Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:34:30 (3332575): wrapper (7.7.26015): starting
00:34:30 (3332575): wrapper: running run_atlas (--nthreads 3)
[2026-03-13 00:34:30] Arguments: --nthreads 3
[2026-03-13 00:34:30] Threads: 3
[2026-03-13 00:34:30] Checking for CVMFS
[2026-03-13 00:34:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-13 00:34:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-13 00:34:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-13 00:34:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-13 00:34:31] 2.9.2.0 77542 22109 92900 157220 1 50 25276765 36864001 0 130560 0 8608688 99.982 841018 12714 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-13 00:34:31] CVMFS is ok
[2026-03-13 00:34:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 00:34:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 00:34:31] Further information can be found at the LHC@home message board.
[2026-03-13 00:34:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 00:34:31] Checking for apptainer binary...
[2026-03-13 00:34:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-13 00:34:31] Running /usr/bin/apptainer --version
[2026-03-13 00:34:31] apptainer version 1.4.1-1.1
[2026-03-13 00:34:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 00:34:31] thA312
[2026-03-13 00:34:31] apptainer works
[2026-03-13 00:34:31] Set ATHENA_PROC_NUMBER=3
[2026-03-13 00:34:31] Set ATHENA_CORE_NUMBER=3
[2026-03-13 00:34:31] Starting ATLAS job with PandaID=7038488598
[2026-03-13 00:34:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 01:52:05]  *** The last 200 lines of the pilot log: ***
[2026-03-13 01:52:05] 2026-03-13 00:51:34,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 01:52:05] 2026-03-13 00:51:34,676 | INFO     | did not find any defunct processes belonging to 3341039
[2026-03-13 01:52:05] 2026-03-13 00:51:34,677 | INFO     | did not find any defunct processes belonging to 3341039
[2026-03-13 01:52:05] 2026-03-13 00:51:34,677 | INFO     | ready for new job
[2026-03-13 01:52:05] 2026-03-13 00:51:34,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | **************************************
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | **************************************
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | 
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | architecture information:
[2026-03-13 01:52:05] 2026-03-13 00:51:34,678 | INFO     | executing command: cat /etc/os-release
[2026-03-13 01:52:05] 2026-03-13 00:51:34,687 | INFO     | cat /etc/os-release:
[2026-03-13 01:52:05] NAME="CentOS Linux"
[2026-03-13 01:52:05] VERSION="7 (Core)"
[2026-03-13 01:52:05] ID="centos"
[2026-03-13 01:52:05] ID_LIKE="rhel fedora"
[2026-03-13 01:52:05] VERSION_ID="7"
[2026-03-13 01:52:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 01:52:05] ANSI_COLOR="0;31"
[2026-03-13 01:52:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 01:52:05] HOME_URL="https://www.centos.org/"
[2026-03-13 01:52:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 01:52:05] 
[2026-03-13 01:52:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 01:52:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 01:52:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 01:52:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 01:52:05] 
[2026-03-13 01:52:05] 2026-03-13 00:51:34,687 | INFO     | **************************************
[2026-03-13 01:52:05] 2026-03-13 00:51:35,190 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-13 01:52:05] 2026-03-13 00:51:35,203 | INFO     | sufficient remaining disk space (331499962368 B)
[2026-03-13 01:52:05] 2026-03-13 00:51:35,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | INFO     | update_server=False
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 01:52:05] 2026-03-13 00:51:35,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 01:52:05] 2026-03-13 00:51:35,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 01:52:05] 2026-03-13 00:51:35,213 | INFO     | aborting loop
[2026-03-13 01:52:05] 2026-03-13 00:51:35,270 | INFO     | all job control threads have been joined
[2026-03-13 01:52:05] 2026-03-13 00:51:35,351 | INFO     | all data control threads have been joined
[2026-03-13 01:52:05] 2026-03-13 00:51:36,209 | INFO     | [job] retrieve thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,210 | INFO     | [job] queue monitor thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,218 | INFO     | [job] job monitor thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,268 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,275 | INFO     | [job] control thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,337 | INFO     | [data] copytool_in thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,356 | INFO     | [data] control thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,404 | INFO     | [payload] failed_post thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:36,472 | INFO     | all payload control threads have been joined
[2026-03-13 01:52:05] 2026-03-13 00:51:37,096 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:37,210 | INFO     | [data] copytool_out thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:37,423 | INFO     | [payload] validate_post thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:37,478 | INFO     | [payload] control thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:37,627 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:37,628 | INFO     | [job] validate thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:39,211 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:45,375 | INFO     | [monitor] cgroup control has ended
[2026-03-13 01:52:05] 2026-03-13 00:51:45,863 | INFO     | job.realtimelogging is not enabled
[2026-03-13 01:52:05] 2026-03-13 00:51:46,869 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 01:52:05] 2026-03-13 00:51:48,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675391346496)>', '<ExcThread(monitor, started 140675035145984)>']
[2026-03-13 01:52:05] 2026-03-13 00:51:53,547 | INFO     | all workflow threads have been joined
[2026-03-13 01:52:05] 2026-03-13 00:51:53,547 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 01:52:05] 2026-03-13 00:51:53,547 | INFO     | traces error code: 0
[2026-03-13 01:52:05] 2026-03-13 00:51:53,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 01:52:05] 2026-03-13 00:52:04,947 | INFO     | PID=3336613 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 01:52:05] 2026-03-13 00:52:04,948 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 01:52:05] 2026-03-13 00:52:04,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 01:52:05] 2026-03-13 00:52:04,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 01:52:05] 2026-03-13 00:52:04,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 01:52:05] 2026-03-13 00:52:04,948 | INFO     | [monitor] control thread has ended
[2026-03-13 01:52:05] 2026-03-13 00:52:04,994 [wrapper] ==== pilot stdout END ====
[2026-03-13 01:52:05] 2026-03-13 00:52:04,997 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 01:52:05] 2026-03-13 00:52:04,999 [wrapper] pilotpid: 3336613
[2026-03-13 01:52:05] 2026-03-13 00:52:05,001 [wrapper] Pilot exit status: 0
[2026-03-13 01:52:05] 2026-03-13 00:52:05,009 [wrapper] pandaids: 7038488598
[2026-03-13 01:52:05] 2026-03-13 00:52:05,024 [wrapper] cleanup supervisor_pilot 3346411 3336614
[2026-03-13 01:52:05] 2026-03-13 00:52:05,026 [wrapper] Test setup, not cleaning
[2026-03-13 01:52:05] 2026-03-13 00:52:05,029 [wrapper] apfmon messages muted
[2026-03-13 01:52:05] 2026-03-13 00:52:05,031 [wrapper] ==== wrapper stdout END ====
[2026-03-13 01:52:05] 2026-03-13 00:52:05,034 [wrapper] ==== wrapper stderr END ====
[2026-03-13 01:52:05]  *** Error codes and diagnostics ***
[2026-03-13 01:52:05]     "exeErrorCode": 0,
[2026-03-13 01:52:05]     "exeErrorDiag": "",
[2026-03-13 01:52:05]     "pilotErrorCode": 0,
[2026-03-13 01:52:05]     "pilotErrorDiag": "",
[2026-03-13 01:52:05]  *** Listing of results directory ***
[2026-03-13 01:52:05] total 610636
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:54 queuedata.json
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-13 01:52:05] -rwx------ 1 boinc boinc     36322 Mar  3 14:55 runpilot2-wrapper.sh
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc       100 Mar 13 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 01:52:05] -rwxr-xr-x 1 boinc boinc      7986 Mar 13 00:34 run_atlas
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc       105 Mar 13 00:34 job.xml
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc 436716146 Mar 13 00:34 EVNT.46701403._001001.pool.root.1
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc    597929 Mar 13 00:34 input.tar.gz
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc     15845 Mar 13 00:34 start_atlas.sh
[2026-03-13 01:52:05] drwxrwx--x 2 boinc boinc      4096 Mar 13 00:34 shared
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc         0 Mar 13 00:34 boinc_setup_complete
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      6438 Mar 13 00:34 init_data.xml
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc         0 Mar 13 00:34 boinc_lockfile
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      2558 Mar 13 00:34 pandaJob.out
[2026-03-13 01:52:05] -rw------- 1 boinc boinc   1006506 Mar 13 00:34 agis_schedconf.cvmfs.json
[2026-03-13 01:52:05] -rw------- 1 boinc boinc   1511578 Mar 13 00:34 agis_ddmendpoints.agis.ALL.json
[2026-03-13 01:52:05] -rw------- 1 boinc boinc       427 Mar 13 00:34 workernode_map.json
[2026-03-13 01:52:05] drwx------ 5 boinc boinc      4096 Mar 13 00:34 pilot3
[2026-03-13 01:52:05] -rw------- 1 boinc boinc 182803736 Mar 13 01:51 HITS.48955010._000009.pool.root.1
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc       530 Mar 13 01:51 boinc_task_state.xml
[2026-03-13 01:52:05] -rw------- 1 boinc boinc      1019 Mar 13 01:51 memory_monitor_summary.json
[2026-03-13 01:52:05] -rw------- 1 boinc boinc    243126 Mar 13 01:51 log.48955010._000009.job.log.tgz.1
[2026-03-13 01:52:05] -rw------- 1 boinc boinc      6325 Mar 13 01:51 heartbeat.json
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc        27 Mar 13 01:51 wrapper_checkpoint.txt
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      8192 Mar 13 01:51 boinc_mmap_file
[2026-03-13 01:52:05] -rw------- 1 boinc boinc       747 Mar 13 01:52 pilotlog.txt
[2026-03-13 01:52:05] -rw------- 1 boinc boinc        95 Mar 13 01:52 pilot_heartbeat.json
[2026-03-13 01:52:05] -rw------- 1 boinc boinc    680304 Mar 13 01:52 log.48955010._000009.job.log.1
[2026-03-13 01:52:05] -rw------- 1 boinc boinc       357 Mar 13 01:52 output.list
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc       620 Mar 13 01:52 runtime_log
[2026-03-13 01:52:05] -rw------- 1 boinc boinc    942080 Mar 13 01:52 result.tar.gz
[2026-03-13 01:52:05] -rw------- 1 boinc boinc       657 Mar 13 01:52 yeXLDmROfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmShELDmL256un.diag
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      8896 Mar 13 01:52 runtime_log.err
[2026-03-13 01:52:05] -rw-r--r-- 1 boinc boinc      9952 Mar 13 01:52 stderr.txt
[2026-03-13 01:52:05] HITS file was successfully produced:
[2026-03-13 01:52:05] -rw------- 1 boinc boinc 182803736 Mar 13 01:51 shared/HITS.pool.root.1
[2026-03-13 01:52:05]  *** Contents of shared directory: ***
[2026-03-13 01:52:05] total 606532
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc 436716146 Mar 13 00:34 ATLAS.root_0
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc    597929 Mar 13 00:34 input.tar.gz
[2026-03-13 01:52:05] -rw-r--r-- 2 boinc boinc     15845 Mar 13 00:34 start_atlas.sh
[2026-03-13 01:52:05] -rw------- 1 boinc boinc 182803736 Mar 13 01:51 HITS.pool.root.1
[2026-03-13 01:52:05] -rw------- 1 boinc boinc    942080 Mar 13 01:52 result.tar.gz
01:52:06 (3332575): run_atlas exited; CPU time 13154.120676
01:52:06 (3332575): called boinc_finish(0)

</stderr_txt>
]]>

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