-03-15 07:06:17,439 [wrapper] ==== pilot stdout END ====
[2026-03-15 03:06:18] 2026-03-15 07:06:17,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 03:06:18] 2026-03-15 07:06:17,445 [wrapper] pilotpid: 2099769
[2026-03-15 03:06:18] 2026-03-15 07:06:17,447 [wrapper] Pilot exit status: 0
[2026-03-15 03:06:18] 2026-03-15 07:06:17,459 [wrapper] pandaids: 7049938068 7049938068
[2026-03-15 03:06:18] 2026-03-15 07:06:17,539 [wrapper] cleanup supervisor_pilot 2453807 2099770
[2026-03-15 03:06:18] 2026-03-15 07:06:17,542 [wrapper] Test setup, not cleaning
[2026-03-15 03:06:18] 2026-03-15 07:06:17,545 [wrapper] apfmon messages muted
[2026-03-15 03:06:18] 2026-03-15 07:06:17,547 [wrapper] ==== wrapper stdout END ====
[2026-03-15 03:06:18] 2026-03-15 07:06:17,549 [wrapper] ==== wrapper stderr END ====
[2026-03-15 03:06:18]  *** Error codes and diagnostics ***
[2026-03-15 03:06:18]     "exeErrorCode": 0,
[2026-03-15 03:06:18]     "exeErrorDiag": "",
[2026-03-15 03:06:18]     "pilotErrorCode": 0,
[2026-03-15 03:06:18]     "pilotErrorDiag": "",
[2026-03-15 03:06:18]  *** Listing of results directory ***
[2026-03-15 03:06:18] total 694140
[2026-03-15 03:06:18] drwx------. 5 boincer umatlas      4096 Mar 10 12:00 pilot3
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas    585013 Mar 11 11:44 pilot3.tar.gz
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas      5111 Mar 11 11:46 queuedata.json
[2026-03-15 03:06:18] -rwx------. 1 boincer umatlas     36322 Mar 11 11:46 runpilot2-wrapper.sh
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas       100 Mar 11 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 03:06:18] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 16:36 run_atlas
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas       105 Mar 11 16:36 job.xml
[2026-03-15 03:06:18] -rw-r--r--. 3 boincer umatlas 221853671 Mar 11 16:36 EVNT.48967092._000013.pool.root.1
[2026-03-15 03:06:18] -rw-r--r--. 3 boincer umatlas 221853671 Mar 11 16:36 ATLAS.root_0
[2026-03-15 03:06:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 16:36 start_atlas.sh
[2026-03-15 03:06:18] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 16:36 shared
[2026-03-15 03:06:18] -rw-r--r--. 2 boincer umatlas    597527 Mar 11 16:36 input.tar.gz
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas         0 Mar 11 16:36 boinc_lockfile
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas      2596 Mar 12 22:10 pandaJob.out
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas        57 Mar 12 22:10 setup.sh.local
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas   1006514 Mar 12 22:11 agis_schedconf.cvmfs.json
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas       432 Mar 12 22:11 workernode_map.json
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas      6661 Mar 15 03:01 init_data.xml
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas 215168860 Mar 15 03:04 HITS.48967094._002337.pool.root.1
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas       533 Mar 15 03:04 boinc_task_state.xml
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas      1064 Mar 15 03:05 memory_monitor_summary.json
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas        96 Mar 15 03:05 pilot_heartbeat.json
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas   1511579 Mar 15 03:05 agis_ddmendpoints.agis.ALL.json
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas   2514494 Mar 15 03:05 log.48967094._002337.job.log.tgz.1
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas      6413 Mar 15 03:05 heartbeat.json
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas       823 Mar 15 03:06 pilotlog.txt
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas      8192 Mar 15 03:06 boinc_mmap_file
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas  21478672 Mar 15 03:06 log.48967094._002337.job.log.1
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas        30 Mar 15 03:06 wrapper_checkpoint.txt
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas       357 Mar 15 03:06 output.list
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas       620 Mar 15 03:06 runtime_log
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas  24012800 Mar 15 03:06 result.tar.gz
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas       787 Mar 15 03:06 Z4uMDmhwaK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxNhLDmvGw3Rm.diag
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas      9413 Mar 15 03:06 runtime_log.err
[2026-03-15 03:06:18] -rw-r--r--. 1 boincer umatlas     23362 Mar 15 03:06 stderr.txt
[2026-03-15 03:06:18] HITS file was successfully produced:
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas 215168860 Mar 15 03:04 shared/HITS.pool.root.1
[2026-03-15 03:06:18]  *** Contents of shared directory: ***
[2026-03-15 03:06:18] total 450840
[2026-03-15 03:06:18] -rw-r--r--. 3 boincer umatlas 221853671 Mar 11 16:36 ATLAS.root_0
[2026-03-15 03:06:18] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 16:36 start_atlas.sh
[2026-03-15 03:06:18] -rw-r--r--. 2 boincer umatlas    597527 Mar 11 16:36 input.tar.gz
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas 215168860 Mar 15 03:04 HITS.pool.root.1
[2026-03-15 03:06:18] -rw-------. 1 boincer umatlas  24012800 Mar 15 03:06 result.tar.gz
03:06:20 (2090790): run_atlas exited; CPU time 73892.865540
03:06:20 (2090790): called boinc_finish(0)

</stderr_txt>
]]>

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