Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:07:46 (3624972): wrapper (7.7.26015): starting
10:07:46 (3624972): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 10:07:46] Arguments: --nthreads 4
[2026-03-13 10:07:46] Threads: 4
[2026-03-13 10:07:46] Checking for CVMFS
[2026-03-13 10:07:46] No cvmfs_config command found, will try listing directly
[2026-03-13 10:07:46] CVMFS is ok
[2026-03-13 10:07:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 10:07:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 10:07:46] Further information can be found at the LHC@home message board.
[2026-03-13 10:07:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 10:07:46] Checking for apptainer binary...
[2026-03-13 10:07:46] which: no apptainer in ((null))
[2026-03-13 10:07:46] apptainer is not installed, using version from CVMFS
[2026-03-13 10:07:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 10:07:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-13 10:07:47] apptainer works
[2026-03-13 10:07:47] Set ATHENA_PROC_NUMBER=4
[2026-03-13 10:07:47] Set ATHENA_CORE_NUMBER=4
[2026-03-13 10:07:47] Starting ATLAS job with PandaID=7049917299
[2026-03-13 10:07:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 14:17:40]  *** The last 200 lines of the pilot log: ***
[2026-03-13 14:17:40] 2026-03-13 13:16:47,099 | INFO     | job 7049917299 has finished - writing final server update
[2026-03-13 14:17:40] 2026-03-13 13:16:47,099 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_705621/.job.ad'
[2026-03-13 14:17:40] 2026-03-13 13:16:47,099 | INFO     | total number of processed events: 400 (read)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,112 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049917299/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,113 | INFO     | extracted standard info from prmon json
[2026-03-13 14:17:40] 2026-03-13 13:16:47,113 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 14:17:40] 2026-03-13 13:16:47,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 14:17:40] 2026-03-13 13:16:47,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 14:17:40] 2026-03-13 13:16:47,114 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 14:17:40] 2026-03-13 13:16:47,119 | INFO     | fitting pss+swap vs Time
[2026-03-13 14:17:40] 2026-03-13 13:16:47,119 | INFO     | sum of square deviations: 4560048290.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,121 | INFO     | sum of deviations: 18891045957.999996
[2026-03-13 14:17:40] 2026-03-13 13:16:47,121 | INFO     | mean x: 1773400350.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,121 | INFO     | mean y: 2305574.0653061224
[2026-03-13 14:17:40] 2026-03-13 13:16:47,121 | INFO     | intersect: -7344412132.247247
[2026-03-13 14:17:40] 2026-03-13 13:16:47,122 | INFO     | chi2: 2.0803680457935143
[2026-03-13 14:17:40] 2026-03-13 13:16:47,122 | INFO     | sum of square deviations: 4286517580.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,124 | INFO     | sum of deviations: 33318169744.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,124 | INFO     | mean x: 1773400197.5
[2026-03-13 14:17:40] 2026-03-13 13:16:47,124 | INFO     | mean y: 2313479.05
[2026-03-13 14:17:40] 2026-03-13 13:16:47,124 | INFO     | intersect: -13781940918.98005
[2026-03-13 14:17:40] 2026-03-13 13:16:47,125 | INFO     | chi2: 1.3166582779381342
[2026-03-13 14:17:40] 2026-03-13 13:16:47,125 | INFO     | current chi2=1.3166582779381342 (change=36.710320051281045 %)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,125 | INFO     | sum of square deviations: 4024149870.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,127 | INFO     | sum of deviations: 32571093228.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,127 | INFO     | mean x: 1773400045.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,127 | INFO     | mean y: 2313044.744680851
[2026-03-13 14:17:40] 2026-03-13 13:16:47,127 | INFO     | intersect: -14351421299.705664
[2026-03-13 14:17:40] 2026-03-13 13:16:47,128 | INFO     | chi2: 1.3170754402749636
[2026-03-13 14:17:40] 2026-03-13 13:16:47,128 | INFO     | current chi2=1.3170754402749636 (change=-0.03168341731635134 %)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,128 | INFO     | right removable region: 234
[2026-03-13 14:17:40] 2026-03-13 13:16:47,128 | INFO     | sum of square deviations: 4286517580.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,130 | INFO     | sum of deviations: -11106069035.5
[2026-03-13 14:17:40] 2026-03-13 13:16:47,130 | INFO     | mean x: 1773400502.5
[2026-03-13 14:17:40] 2026-03-13 13:16:47,130 | INFO     | mean y: 2322109.2958333334
[2026-03-13 14:17:40] 2026-03-13 13:16:47,130 | INFO     | intersect: 4597079518.0256
[2026-03-13 14:17:40] 2026-03-13 13:16:47,131 | INFO     | chi2: 0.7928858456155
[2026-03-13 14:17:40] 2026-03-13 13:16:47,131 | INFO     | current chi2=0.7928858456155 (change=61.8872320588317 %)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,131 | INFO     | sum of square deviations: 4024149870.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,133 | INFO     | sum of deviations: -8098493773.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,133 | INFO     | mean x: 1773400655.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,133 | INFO     | mean y: 2320363.8085106383
[2026-03-13 14:17:40] 2026-03-13 13:16:47,133 | INFO     | intersect: 3571241657.8734417
[2026-03-13 14:17:40] 2026-03-13 13:16:47,134 | INFO     | chi2: 0.7811426774839483
[2026-03-13 14:17:40] 2026-03-13 13:16:47,134 | INFO     | current chi2=0.7811426774839483 (change=1.4810666877822463 %)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,134 | INFO     | left removable region: 20
[2026-03-13 14:17:40] 2026-03-13 13:16:47,134 | INFO     | sum of square deviations: 3038856977.5
[2026-03-13 14:17:40] 2026-03-13 13:16:47,136 | INFO     | sum of deviations: 3951706148.0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,136 | INFO     | mean x: 1773400624.5
[2026-03-13 14:17:40] 2026-03-13 13:16:47,136 | INFO     | mean y: 2330239.7196261683
[2026-03-13 14:17:40] 2026-03-13 13:16:47,136 | INFO     | intersect: -2303786238.4796805
[2026-03-13 14:17:40] 2026-03-13 13:16:47,136 | INFO     | chi2: 0.0006185144314025719
[2026-03-13 14:17:40] 2026-03-13 13:16:47,137 | INFO     | current memory leak: 1.30 B/s (using 214 data points, chi2=0.00)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,137 | INFO     | could have reported an average CPU frequency of 2500 MHz (12 samples)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,137 | INFO     | ..............................
[2026-03-13 14:17:40] 2026-03-13 13:16:47,137 | INFO     | . Timing measurements:
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . get job = 0 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . initial setup = 8 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . payload setup = 9 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . stage-in = 0 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . payload execution = 14899 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . stage-out = 1 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | . log creation = 0 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,138 | INFO     | ..............................
[2026-03-13 14:17:40] 2026-03-13 13:16:47,237 | INFO     | 
[2026-03-13 14:17:40] 2026-03-13 13:16:47,237 | INFO     | job summary report
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | --------------------------------------------------
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | PanDA job id: 7049917299
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | task id: 48967094
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | errors: (none)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | pilot state: finished 
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | transexitcode: 0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | exeerrorcode: 0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | exeerrordiag: 
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | exitcode: 0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | exitmsg: OK
[2026-03-13 14:17:40] 2026-03-13 13:16:47,238 | INFO     | cpuconsumptiontime: 55748 s
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | nevents: 400
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | neventsw: 0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | pid: 3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | pgrp: 3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | corecount: 4
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | event service: False
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | sizes: {0: 2279800, 1: 2280261, 2: 2280261, 14911: 2311430, 14912: 2311429, 14914: 2320505, 14916: 2320883}
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | --------------------------------------------------
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | 
[2026-03-13 14:17:40] 2026-03-13 13:16:47,239 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-13 14:17:40] 2026-03-13 13:16:47,264 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,267 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 14:17:40] 2026-03-13 13:16:47,267 | INFO     | job 7049917299 has completed (purged errors)
[2026-03-13 14:17:40] 2026-03-13 13:16:47,267 | INFO     | overall cleanup function is called
[2026-03-13 14:17:40] 2026-03-13 13:16:48,275 | INFO     | --- collectZombieJob: --- 10, [3633599]
[2026-03-13 14:17:40] 2026-03-13 13:16:48,275 | INFO     | zombie collector waiting for pid 3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:48,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 14:17:40] 2026-03-13 13:16:48,275 | INFO     | collected zombie processes
[2026-03-13 14:17:40] 2026-03-13 13:16:48,275 | INFO     | will attempt to kill all subprocesses of pid=3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:48,699 | INFO     | process IDs to be killed: [3633599] (in reverse order)
[2026-03-13 14:17:40] 2026-03-13 13:16:48,835 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 14:17:40] 2026-03-13 13:16:48,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 14:17:40] 2026-03-13 13:16:48,848 | INFO     | did not find any defunct processes belonging to 3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:48,862 | INFO     | did not find any defunct processes belonging to 3633599
[2026-03-13 14:17:40] 2026-03-13 13:16:48,862 | INFO     | ready for new job
[2026-03-13 14:17:40] 2026-03-13 13:16:48,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 14:17:40] 2026-03-13 13:16:48,865 | INFO     | **************************************
[2026-03-13 14:17:40] 2026-03-13 13:16:48,865 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 14:17:40] 2026-03-13 13:16:48,865 | INFO     | **************************************
[2026-03-13 14:17:40] 2026-03-13 13:16:48,865 | INFO     | 
[2026-03-13 14:17:40] 2026-03-13 13:16:48,869 | INFO     | architecture information:
[2026-03-13 14:17:40] 2026-03-13 13:16:48,870 | INFO     | executing command: cat /etc/os-release
[2026-03-13 14:17:40] 2026-03-13 13:16:48,887 | INFO     | cat /etc/os-release:
[2026-03-13 14:17:40] NAME="CentOS Linux"
[2026-03-13 14:17:40] VERSION="7 (Core)"
[2026-03-13 14:17:40] ID="centos"
[2026-03-13 14:17:40] ID_LIKE="rhel fedora"
[2026-03-13 14:17:40] VERSION_ID="7"
[2026-03-13 14:17:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 14:17:40] ANSI_COLOR="0;31"
[2026-03-13 14:17:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 14:17:40] HOME_URL="https://www.centos.org/"
[2026-03-13 14:17:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 14:17:40] 
[2026-03-13 14:17:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 14:17:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 14:17:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 14:17:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 14:17:40] 
[2026-03-13 14:17:40] 2026-03-13 13:16:48,887 | INFO     | **************************************
[2026-03-13 14:17:40] 2026-03-13 13:16:49,389 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-13 14:17:40] 2026-03-13 13:16:49,408 | INFO     | sufficient remaining disk space (21201158144 B)
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | INFO     | update_server=False
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:17:40] 2026-03-13 13:16:49,409 | INFO     | aborting loop
[2026-03-13 14:17:40] 2026-03-13 13:16:49,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 14:17:40] 2026-03-13 13:16:49,481 | INFO     | all payload control threads have been joined
[2026-03-13 14:17:40] 2026-03-13 13:16:49,509 | INFO     | all job control threads have been joined
[2026-03-13 14:17:40] 2026-03-13 13:16:49,579 | INFO     | all data control threads have been joined
[2026-03-13 14:17:40] 2026-03-13 13:16:50,413 | INFO     | [job] retrieve thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,414 | INFO     | [job] job monitor thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,486 | INFO     | [payload] control thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,514 | INFO     | [job] control thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 14:17:40] 2026-03-13 13:16:50,583 | INFO     | [data] control thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,805 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:50,963 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:51,082 | INFO     | [payload] failed_post thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:51,752 | INFO     | [job] validate thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:51,877 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:51,891 | INFO     | [data] copytool_in thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:51,967 | INFO     | [payload] validate_post thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:52,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 14:17:40] 2026-03-13 13:16:52,527 | INFO     | [data] copytool_out thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:53,253 | INFO     | [job] queue monitor thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:16:53,418 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:17:00,281 | INFO     | job.realtimelogging is not enabled
[2026-03-13 14:17:40] 2026-03-13 13:17:01,286 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 14:17:40] 2026-03-13 13:17:18,845 | INFO     | PID=3628766 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 14:17:40] 2026-03-13 13:17:18,846 | INFO     | .. there are 12 such processes running
[2026-03-13 14:17:40] 2026-03-13 13:17:18,846 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 14:17:40] 2026-03-13 13:17:18,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 14:17:40] 2026-03-13 13:17:18,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 14:17:40] 2026-03-13 13:17:33,820 | INFO     | [monitor] cgroup control has ended
[2026-03-13 14:17:40] 2026-03-13 13:17:35,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22421319833408)>', '<ExcThread(monitor, started 22421000148736)>']
[2026-03-13 14:17:40] 2026-03-13 13:17:35,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 14:17:40] 2026-03-13 13:17:35,937 | INFO     | [monitor] control thread has ended
[2026-03-13 14:17:40] 2026-03-13 13:17:40,457 | INFO     | all workflow threads have been joined
[2026-03-13 14:17:40] 2026-03-13 13:17:40,457 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 14:17:40] 2026-03-13 13:17:40,457 | INFO     | traces error code: 0
[2026-03-13 14:17:40] 2026-03-13 13:17:40,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 14:17:40] 2026-03-13 13:17:40,619 [wrapper] ==== pilot stdout END ====
[2026-03-13 14:17:40] 2026-03-13 13:17:40,622 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 14:17:40] 2026-03-13 13:17:40,625 [wrapper] pilotpid: 3628766
[2026-03-13 14:17:40] 2026-03-13 13:17:40,627 [wrapper] Pilot exit status: 0
[2026-03-13 14:17:40] 2026-03-13 13:17:40,637 [wrapper] pandaids: 7049917299
[2026-03-13 14:17:40] 2026-03-13 13:17:40,722 [wrapper] cleanup supervisor_pilot 3899716 3628767
[2026-03-13 14:17:40] 2026-03-13 13:17:40,725 [wrapper] Test setup, not cleaning
[2026-03-13 14:17:40] 2026-03-13 13:17:40,728 [wrapper] apfmon messages muted
[2026-03-13 14:17:40] 2026-03-13 13:17:40,730 [wrapper] ==== wrapper stdout END ====
[2026-03-13 14:17:40] 2026-03-13 13:17:40,733 [wrapper] ==== wrapper stderr END ====
[2026-03-13 14:17:40]  *** Error codes and diagnostics ***
[2026-03-13 14:17:40]     "exeErrorCode": 0,
[2026-03-13 14:17:40]     "exeErrorDiag": "",
[2026-03-13 14:17:40]     "pilotErrorCode": 0,
[2026-03-13 14:17:40]     "pilotErrorDiag": "",
[2026-03-13 14:17:40]  *** Listing of results directory ***
[2026-03-13 14:17:40] total 421532
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc    585013 Mar 11 15:39 pilot3.tar.gz
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc      5111 Mar 11 15:42 queuedata.json
[2026-03-13 14:17:40] -rwx------. 1 boinc boinc     36322 Mar 11 15:42 runpilot2-wrapper.sh
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc       100 Mar 13 10:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 14:17:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 10:07 run_atlas
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc       105 Mar 13 10:07 job.xml
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc      6563 Mar 13 10:07 init_data.xml
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc 217828234 Mar 13 10:07 EVNT.48967092._000130.pool.root.1
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc     15845 Mar 13 10:07 start_atlas.sh
[2026-03-13 14:17:40] drwxrwx--x. 2 boinc boinc      4096 Mar 13 10:07 shared
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc    597529 Mar 13 10:07 input.tar.gz
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc         0 Mar 13 10:07 boinc_lockfile
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc      2596 Mar 13 10:07 pandaJob.out
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc   1006487 Mar 13 10:08 agis_schedconf.cvmfs.json
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc       452 Mar 13 10:08 workernode_map.json
[2026-03-13 14:17:40] drwx------. 5 boinc boinc      4096 Mar 13 10:08 pilot3
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc 204865254 Mar 13 14:16 HITS.48967094._001989.pool.root.1
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc       529 Mar 13 14:16 boinc_task_state.xml
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc        95 Mar 13 14:16 pilot_heartbeat.json
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc      1035 Mar 13 14:16 memory_monitor_summary.json
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc   1511578 Mar 13 14:16 agis_ddmendpoints.agis.ALL.json
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc    414398 Mar 13 14:16 log.48967094._001989.job.log.tgz.1
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc      6405 Mar 13 14:16 heartbeat.json
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc        27 Mar 13 14:17 wrapper_checkpoint.txt
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc      8192 Mar 13 14:17 boinc_mmap_file
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc      4901 Mar 13 14:17 pilotlog.txt
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc   2092143 Mar 13 14:17 log.48967094._001989.job.log.1
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc       357 Mar 13 14:17 output.list
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc       620 Mar 13 14:17 runtime_log
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc   2529280 Mar 13 14:17 result.tar.gz
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc       665 Mar 13 14:17 U0AODmqwZK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmu3jLDmfbmHJn.diag
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc      9205 Mar 13 14:17 runtime_log.err
[2026-03-13 14:17:40] -rw-r--r--. 1 boinc boinc     20869 Mar 13 14:17 stderr.txt
[2026-03-13 14:17:40] HITS file was successfully produced:
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc 204865254 Mar 13 14:16 shared/HITS.pool.root.1
[2026-03-13 14:17:40]  *** Contents of shared directory: ***
[2026-03-13 14:17:40] total 415868
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc 217828234 Mar 13 10:07 ATLAS.root_0
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc     15845 Mar 13 10:07 start_atlas.sh
[2026-03-13 14:17:40] -rw-r--r--. 2 boinc boinc    597529 Mar 13 10:07 input.tar.gz
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc 204865254 Mar 13 14:16 HITS.pool.root.1
[2026-03-13 14:17:40] -rw-------. 1 boinc boinc   2529280 Mar 13 14:17 result.tar.gz
14:17:42 (3624972): run_atlas exited; CPU time 56425.291159
14:17:42 (3624972): called boinc_finish(0)

</stderr_txt>
]]>

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