Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
13:32:26 (3808070): wrapper (7.7.26015): starting
13:32:26 (3808070): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 13:32:26] Arguments: --nthreads 4
[2026-03-11 13:32:26] Threads: 4
[2026-03-11 13:32:26] Checking for CVMFS
[2026-03-11 13:32:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 13:32:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 13:32:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 13:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 13:32:26] 2.13.3.0 3551250 196 51124 157169 3 188 3720762 6144000 4710 130560 0 625232 99.996 11065 1570 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 13:32:26] CVMFS is ok
[2026-03-11 13:32:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 13:32:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 13:32:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 13:32:26] Further information can be found at the LHC@home message board.
[2026-03-11 13:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 13:32:26] Checking for apptainer binary...
[2026-03-11 13:32:26] apptainer is not installed, using version from CVMFS
[2026-03-11 13:32:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 13:32:26] desktop-b650ef
[2026-03-11 13:32:26] apptainer works
[2026-03-11 13:32:26] Set ATHENA_PROC_NUMBER=4
[2026-03-11 13:32:26] Set ATHENA_CORE_NUMBER=4
[2026-03-11 13:32:26] Starting ATLAS job with PandaID=7036325137
[2026-03-11 13:32:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 15:03:55]  *** The last 200 lines of the pilot log: ***
[2026-03-11 15:03:55]  filetype=log
[2026-03-11 15:03:55]  guid=917bb273-1b10-49c3-b71e-42bb49309b9e
[2026-03-11 15:03:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 15:03:55]  is_altstaged=None
[2026-03-11 15:03:55]  is_tar=False
[2026-03-11 15:03:55]  lfn=log.48838462._005665.job.log.tgz.1
[2026-03-11 15:03:55]  mtime=0
[2026-03-11 15:03:55]  protocol_id=None
[2026-03-11 15:03:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 15:03:55]  replicas=None
[2026-03-11 15:03:55]  scope=mc23_13p6TeV
[2026-03-11 15:03:55]  status=None
[2026-03-11 15:03:55]  status_code=0
[2026-03-11 15:03:55]  storage_token=
[2026-03-11 15:03:55]  surl=/var/lib/boinc-client/slots/25/PanDA_Pilot-7036325137/log.48838462._005665.job.log.tgz.1
[2026-03-11 15:03:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/f0/log.48838462._005665.job.log.tgz.1
[2026-03-11 15:03:55]  workdir=None
[2026-03-11 15:03:55] ]
[2026-03-11 15:03:55] 2026-03-11 22:03:21,267 | INFO     | transferring file log.48838462._005665.job.log.tgz.1 from /var/lib/boinc-client/slots/25/PanDA_Pilot-7036325137/log.48838462._005665.job.log.tgz.1 to /var/lib/boin
[2026-03-11 15:03:55] 2026-03-11 22:03:21,267 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/25/PanDA_Pilot-7036325137/log.48838462._005665.job.log.tgz.1 /var/lib/boinc-client/slots/25/log.4883
[2026-03-11 15:03:55] 2026-03-11 22:03:21,276 | INFO     | adding to output.list: log.48838462._005665.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/f0/log.48838462._005665.job.log.tg
[2026-03-11 15:03:55] 2026-03-11 22:03:21,277 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 15:03:55] 2026-03-11 22:03:21,277 | INFO     | summary of transferred files:
[2026-03-11 15:03:55] 2026-03-11 22:03:21,277 | INFO     |  -- lfn=log.48838462._005665.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 15:03:55] 2026-03-11 22:03:21,277 | INFO     | stage-out finished correctly
[2026-03-11 15:03:55] 2026-03-11 22:03:21,949 | INFO     | time since job start (5444s) is within the limit (349056.0s)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,245 | INFO     | monitor loop #412: job 0:7036325137 is in state 'finished'
[2026-03-11 15:03:55] 2026-03-11 22:03:22,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 15:03:55] 2026-03-11 22:03:22,925 | INFO     | job 7036325137 has state=finished
[2026-03-11 15:03:55] 2026-03-11 22:03:22,925 | INFO     | preparing for final server update for job 7036325137 in state='finished'
[2026-03-11 15:03:55] 2026-03-11 22:03:22,925 | INFO     | reading metadata from: /var/lib/boinc-client/slots/25/PanDA_Pilot-7036325137/jobReport.json
[2026-03-11 15:03:55] 2026-03-11 22:03:22,926 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/25/workernode_map.json
[2026-03-11 15:03:55] 2026-03-11 22:03:22,926 | INFO     | this job has now completed (state=finished)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,926 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,926 | INFO     | log transfer has been attempted: DONE
[2026-03-11 15:03:55] 2026-03-11 22:03:22,926 | INFO     | job 7036325137 has finished - writing final server update
[2026-03-11 15:03:55] 2026-03-11 22:03:22,927 | INFO     | total number of processed events: 400 (read)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | INFO     | using path: /var/lib/boinc-client/slots/25/PanDA_Pilot-7036325137/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | INFO     | extracted standard info from prmon json
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 15:03:55] 2026-03-11 22:03:22,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | fitting pss+swap vs Time
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | sum of square deviations: 170944600.5
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | sum of deviations: 642370595.5000001
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | mean x: 1773263949.5
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | mean y: 2354995.012195122
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | intersect: -6661164156.146937
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | chi2: 0.000194750096466692
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | current memory leak: 3.76 B/s (using 82 data points, chi2=0.00)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,931 | INFO     | could have reported an average CPU frequency of 4634 MHz (7 samples)
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | ..............................
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . Timing measurements:
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . get job = 0 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . initial setup = 6 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . payload setup = 2 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . stage-in = 0 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . payload execution = 5425 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . stage-out = 0 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | . log creation = 0 s
[2026-03-11 15:03:55] 2026-03-11 22:03:22,932 | INFO     | ..............................
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | 
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | job summary report
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | --------------------------------------------------
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | PanDA job id: 7036325137
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | task id: 48838462
[2026-03-11 15:03:55] 2026-03-11 22:03:23,053 | INFO     | errors: (none)
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | pilot state: finished 
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | transexitcode: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | exeerrorcode: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | exeerrordiag: 
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | exitcode: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | exitmsg: OK
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | cpuconsumptiontime: 20766 s
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | nevents: 400
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | neventsw: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | pid: 3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | pgrp: 3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | corecount: 4
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | event service: False
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | sizes: {0: 2280191, 11: 2280191, 5431: 2306900, 5432: 2306899, 5433: 2315969, 5435: 2316347}
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | --------------------------------------------------
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | 
[2026-03-11 15:03:55] 2026-03-11 22:03:23,054 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/25
[2026-03-11 15:03:55] 2026-03-11 22:03:23,064 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | job 7036325137 has completed (purged errors)
[2026-03-11 15:03:55] 2026-03-11 22:03:23,065 | INFO     | overall cleanup function is called
[2026-03-11 15:03:55] 2026-03-11 22:03:24,072 | INFO     | --- collectZombieJob: --- 10, [3823566]
[2026-03-11 15:03:55] 2026-03-11 22:03:24,072 | INFO     | zombie collector waiting for pid 3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:24,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 15:03:55] 2026-03-11 22:03:24,072 | INFO     | collected zombie processes
[2026-03-11 15:03:55] 2026-03-11 22:03:24,072 | INFO     | will attempt to kill all subprocesses of pid=3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:24,166 | INFO     | process IDs to be killed: [3823566] (in reverse order)
[2026-03-11 15:03:55] 2026-03-11 22:03:24,214 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 15:03:55] 2026-03-11 22:03:24,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 15:03:55] 2026-03-11 22:03:24,218 | INFO     | did not find any defunct processes belonging to 3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:24,221 | INFO     | did not find any defunct processes belonging to 3823566
[2026-03-11 15:03:55] 2026-03-11 22:03:24,221 | INFO     | ready for new job
[2026-03-11 15:03:55] 2026-03-11 22:03:24,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 15:03:55] 2026-03-11 22:03:24,222 | INFO     | **************************************
[2026-03-11 15:03:55] 2026-03-11 22:03:24,222 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 15:03:55] 2026-03-11 22:03:24,222 | INFO     | **************************************
[2026-03-11 15:03:55] 2026-03-11 22:03:24,222 | INFO     | 
[2026-03-11 15:03:55] 2026-03-11 22:03:24,223 | INFO     | architecture information:
[2026-03-11 15:03:55] 2026-03-11 22:03:24,223 | INFO     | executing command: cat /etc/os-release
[2026-03-11 15:03:55] 2026-03-11 22:03:24,232 | INFO     | cat /etc/os-release:
[2026-03-11 15:03:55] NAME="CentOS Linux"
[2026-03-11 15:03:55] VERSION="7 (Core)"
[2026-03-11 15:03:55] ID="centos"
[2026-03-11 15:03:55] ID_LIKE="rhel fedora"
[2026-03-11 15:03:55] VERSION_ID="7"
[2026-03-11 15:03:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 15:03:55] ANSI_COLOR="0;31"
[2026-03-11 15:03:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 15:03:55] HOME_URL="https://www.centos.org/"
[2026-03-11 15:03:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 15:03:55] 
[2026-03-11 15:03:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 15:03:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 15:03:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 15:03:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 15:03:55] 
[2026-03-11 15:03:55] 2026-03-11 22:03:24,233 | INFO     | **************************************
[2026-03-11 15:03:55] 2026-03-11 22:03:24,735 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/25
[2026-03-11 15:03:55] 2026-03-11 22:03:24,746 | INFO     | sufficient remaining disk space (399199174656 B)
[2026-03-11 15:03:55] 2026-03-11 22:03:24,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 15:03:55] 2026-03-11 22:03:24,746 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 15:03:55] 2026-03-11 22:03:24,747 | INFO     | update_server=False
[2026-03-11 15:03:55] 2026-03-11 22:03:24,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 15:03:55] 2026-03-11 22:03:24,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:03:55] 2026-03-11 22:03:24,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 15:03:55] 2026-03-11 22:03:24,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 15:03:55] 2026-03-11 22:03:24,748 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 15:03:55] 2026-03-11 22:03:24,748 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 15:03:55] 2026-03-11 22:03:24,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:03:55] 2026-03-11 22:03:24,749 | INFO     | will abort loop
[2026-03-11 15:03:55] 2026-03-11 22:03:25,078 | INFO     | all data control threads have been joined
[2026-03-11 15:03:55] 2026-03-11 22:03:25,181 | INFO     | all payload control threads have been joined
[2026-03-11 15:03:55] 2026-03-11 22:03:25,747 | INFO     | [job] retrieve thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:25,752 | INFO     | [job] queue monitor thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:25,754 | INFO     | [job] job monitor thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:25,825 | INFO     | [data] copytool_in thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:25,857 | INFO     | [payload] validate_post thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:25,911 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,038 | INFO     | all job control threads have been joined
[2026-03-11 15:03:55] 2026-03-11 22:03:26,083 | INFO     | [data] control thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,183 | INFO     | [payload] control thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,493 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,725 | INFO     | [job] validate thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,752 | INFO     | [data] copytool_out thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,842 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:26,918 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:27,043 | INFO     | [job] control thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:27,237 | INFO     | [payload] failed_post thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:28,753 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 15:03:55] 2026-03-11 22:03:45,765 | INFO     | [monitor] cgroup control has ended
[2026-03-11 15:03:55] 2026-03-11 22:03:46,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131524817540928)>', '<ExcThread(monitor, started 131524271777536)>']
[2026-03-11 15:03:55] 2026-03-11 22:03:51,118 | INFO     | all workflow threads have been joined
[2026-03-11 15:03:55] 2026-03-11 22:03:51,118 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 15:03:55] 2026-03-11 22:03:51,118 | INFO     | traces error code: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:51,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 15:03:55] 2026-03-11 22:03:55,082 | INFO     | PID=3811934 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 15:03:55] 2026-03-11 22:03:55,082 | INFO     | .. there are 7 such processes running
[2026-03-11 15:03:55] 2026-03-11 22:03:55,083 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 15:03:55] 2026-03-11 22:03:55,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 15:03:55] 2026-03-11 22:03:55,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 15:03:55] 2026-03-11 22:03:55,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 15:03:55] 2026-03-11 22:03:55,083 | INFO     | [monitor] control thread has ended
[2026-03-11 15:03:55] 2026-03-11 22:03:55,152 [wrapper] ==== pilot stdout END ====
[2026-03-11 15:03:55] 2026-03-11 22:03:55,153 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 15:03:55] 2026-03-11 22:03:55,155 [wrapper] pilotpid: 3811934
[2026-03-11 15:03:55] 2026-03-11 22:03:55,157 [wrapper] Pilot exit status: 0
[2026-03-11 15:03:55] 2026-03-11 22:03:55,162 [wrapper] pandaids: 7036325137
[2026-03-11 15:03:55] 2026-03-11 22:03:55,188 [wrapper] cleanup supervisor_pilot 3906181 3811935
[2026-03-11 15:03:55] 2026-03-11 22:03:55,189 [wrapper] Test setup, not cleaning
[2026-03-11 15:03:55] 2026-03-11 22:03:55,191 [wrapper] apfmon messages muted
[2026-03-11 15:03:55] 2026-03-11 22:03:55,193 [wrapper] ==== wrapper stdout END ====
[2026-03-11 15:03:55] 2026-03-11 22:03:55,194 [wrapper] ==== wrapper stderr END ====
[2026-03-11 15:03:55]  *** Error codes and diagnostics ***
[2026-03-11 15:03:55]     "exeErrorCode": 0,
[2026-03-11 15:03:55]     "exeErrorDiag": "",
[2026-03-11 15:03:55]     "pilotErrorCode": 0,
[2026-03-11 15:03:55]     "pilotErrorDiag": "",
[2026-03-11 15:03:55]  *** Listing of results directory ***
[2026-03-11 15:03:55] total 478436
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc    584627 Mar  3 05:35 pilot3.tar.gz
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc      5111 Mar  3 05:35 queuedata.json
[2026-03-11 15:03:55] -rwx------ 1 boinc boinc     36322 Mar  3 05:36 runpilot2-wrapper.sh
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc       100 Mar 11 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 15:03:55] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 13:32 run_atlas
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc       105 Mar 11 13:32 job.xml
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc 275391973 Mar 11 13:32 EVNT.48220133._000099.pool.root.1
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc    597965 Mar 11 13:32 input.tar.gz
[2026-03-11 15:03:55] drwxrwx--x 2 boinc boinc      4096 Mar 11 13:32 shared
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc         0 Mar 11 13:32 boinc_setup_complete
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc     15845 Mar 11 13:32 start_atlas.sh
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc     10207 Mar 11 13:32 init_data.xml
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc         0 Mar 11 13:32 boinc_lockfile
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc      2561 Mar 11 13:32 pandaJob.out
[2026-03-11 15:03:55] -rw------- 1 boinc boinc   1006235 Mar 11 13:32 agis_schedconf.cvmfs.json
[2026-03-11 15:03:55] -rw------- 1 boinc boinc   1511578 Mar 11 13:32 agis_ddmendpoints.agis.ALL.json
[2026-03-11 15:03:55] -rw------- 1 boinc boinc       425 Mar 11 13:32 workernode_map.json
[2026-03-11 15:03:55] drwx------ 5 boinc boinc      4096 Mar 11 13:32 pilot3
[2026-03-11 15:03:55] -rw------- 1 boinc boinc 208414032 Mar 11 15:02 HITS.48838462._005665.pool.root.1
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc       529 Mar 11 15:03 boinc_task_state.xml
[2026-03-11 15:03:55] -rw------- 1 boinc boinc      1031 Mar 11 15:03 memory_monitor_summary.json
[2026-03-11 15:03:55] -rw------- 1 boinc boinc    277380 Mar 11 15:03 log.48838462._005665.job.log.tgz.1
[2026-03-11 15:03:55] -rw------- 1 boinc boinc      6303 Mar 11 15:03 heartbeat.json
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc      8192 Mar 11 15:03 boinc_mmap_file
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc        27 Mar 11 15:03 wrapper_checkpoint.txt
[2026-03-11 15:03:55] -rw------- 1 boinc boinc        95 Mar 11 15:03 pilot_heartbeat.json
[2026-03-11 15:03:55] -rw------- 1 boinc boinc       822 Mar 11 15:03 pilotlog.txt
[2026-03-11 15:03:55] -rw------- 1 boinc boinc    809943 Mar 11 15:03 log.48838462._005665.job.log.1
[2026-03-11 15:03:55] -rw------- 1 boinc boinc       357 Mar 11 15:03 output.list
[2026-03-11 15:03:55] -rw------- 1 boinc boinc   1105920 Mar 11 15:03 result.tar.gz
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc       620 Mar 11 15:03 runtime_log
[2026-03-11 15:03:55] -rw------- 1 boinc boinc       656 Mar 11 15:03 vXxNDmy5eH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkaGLDmGl7Jxn.diag
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc      8963 Mar 11 15:03 runtime_log.err
[2026-03-11 15:03:55] -rw-r--r-- 1 boinc boinc     21419 Mar 11 15:03 stderr.txt
[2026-03-11 15:03:55] HITS file was successfully produced:
[2026-03-11 15:03:55] -rw------- 1 boinc boinc 208414032 Mar 11 15:02 shared/HITS.pool.root.1
[2026-03-11 15:03:55]  *** Contents of shared directory: ***
[2026-03-11 15:03:55] total 474160
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc 275391973 Mar 11 13:32 ATLAS.root_0
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc    597965 Mar 11 13:32 input.tar.gz
[2026-03-11 15:03:55] -rw-r--r-- 2 boinc boinc     15845 Mar 11 13:32 start_atlas.sh
[2026-03-11 15:03:55] -rw------- 1 boinc boinc 208414032 Mar 11 15:02 HITS.pool.root.1
[2026-03-11 15:03:55] -rw------- 1 boinc boinc   1105920 Mar 11 15:03 result.tar.gz
15:03:56 (3808070): run_atlas exited; CPU time 20822.116447
15:03:56 (3808070): called boinc_finish(0)

</stderr_txt>
]]>

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