Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:01:41 (9069): wrapper (7.7.26015): starting
06:01:41 (9069): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 06:01:41] Arguments: --nthreads 8
[2026-03-12 06:01:41] Threads: 8
[2026-03-12 06:01:41] Checking for CVMFS
[2026-03-12 06:01:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 06:01:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 06:01:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 06:01:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 06:01:44] 2.11.2.0 26122 124248 134348 157183 2 56 20302759 25165825 899 130560 155 42333647 99.822 33973542 1116 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 06:01:44] CVMFS is ok
[2026-03-12 06:01:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:01:44] Checking for apptainer binary...
[2026-03-12 06:01:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 06:01:44] Running /usr/bin/apptainer --version
[2026-03-12 06:01:44] apptainer version 1.3.2-1.el7
[2026-03-12 06:01:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:02:11] cg-vwn399.simple-grid.lan
[2026-03-12 06:02:11] apptainer works
[2026-03-12 06:02:11] Set ATHENA_PROC_NUMBER=8
[2026-03-12 06:02:11] Set ATHENA_CORE_NUMBER=8
[2026-03-12 06:02:11] Starting ATLAS job with PandaID=7049920069
[2026-03-12 06:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 11:10:49]  *** The last 200 lines of the pilot log: ***
[2026-03-12 11:10:49] 2026-03-12 10:09:34,511 | INFO     | job 7049920069 has finished - writing final server update
[2026-03-12 11:10:49] 2026-03-12 10:09:34,512 | INFO     | total number of processed events: 400 (read)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,514 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7049920069/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,515 | INFO     | extracted standard info from prmon json
[2026-03-12 11:10:49] 2026-03-12 10:09:34,515 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 11:10:49] 2026-03-12 10:09:34,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 11:10:49] 2026-03-12 10:09:34,515 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 11:10:49] 2026-03-12 10:09:34,515 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 11:10:49] 2026-03-12 10:09:34,522 | INFO     | fitting pss+swap vs Time
[2026-03-12 11:10:49] 2026-03-12 10:09:34,522 | INFO     | sum of square deviations: 7720081493.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,528 | INFO     | sum of deviations: 92677818499.99998
[2026-03-12 11:10:49] 2026-03-12 10:09:34,529 | INFO     | mean x: 1773301240.5
[2026-03-12 11:10:49] 2026-03-12 10:09:34,529 | INFO     | mean y: 2463598.8630136987
[2026-03-12 11:10:49] 2026-03-12 10:09:34,529 | INFO     | intersect: -21285613562.22659
[2026-03-12 11:10:49] 2026-03-12 10:09:34,529 | INFO     | chi2: 8.535877562708567
[2026-03-12 11:10:49] 2026-03-12 10:09:34,530 | INFO     | sum of square deviations: 7330250928.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,533 | INFO     | sum of deviations: 110514308170.00002
[2026-03-12 11:10:49] 2026-03-12 10:09:34,533 | INFO     | mean x: 1773301088.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,533 | INFO     | mean y: 2470471.0975609757
[2026-03-12 11:10:49] 2026-03-12 10:09:34,533 | INFO     | intersect: -26732650173.796726
[2026-03-12 11:10:49] 2026-03-12 10:09:34,534 | INFO     | chi2: 7.8329610750874465
[2026-03-12 11:10:49] 2026-03-12 10:09:34,534 | INFO     | current chi2=7.8329610750874465 (change=8.23484735409061 %)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,534 | INFO     | right removable region: 286
[2026-03-12 11:10:49] 2026-03-12 10:09:34,535 | INFO     | sum of square deviations: 7330250928.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,537 | INFO     | sum of deviations: -7540875570.999998
[2026-03-12 11:10:49] 2026-03-12 10:09:34,538 | INFO     | mean x: 1773301393.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,538 | INFO     | mean y: 2502782.393728223
[2026-03-12 11:10:49] 2026-03-12 10:09:34,538 | INFO     | intersect: 1826757543.36171
[2026-03-12 11:10:49] 2026-03-12 10:09:34,538 | INFO     | chi2: 3.7753151990602767
[2026-03-12 11:10:49] 2026-03-12 10:09:34,539 | INFO     | current chi2=3.7753151990602767 (change=55.771211907328365 %)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,539 | INFO     | sum of square deviations: 6953769450.5
[2026-03-12 11:10:49] 2026-03-12 10:09:34,542 | INFO     | sum of deviations: -83095137173.5
[2026-03-12 11:10:49] 2026-03-12 10:09:34,542 | INFO     | mean x: 1773301545.5
[2026-03-12 11:10:49] 2026-03-12 10:09:34,542 | INFO     | mean y: 2533338.7978723403
[2026-03-12 11:10:49] 2026-03-12 10:09:34,542 | INFO     | intersect: 21192872797.45031
[2026-03-12 11:10:49] 2026-03-12 10:09:34,543 | INFO     | chi2: 1.1571715116888464
[2026-03-12 11:10:49] 2026-03-12 10:09:34,543 | INFO     | current chi2=1.1571715116888464 (change=69.34900927009005 %)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,543 | INFO     | sum of square deviations: 6590404498.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,546 | INFO     | sum of deviations: -92610011753.99998
[2026-03-12 11:10:49] 2026-03-12 10:09:34,546 | INFO     | mean x: 1773301698.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,546 | INFO     | mean y: 2537289.974729242
[2026-03-12 11:10:49] 2026-03-12 10:09:34,547 | INFO     | intersect: 24921416115.24348
[2026-03-12 11:10:49] 2026-03-12 10:09:34,547 | INFO     | chi2: 1.0427890633737336
[2026-03-12 11:10:49] 2026-03-12 10:09:34,547 | INFO     | current chi2=1.0427890633737336 (change=9.884658165164826 %)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,547 | INFO     | left removable region: 30
[2026-03-12 11:10:49] 2026-03-12 10:09:34,548 | INFO     | sum of square deviations: 5202255680.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,554 | INFO     | sum of deviations: -49182257293.0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,554 | INFO     | mean x: 1773301972.5
[2026-03-12 11:10:49] 2026-03-12 10:09:34,555 | INFO     | mean y: 2535061.1171875
[2026-03-12 11:10:49] 2026-03-12 10:09:34,555 | INFO     | intersect: 16767376936.339941
[2026-03-12 11:10:49] 2026-03-12 10:09:34,555 | INFO     | chi2: 0.22937910843385698
[2026-03-12 11:10:49] 2026-03-12 10:09:34,555 | INFO     | current memory leak: -9.45 B/s (using 256 data points, chi2=0.23)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,556 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,556 | INFO     | ..............................
[2026-03-12 11:10:49] 2026-03-12 10:09:34,556 | INFO     | . Timing measurements:
[2026-03-12 11:10:49] 2026-03-12 10:09:34,556 | INFO     | . get job = 0 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,556 | INFO     | . initial setup = 112 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | . payload setup = 157 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | . stage-in = 0 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | . payload execution = 17906 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | . stage-out = 13 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | . log creation = 1 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,557 | INFO     | ..............................
[2026-03-12 11:10:49] 2026-03-12 10:09:34,624 | INFO     | time since job start (18088s) is within the limit (345600.0s)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,713 | INFO     | 
[2026-03-12 11:10:49] 2026-03-12 10:09:34,713 | INFO     | job summary report
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | --------------------------------------------------
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | PanDA job id: 7049920069
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | task id: 48967011
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | errors: (none)
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | pilot state: finished 
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | transexitcode: 0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | exeerrorcode: 0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,714 | INFO     | exeerrordiag: 
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | exitcode: 0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | exitmsg: OK
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | cpuconsumptiontime: 67827 s
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | nevents: 400
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | neventsw: 0
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | pid: 17505
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | pgrp: 17505
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | corecount: 8
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | event service: False
[2026-03-12 11:10:49] 2026-03-12 10:09:34,715 | INFO     | sizes: {0: 2279809, 1: 2280270, 2: 2280270, 18068: 2312560, 18069: 2312559, 18082: 2321613, 18085: 2321797, 18086: 2321991}
[2026-03-12 11:10:49] 2026-03-12 10:09:34,716 | INFO     | --------------------------------------------------
[2026-03-12 11:10:49] 2026-03-12 10:09:34,716 | INFO     | 
[2026-03-12 11:10:49] 2026-03-12 10:09:34,716 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | job 7049920069 has completed (purged errors)
[2026-03-12 11:10:49] 2026-03-12 10:09:35,314 | INFO     | overall cleanup function is called
[2026-03-12 11:10:49] 2026-03-12 10:09:36,326 | INFO     | --- collectZombieJob: --- 10, [17505]
[2026-03-12 11:10:49] 2026-03-12 10:09:36,326 | INFO     | zombie collector waiting for pid 17505
[2026-03-12 11:10:49] 2026-03-12 10:09:36,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 11:10:49] 2026-03-12 10:09:36,327 | INFO     | collected zombie processes
[2026-03-12 11:10:49] 2026-03-12 10:09:36,327 | INFO     | will attempt to kill all subprocesses of pid=17505
[2026-03-12 11:10:49] 2026-03-12 10:09:36,413 | INFO     | process IDs to be killed: [17505] (in reverse order)
[2026-03-12 11:10:49] 2026-03-12 10:09:37,456 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 11:10:49] 2026-03-12 10:09:37,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 11:10:49] 2026-03-12 10:09:37,458 | INFO     | did not find any defunct processes belonging to 17505
[2026-03-12 11:10:49] 2026-03-12 10:09:37,460 | INFO     | did not find any defunct processes belonging to 17505
[2026-03-12 11:10:49] 2026-03-12 10:09:37,460 | INFO     | ready for new job
[2026-03-12 11:10:49] 2026-03-12 10:09:37,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 11:10:49] 2026-03-12 10:09:37,462 | INFO     | **************************************
[2026-03-12 11:10:49] 2026-03-12 10:09:37,463 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 11:10:49] 2026-03-12 10:09:37,463 | INFO     | **************************************
[2026-03-12 11:10:49] 2026-03-12 10:09:37,463 | INFO     | 
[2026-03-12 11:10:49] 2026-03-12 10:09:37,463 | INFO     | pilot is running in a VM
[2026-03-12 11:10:49] 2026-03-12 10:09:37,463 | INFO     | architecture information:
[2026-03-12 11:10:49] 2026-03-12 10:09:37,470 | INFO     | executing command: cat /etc/os-release
[2026-03-12 11:10:49] 2026-03-12 10:09:37,767 | INFO     | cat /etc/os-release:
[2026-03-12 11:10:49] NAME="CentOS Linux"
[2026-03-12 11:10:49] VERSION="7 (Core)"
[2026-03-12 11:10:49] ID="centos"
[2026-03-12 11:10:49] ID_LIKE="rhel fedora"
[2026-03-12 11:10:49] VERSION_ID="7"
[2026-03-12 11:10:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 11:10:49] ANSI_COLOR="0;31"
[2026-03-12 11:10:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 11:10:49] HOME_URL="https://www.centos.org/"
[2026-03-12 11:10:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 11:10:49] 
[2026-03-12 11:10:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 11:10:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 11:10:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 11:10:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 11:10:49] 
[2026-03-12 11:10:49] 2026-03-12 10:09:37,767 | INFO     | **************************************
[2026-03-12 11:10:49] 2026-03-12 10:09:38,270 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-12 11:10:49] 2026-03-12 10:09:38,630 | INFO     | sufficient remaining disk space (496836280320 B)
[2026-03-12 11:10:49] 2026-03-12 10:09:38,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 11:10:49] 2026-03-12 10:09:38,630 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 11:10:49] 2026-03-12 10:09:38,630 | INFO     | update_server=False
[2026-03-12 11:10:49] 2026-03-12 10:09:38,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 11:10:49] 2026-03-12 10:09:38,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 11:10:49] 2026-03-12 10:09:38,631 | INFO     | aborting loop
[2026-03-12 11:10:49] 2026-03-12 10:09:38,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 11:10:49] 2026-03-12 10:09:38,955 | INFO     | all payload control threads have been joined
[2026-03-12 11:10:49] 2026-03-12 10:09:39,636 | INFO     | [job] retrieve thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,637 | INFO     | [job] job monitor thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,654 | INFO     | [job] validate thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 11:10:49] 2026-03-12 10:09:39,732 | INFO     | all data control threads have been joined
[2026-03-12 11:10:49] 2026-03-12 10:09:39,749 | INFO     | [data] copytool_in thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,807 | INFO     | [payload] failed_post thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 11:10:49] 2026-03-12 10:09:39,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:39,961 | INFO     | [payload] control thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,008 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,012 | INFO     | all job control threads have been joined
[2026-03-12 11:10:49] 2026-03-12 10:09:40,575 | INFO     | [payload] validate_post thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,638 | INFO     | [data] copytool_out thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,698 | INFO     | [job] queue monitor thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,738 | INFO     | [data] control thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:40,813 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:41,018 | INFO     | [job] control thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:41,085 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:09:43,893 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 11:10:49] 2026-03-12 10:10:07,774 | INFO     | PID=13053 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 11:10:49] 2026-03-12 10:10:07,774 | INFO     | .. there are 2 such processes running
[2026-03-12 11:10:49] 2026-03-12 10:10:07,774 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 11:10:49] 2026-03-12 10:10:07,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 11:10:49] 2026-03-12 10:10:07,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 11:10:49] 2026-03-12 10:10:37,199 | INFO     | [monitor] cgroup control has ended
[2026-03-12 11:10:49] 2026-03-12 10:10:38,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966425855808)>', '<ExcThread(monitor, started 139965837063936)>']
[2026-03-12 11:10:49] 2026-03-12 10:10:38,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 11:10:49] 2026-03-12 10:10:38,960 | INFO     | [monitor] control thread has ended
[2026-03-12 11:10:49] 2026-03-12 10:10:43,061 | INFO     | all workflow threads have been joined
[2026-03-12 11:10:49] 2026-03-12 10:10:43,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 11:10:49] 2026-03-12 10:10:43,062 | INFO     | traces error code: 0
[2026-03-12 11:10:49] 2026-03-12 10:10:43,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 11:10:49] 2026-03-12 10:10:43,649 [wrapper] ==== pilot stdout END ====
[2026-03-12 11:10:49] 2026-03-12 10:10:43,710 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 11:10:49] 2026-03-12 10:10:43,771 [wrapper] pilotpid: 13053
[2026-03-12 11:10:49] 2026-03-12 10:10:43,922 [wrapper] Pilot exit status: 0
[2026-03-12 11:10:49] 2026-03-12 10:10:44,446 [wrapper] pandaids: 7049920069
[2026-03-12 11:10:49] 2026-03-12 10:10:45,622 [wrapper] cleanup supervisor_pilot 24008 13054
[2026-03-12 11:10:49] 2026-03-12 10:10:45,687 [wrapper] Test setup, not cleaning
[2026-03-12 11:10:49] 2026-03-12 10:10:45,822 [wrapper] apfmon messages muted
[2026-03-12 11:10:49] 2026-03-12 10:10:45,923 [wrapper] ==== wrapper stdout END ====
[2026-03-12 11:10:49] 2026-03-12 10:10:45,972 [wrapper] ==== wrapper stderr END ====
[2026-03-12 11:10:49]  *** Error codes and diagnostics ***
[2026-03-12 11:10:49]     "exeErrorCode": 0,
[2026-03-12 11:10:49]     "exeErrorDiag": "",
[2026-03-12 11:10:49]     "pilotErrorCode": 0,
[2026-03-12 11:10:49]     "pilotErrorDiag": "",
[2026-03-12 11:10:49]  *** Listing of results directory ***
[2026-03-12 11:10:49] total 425552
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc    585013 Mar 11 15:39 pilot3.tar.gz
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc      5111 Mar 11 15:40 queuedata.json
[2026-03-12 11:10:49] -rwx------. 1 boinc boinc     36322 Mar 11 15:40 runpilot2-wrapper.sh
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc       100 Mar 12 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 11:10:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 06:01 run_atlas
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc       105 Mar 12 06:01 job.xml
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc 218411649 Mar 12 06:01 EVNT.48967008._000518.pool.root.1
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc    597522 Mar 12 06:01 input.tar.gz
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc      6392 Mar 12 06:01 init_data.xml
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc     15845 Mar 12 06:01 start_atlas.sh
[2026-03-12 11:10:49] drwxrwx--x. 2 boinc boinc        68 Mar 12 06:01 shared
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc         0 Mar 12 06:01 boinc_lockfile
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc      2563 Mar 12 06:02 pandaJob.out
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc       415 Mar 12 06:08 workernode_map.json
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc   1006235 Mar 12 06:08 agis_schedconf.cvmfs.json
[2026-03-12 11:10:49] drwx------. 5 boinc boinc      4096 Mar 12 06:08 pilot3
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc 207301606 Mar 12 11:07 HITS.48967011._013106.pool.root.1
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc       531 Mar 12 11:08 boinc_task_state.xml
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc      1013 Mar 12 11:09 memory_monitor_summary.json
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc        95 Mar 12 11:09 pilot_heartbeat.json
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc   1511578 Mar 12 11:09 agis_ddmendpoints.agis.ALL.json
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc    529680 Mar 12 11:09 log.48967011._013106.job.log.tgz.1
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc      6324 Mar 12 11:09 heartbeat.json
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc      8192 Mar 12 11:10 boinc_mmap_file
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc        28 Mar 12 11:10 wrapper_checkpoint.txt
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc      4880 Mar 12 11:10 pilotlog.txt
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc   2533103 Mar 12 11:10 log.48967011._013106.job.log.1
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc       357 Mar 12 11:10 output.list
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc       620 Mar 12 11:10 runtime_log
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc   3082240 Mar 12 11:10 result.tar.gz
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc      8816 Mar 12 11:10 runtime_log.err
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc       656 Mar 12 11:10 oncNDmwuZK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml0jLDmbRvxvm.diag
[2026-03-12 11:10:49] -rw-r--r--. 1 boinc boinc     20733 Mar 12 11:10 stderr.txt
[2026-03-12 11:10:49] HITS file was successfully produced:
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc 207301606 Mar 12 11:07 shared/HITS.pool.root.1
[2026-03-12 11:10:49]  *** Contents of shared directory: ***
[2026-03-12 11:10:49] total 419352
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc 218411649 Mar 12 06:01 ATLAS.root_0
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc    597522 Mar 12 06:01 input.tar.gz
[2026-03-12 11:10:49] -rw-r--r--. 2 boinc boinc     15845 Mar 12 06:01 start_atlas.sh
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc 207301606 Mar 12 11:07 HITS.pool.root.1
[2026-03-12 11:10:49] -rw-------. 1 boinc boinc   3082240 Mar 12 11:10 result.tar.gz
11:10:50 (9069): run_atlas exited; CPU time 68019.571100
11:10:50 (9069): called boinc_finish(0)

</stderr_txt>
]]>

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