Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:11:03 (11405): wrapper (7.7.26015): starting
00:11:03 (11405): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:11:03] Arguments: --nthreads 8
[2026-03-12 00:11:03] Threads: 8
[2026-03-12 00:11:03] Checking for CVMFS
[2026-03-12 00:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:11:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:11:03] 2.11.0.0 5763 10905 68032 157175 3 3 4006583 4096000 917 130560 1 1721448 99.602 1015515 281 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-12 00:11:03] CVMFS is ok
[2026-03-12 00:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 00:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 00:11:03] Further information can be found at the LHC@home message board.
[2026-03-12 00:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:11:03] Checking for apptainer binary...
[2026-03-12 00:11:03] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-12 00:11:03] apptainer is not installed, using version from CVMFS
[2026-03-12 00:11:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:11:03] WARNING: Environment variable TMPDIR already has value [/tmp/job_11294846/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node011
[2026-03-12 00:11:03] apptainer works
[2026-03-12 00:11:03] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:11:03] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:11:03] Starting ATLAS job with PandaID=7038493118
[2026-03-12 00:11:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11294846/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 00:55:21]  *** The last 200 lines of the pilot log: ***
[2026-03-12 00:55:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-12 00:55:21]  is_altstaged=None
[2026-03-12 00:55:21]  is_tar=False
[2026-03-12 00:55:21]  lfn=log.48955010._000622.job.log.tgz.1
[2026-03-12 00:55:21]  mtime=0
[2026-03-12 00:55:21]  protocol_id=None
[2026-03-12 00:55:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-12 00:55:21]  replicas=None
[2026-03-12 00:55:21]  scope=mc23_13p6TeV
[2026-03-12 00:55:21]  status=None
[2026-03-12 00:55:21]  status_code=0
[2026-03-12 00:55:21]  storage_token=
[2026-03-12 00:55:21]  surl=/tmp/job_11294846/atlas/pilot/slots/0/PanDA_Pilot-7038493118/log.48955010._000622.job.log.tgz.1
[2026-03-12 00:55:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/09/log.48955010._000622.job.log.tgz.1
[2026-03-12 00:55:21]  workdir=None
[2026-03-12 00:55:21] ]
[2026-03-12 00:55:21] 2026-03-11 23:54:20,019 | INFO     | transferring file log.48955010._000622.job.log.tgz.1 from /tmp/job_11294846/atlas/pilot/slots/0/PanDA_Pilot-7038493118/log.48955010._000622.job.log.tgz.1 to /tmp/j
[2026-03-12 00:55:21] 2026-03-11 23:54:20,019 | INFO     | executing command: /usr/bin/env mv /tmp/job_11294846/atlas/pilot/slots/0/PanDA_Pilot-7038493118/log.48955010._000622.job.log.tgz.1 /tmp/job_11294846/atlas/pilot/sl
[2026-03-12 00:55:21] 2026-03-11 23:54:20,027 | INFO     | adding to output.list: log.48955010._000622.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/09/log.48955010._000622.job.log.tg
[2026-03-12 00:55:21] 2026-03-11 23:54:20,028 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-12 00:55:21] 2026-03-11 23:54:20,028 | INFO     | summary of transferred files:
[2026-03-12 00:55:21] 2026-03-11 23:54:20,028 | INFO     |  -- lfn=log.48955010._000622.job.log.tgz.1, status_code=0, status=transferred
[2026-03-12 00:55:21] 2026-03-11 23:54:20,028 | INFO     | stage-out finished correctly
[2026-03-12 00:55:21] 2026-03-11 23:54:20,274 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-12 00:55:21] 2026-03-11 23:54:20,378 | INFO     | time since job start (2590s) is within the limit (349056.0s)
[2026-03-12 00:55:21] 2026-03-11 23:54:22,383 | INFO     | time since job start (2592s) is within the limit (349056.0s)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,197 | INFO     | job 7038493118 has state=finished
[2026-03-12 00:55:21] 2026-03-11 23:54:23,197 | INFO     | preparing for final server update for job 7038493118 in state='finished'
[2026-03-12 00:55:21] 2026-03-11 23:54:23,197 | INFO     | reading metadata from: /tmp/job_11294846/atlas/pilot/slots/0/PanDA_Pilot-7038493118/jobReport.json
[2026-03-12 00:55:21] 2026-03-11 23:54:23,198 | INFO     | added worker_node to metadata from /tmp/job_11294846/atlas/pilot/slots/0/workernode_map.json
[2026-03-12 00:55:21] 2026-03-11 23:54:23,199 | INFO     | this job has now completed (state=finished)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,199 | INFO     | log transfer has been attempted: DONE
[2026-03-12 00:55:21] 2026-03-11 23:54:23,199 | INFO     | job 7038493118 has finished - writing final server update
[2026-03-12 00:55:21] 2026-03-11 23:54:23,199 | INFO     | total number of processed events: 400 (read)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | INFO     | using path: /tmp/job_11294846/atlas/pilot/slots/0/PanDA_Pilot-7038493118/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | INFO     | extracted standard info from prmon json
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 00:55:21] 2026-03-11 23:54:23,217 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | fitting pss+swap vs Time
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | sum of square deviations: 14456085.0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | sum of deviations: 147968553.99999997
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | mean x: 1773272058.5
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | mean y: 2504672.8333333335
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | intersect: -18148225787.37414
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | chi2: 8.929913158290122e-05
[2026-03-12 00:55:21] 2026-03-11 23:54:23,218 | INFO     | current memory leak: 10.24 B/s (using 36 data points, chi2=0.00)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | could have reported an average CPU frequency of 2485 MHz (5 samples)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | ..............................
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . Timing measurements:
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . get job = 0 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . initial setup = 2 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . payload setup = 2 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . stage-in = 0 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . payload execution = 2571 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . stage-out = 0 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | . log creation = 0 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,219 | INFO     | ..............................
[2026-03-12 00:55:21] 2026-03-11 23:54:23,265 | INFO     | 
[2026-03-12 00:55:21] 2026-03-11 23:54:23,265 | INFO     | job summary report
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | --------------------------------------------------
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | PanDA job id: 7038493118
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | task id: 48955010
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | errors: (none)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | pilot state: finished 
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | transexitcode: 0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | exeerrorcode: 0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | exeerrordiag: 
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | exitcode: 0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | exitmsg: OK
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | cpuconsumptiontime: 18776 s
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | nevents: 400
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | neventsw: 0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | pid: 22017
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | pgrp: 22017
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | corecount: 8
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | event service: False
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | sizes: {0: 2279804, 1: 2280376, 11: 2280376, 2577: 2305735, 2578: 2305734, 2579: 2315002, 2582: 2315172}
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | --------------------------------------------------
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | 
[2026-03-12 00:55:21] 2026-03-11 23:54:23,266 | INFO     | executing command: ls -lF /tmp/job_11294846/atlas/pilot/slots/0
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | job 7038493118 has completed (purged errors)
[2026-03-12 00:55:21] 2026-03-11 23:54:23,277 | INFO     | overall cleanup function is called
[2026-03-12 00:55:21] 2026-03-11 23:54:24,283 | INFO     | --- collectZombieJob: --- 10, [22017]
[2026-03-12 00:55:21] 2026-03-11 23:54:24,283 | INFO     | zombie collector waiting for pid 22017
[2026-03-12 00:55:21] 2026-03-11 23:54:24,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 00:55:21] 2026-03-11 23:54:24,283 | INFO     | collected zombie processes
[2026-03-12 00:55:21] 2026-03-11 23:54:24,283 | INFO     | will attempt to kill all subprocesses of pid=22017
[2026-03-12 00:55:21] 2026-03-11 23:54:24,388 | INFO     | process IDs to be killed: [22017] (in reverse order)
[2026-03-12 00:55:21] 2026-03-11 23:54:24,425 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 00:55:21] 2026-03-11 23:54:24,425 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 00:55:21] 2026-03-11 23:54:24,429 | INFO     | did not find any defunct processes belonging to 22017
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | did not find any defunct processes belonging to 22017
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | ready for new job
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | **************************************
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 00:55:21] 2026-03-11 23:54:24,432 | INFO     | **************************************
[2026-03-12 00:55:21] 2026-03-11 23:54:24,433 | INFO     | 
[2026-03-12 00:55:21] 2026-03-11 23:54:24,446 | INFO     | architecture information:
[2026-03-12 00:55:21] 2026-03-11 23:54:24,447 | INFO     | executing command: cat /etc/os-release
[2026-03-12 00:55:21] 2026-03-11 23:54:24,453 | INFO     | cat /etc/os-release:
[2026-03-12 00:55:21] NAME="CentOS Linux"
[2026-03-12 00:55:21] VERSION="7 (Core)"
[2026-03-12 00:55:21] ID="centos"
[2026-03-12 00:55:21] ID_LIKE="rhel fedora"
[2026-03-12 00:55:21] VERSION_ID="7"
[2026-03-12 00:55:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 00:55:21] ANSI_COLOR="0;31"
[2026-03-12 00:55:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 00:55:21] HOME_URL="https://www.centos.org/"
[2026-03-12 00:55:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 00:55:21] 
[2026-03-12 00:55:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 00:55:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 00:55:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 00:55:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 00:55:21] 
[2026-03-12 00:55:21] 2026-03-11 23:54:24,453 | INFO     | **************************************
[2026-03-12 00:55:21] 2026-03-11 23:54:24,955 | INFO     | executing command: df -mP /tmp/job_11294846/atlas/pilot/slots/0
[2026-03-12 00:55:21] 2026-03-11 23:54:24,962 | INFO     | sufficient remaining disk space (223129632768 B)
[2026-03-12 00:55:21] 2026-03-11 23:54:24,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 00:55:21] 2026-03-11 23:54:24,962 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 00:55:21] 2026-03-11 23:54:24,962 | INFO     | update_server=False
[2026-03-12 00:55:21] 2026-03-11 23:54:24,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 00:55:21] 2026-03-11 23:54:24,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:55:21] 2026-03-11 23:54:25,089 | WARNING  | process 22017 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 00:55:21] 2026-03-11 23:54:25,170 | INFO     | using path: /tmp/job_11294846/atlas/pilot/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 00:55:21] 2026-03-11 23:54:25,269 | INFO     | number of running child processes to parent process 22017: 1
[2026-03-12 00:55:21] 2026-03-11 23:54:25,269 | INFO     | maximum number of monitored processes: 6
[2026-03-12 00:55:21] 2026-03-11 23:54:25,269 | INFO     | aborting job monitoring since job object (job id=7038493118) has expired
[2026-03-12 00:55:21] 2026-03-11 23:54:25,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 00:55:21] 2026-03-11 23:54:25,270 | INFO     | will abort loop
[2026-03-12 00:55:21] 2026-03-11 23:54:25,321 | INFO     | all job control threads have been joined
[2026-03-12 00:55:21] 2026-03-11 23:54:25,510 | INFO     | all payload control threads have been joined
[2026-03-12 00:55:21] 2026-03-11 23:54:25,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 00:55:21] 2026-03-11 23:54:25,840 | INFO     | all data control threads have been joined
[2026-03-12 00:55:21] 2026-03-11 23:54:25,968 | INFO     | [job] retrieve thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:25,968 | INFO     | [job] queue monitor thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,007 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,275 | INFO     | [job] job monitor thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 00:55:21] 2026-03-11 23:54:26,326 | INFO     | [job] control thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,457 | INFO     | [payload] validate_post thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,515 | INFO     | [payload] control thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,663 | INFO     | [job] validate thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,701 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,845 | INFO     | [data] control thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:26,876 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:27,003 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:27,170 | INFO     | [data] copytool_in thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:27,217 | INFO     | [payload] failed_post thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:27,589 | INFO     | [data] copytool_out thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:30,331 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 00:55:21] 2026-03-11 23:54:55,578 | INFO     | PID=16365 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 00:55:21] 2026-03-11 23:54:55,578 | INFO     | .. there are 5 such processes running
[2026-03-12 00:55:21] 2026-03-11 23:54:55,578 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 00:55:21] 2026-03-11 23:54:55,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 00:55:21] 2026-03-11 23:54:55,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 00:55:21] 2026-03-11 23:55:14,444 | INFO     | [monitor] cgroup control has ended
[2026-03-12 00:55:21] 2026-03-11 23:55:15,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065292032)>']
[2026-03-12 00:55:21] 2026-03-11 23:55:16,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 00:55:21] 2026-03-11 23:55:16,681 | INFO     | [monitor] control thread has ended
[2026-03-12 00:55:21] 2026-03-11 23:55:20,860 | INFO     | all workflow threads have been joined
[2026-03-12 00:55:21] 2026-03-11 23:55:20,860 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 00:55:21] 2026-03-11 23:55:20,860 | INFO     | traces error code: 0
[2026-03-12 00:55:21] 2026-03-11 23:55:20,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 00:55:21] 2026-03-11 23:55:20,911 [wrapper] ==== pilot stdout END ====
[2026-03-12 00:55:21] 2026-03-11 23:55:20,912 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 00:55:21] 2026-03-11 23:55:20,913 [wrapper] pilotpid: 16365
[2026-03-12 00:55:21] 2026-03-11 23:55:20,914 [wrapper] Pilot exit status: 0
[2026-03-12 00:55:21] 2026-03-11 23:55:20,918 [wrapper] pandaids: 7038493118
[2026-03-12 00:55:21] 2026-03-11 23:55:20,943 [wrapper] cleanup supervisor_pilot 32089 16366
[2026-03-12 00:55:21] 2026-03-11 23:55:20,944 [wrapper] Test setup, not cleaning
[2026-03-12 00:55:21] 2026-03-11 23:55:20,946 [wrapper] apfmon messages muted
[2026-03-12 00:55:21] 2026-03-11 23:55:20,947 [wrapper] ==== wrapper stdout END ====
[2026-03-12 00:55:21] 2026-03-11 23:55:20,948 [wrapper] ==== wrapper stderr END ====
[2026-03-12 00:55:21]  *** Error codes and diagnostics ***
[2026-03-12 00:55:21]     "exeErrorCode": 0,
[2026-03-12 00:55:21]     "exeErrorDiag": "",
[2026-03-12 00:55:21]     "pilotErrorCode": 0,
[2026-03-12 00:55:21]     "pilotErrorDiag": "",
[2026-03-12 00:55:21]  *** Listing of results directory ***
[2026-03-12 00:55:21] total 612524
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-12 00:55:21] -rwx------ 1 mf493845 unix-user     36322 Mar  3 14:59 runpilot2-wrapper.sh
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      5111 Mar  3 15:00 queuedata.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       100 Mar 11 22:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 00:55:21] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar 11 22:20 run_atlas
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       105 Mar 11 22:20 job.xml
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user 434830011 Mar 12 00:11 EVNT.46701403._001013.pool.root.1
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 00:11 start_atlas.sh
[2026-03-12 00:55:21] drwxrwx--x 2 mf493845 unix-user       100 Mar 12 00:11 shared
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user    597933 Mar 12 00:11 input.tar.gz
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      6390 Mar 12 00:11 init_data.xml
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user         0 Mar 12 00:11 boinc_setup_complete
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      8192 Mar 12 00:11 boinc_mmap_file
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user         0 Mar 12 00:11 boinc_lockfile
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      2560 Mar 12 00:11 pandaJob.out
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user   1006243 Mar 12 00:11 agis_schedconf.cvmfs.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user   1511578 Mar 12 00:11 agis_ddmendpoints.agis.ALL.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       420 Mar 12 00:11 workernode_map.json
[2026-03-12 00:55:21] drwx------ 5 mf493845 unix-user       440 Mar 12 00:11 pilot3
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user 187028716 Mar 12 00:53 HITS.48955010._000622.pool.root.1
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      1013 Mar 12 00:54 memory_monitor_summary.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user    306150 Mar 12 00:54 log.48955010._000622.job.log.tgz.1
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      6317 Mar 12 00:54 heartbeat.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user        95 Mar 12 00:54 pilot_heartbeat.json
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      5363 Mar 12 00:55 pilotlog.txt
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user    419189 Mar 12 00:55 log.48955010._000622.job.log.1
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       357 Mar 12 00:55 output.list
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       620 Mar 12 00:55 runtime_log
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user    747520 Mar 12 00:55 result.tar.gz
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user      9219 Mar 12 00:55 runtime_log.err
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user       643 Mar 12 00:55 8F2MDmISfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmOrELDmOzBImm.diag
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user     21975 Mar 12 00:55 stderr.txt
[2026-03-12 00:55:21] HITS file was successfully produced:
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user 187028716 Mar 12 00:53 shared/HITS.pool.root.1
[2026-03-12 00:55:21]  *** Contents of shared directory: ***
[2026-03-12 00:55:21] total 608620
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user 434830011 Mar 12 00:11 ATLAS.root_0
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user     15845 Mar 12 00:11 start_atlas.sh
[2026-03-12 00:55:21] -rw-r--r-- 2 mf493845 unix-user    597933 Mar 12 00:11 input.tar.gz
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user 187028716 Mar 12 00:53 HITS.pool.root.1
[2026-03-12 00:55:21] -rw------- 1 mf493845 unix-user    747520 Mar 12 00:55 result.tar.gz
00:55:22 (11405): run_atlas exited; CPU time 18813.840763
00:55:22 (11405): called boinc_finish(0)

</stderr_txt>
]]>

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