Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:50:05 (4114617): wrapper (7.7.26015): starting
09:50:05 (4114617): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 09:50:05] Arguments: --nthreads 12
[2026-03-15 09:50:05] Threads: 12
[2026-03-15 09:50:05] Checking for CVMFS
[2026-03-15 09:50:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 09:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 09:50:06] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 09:50:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 09:50:06] 2.13.3.0 3534869 1619 72348 157308 2 188 2411804 4096000 17231 130560 0 10074776 99.999 55767 5084 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-15 09:50:06] CVMFS is ok
[2026-03-15 09:50:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 09:50:06] Checking for apptainer binary...
[2026-03-15 09:50:06] apptainer is not installed, using version from CVMFS
[2026-03-15 09:50:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 09:50:08] epyc7v12
[2026-03-15 09:50:08] apptainer works
[2026-03-15 09:50:08] Set ATHENA_PROC_NUMBER=12
[2026-03-15 09:50:08] Set ATHENA_CORE_NUMBER=12
[2026-03-15 09:50:08] Starting ATLAS job with PandaID=7036296813
[2026-03-15 09:50:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31427/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 16:25:35]  *** The last 200 lines of the pilot log: ***
[2026-03-15 16:25:35] 2026-03-15 16:24:35,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-15 16:25:35] 2026-03-15 16:24:35,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-15 16:25:35] 2026-03-15 16:24:35,582 | INFO     | fitting pss+swap vs Time
[2026-03-15 16:25:35] 2026-03-15 16:24:35,583 | INFO     | sum of square deviations: 17972496978.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,593 | INFO     | sum of deviations: 167265499997.00018
[2026-03-15 16:25:35] 2026-03-15 16:24:35,594 | INFO     | mean x: 1773580052.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,594 | INFO     | mean y: 2641701.2868217053
[2026-03-15 16:25:35] 2026-03-15 16:24:35,594 | INFO     | intersect: -16503620870.108982
[2026-03-15 16:25:35] 2026-03-15 16:24:35,598 | INFO     | chi2: 2.957077056791709
[2026-03-15 16:25:35] 2026-03-15 16:24:35,598 | INFO     | sum of square deviations: 17284846875.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,608 | INFO     | sum of deviations: 192436230848.99997
[2026-03-15 16:25:35] 2026-03-15 16:24:35,609 | INFO     | mean x: 1773579899.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,612 | INFO     | mean y: 2647218.2565445025
[2026-03-15 16:25:35] 2026-03-15 16:24:35,612 | INFO     | intersect: -19743031376.854256
[2026-03-15 16:25:35] 2026-03-15 16:24:35,613 | INFO     | chi2: 2.1598375663855633
[2026-03-15 16:25:35] 2026-03-15 16:24:35,613 | INFO     | current chi2=2.1598375663855633 (change=26.960389435069825 %)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,614 | INFO     | sum of square deviations: 16614964548.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,626 | INFO     | sum of deviations: 189144921132.00003
[2026-03-15 16:25:35] 2026-03-15 16:24:35,629 | INFO     | mean x: 1773579747.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,629 | INFO     | mean y: 2646468.949602122
[2026-03-15 16:25:35] 2026-03-15 16:24:35,629 | INFO     | intersect: -20187802953.82744
[2026-03-15 16:25:35] 2026-03-15 16:24:35,630 | INFO     | chi2: 2.158625976744308
[2026-03-15 16:25:35] 2026-03-15 16:24:35,639 | INFO     | current chi2=2.158625976744308 (change=0.05609633150714278 %)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,639 | INFO     | right removable region: 376
[2026-03-15 16:25:35] 2026-03-15 16:24:35,640 | INFO     | sum of square deviations: 17284846875.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,646 | INFO     | sum of deviations: 84880402213.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,649 | INFO     | mean x: 1773580204.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,650 | INFO     | mean y: 2659905.9816753925
[2026-03-15 16:25:35] 2026-03-15 16:24:35,650 | INFO     | intersect: -8706830099.928883
[2026-03-15 16:25:35] 2026-03-15 16:24:35,651 | INFO     | chi2: 1.1779824975524016
[2026-03-15 16:25:35] 2026-03-15 16:24:35,651 | INFO     | current chi2=1.1779824975524016 (change=60.16395667313257 %)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,656 | INFO     | sum of square deviations: 16614964548.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,663 | INFO     | sum of deviations: 55604631191.00001
[2026-03-15 16:25:35] 2026-03-15 16:24:35,671 | INFO     | mean x: 1773580357.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,671 | INFO     | mean y: 2666569.2811671086
[2026-03-15 16:25:35] 2026-03-15 16:24:35,671 | INFO     | intersect: -5932903221.053309
[2026-03-15 16:25:35] 2026-03-15 16:24:35,672 | INFO     | chi2: 1.027091558346468
[2026-03-15 16:25:35] 2026-03-15 16:24:35,672 | INFO     | current chi2=1.027091558346468 (change=12.809268348167576 %)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,672 | INFO     | left removable region: 20
[2026-03-15 16:25:35] 2026-03-15 16:24:35,673 | INFO     | sum of square deviations: 13990234405.0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,676 | INFO     | sum of deviations: 37487652327.499985
[2026-03-15 16:25:35] 2026-03-15 16:24:35,679 | INFO     | mean x: 1773580326.5
[2026-03-15 16:25:35] 2026-03-15 16:24:35,679 | INFO     | mean y: 2682548.137640449
[2026-03-15 16:25:35] 2026-03-15 16:24:35,679 | INFO     | intersect: -4749729793.928898
[2026-03-15 16:25:35] 2026-03-15 16:24:35,680 | INFO     | chi2: 0.0029359682520639294
[2026-03-15 16:25:35] 2026-03-15 16:24:35,680 | INFO     | current memory leak: 2.68 B/s (using 356 data points, chi2=0.00)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,681 | INFO     | could have reported an average CPU frequency of 2397 MHz (17 samples)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,681 | INFO     | ..............................
[2026-03-15 16:25:35] 2026-03-15 16:24:35,681 | INFO     | . Timing measurements:
[2026-03-15 16:25:35] 2026-03-15 16:24:35,681 | INFO     | . get job = 0 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,682 | INFO     | . initial setup = 14 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,682 | INFO     | . payload setup = 15 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,684 | INFO     | . stage-in = 0 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,684 | INFO     | . payload execution = 23601 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,684 | INFO     | . stage-out = 2 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,684 | INFO     | . log creation = 0 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,684 | INFO     | ..............................
[2026-03-15 16:25:35] 2026-03-15 16:24:35,750 | INFO     | PID=4118825 has CPU usage=18.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,761 | INFO     | .. there are 20 such processes running
[2026-03-15 16:25:35] 2026-03-15 16:24:35,919 | INFO     | 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,919 | INFO     | job summary report
[2026-03-15 16:25:35] 2026-03-15 16:24:35,919 | INFO     | --------------------------------------------------
[2026-03-15 16:25:35] 2026-03-15 16:24:35,919 | INFO     | PanDA job id: 7036296813
[2026-03-15 16:25:35] 2026-03-15 16:24:35,919 | INFO     | task id: 48848871
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | errors: (none)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | pilot state: finished 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | transexitcode: 0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | exeerrorcode: 0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | exeerrordiag: 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | exitcode: 0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | exitmsg: OK
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | cpuconsumptiontime: 154816 s
[2026-03-15 16:25:35] 2026-03-15 16:24:35,920 | INFO     | nevents: 400
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | neventsw: 0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | pid: 4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | pgrp: 4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | corecount: 12
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | event service: False
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | sizes: {0: 2280255, 1: 2280343, 23620: 2316346, 23623: 2325446, 23625: 2325648}
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | --------------------------------------------------
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | 
[2026-03-15 16:25:35] 2026-03-15 16:24:35,921 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,977 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,983 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 16:25:35] 2026-03-15 16:24:35,983 | INFO     | job 7036296813 has completed (purged errors)
[2026-03-15 16:25:35] 2026-03-15 16:24:35,983 | INFO     | overall cleanup function is called
[2026-03-15 16:25:35] 2026-03-15 16:24:36,586 | INFO     | number of running child processes to parent process 4123826: 1
[2026-03-15 16:25:35] 2026-03-15 16:24:36,586 | INFO     | maximum number of monitored processes: 6
[2026-03-15 16:25:35] 2026-03-15 16:24:36,586 | INFO     | aborting job monitoring since job object (job id=7036296813) has expired
[2026-03-15 16:25:35] 2026-03-15 16:24:37,004 | INFO     | --- collectZombieJob: --- 10, [4123826]
[2026-03-15 16:25:35] 2026-03-15 16:24:37,004 | INFO     | zombie collector waiting for pid 4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:37,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 16:25:35] 2026-03-15 16:24:37,004 | INFO     | collected zombie processes
[2026-03-15 16:25:35] 2026-03-15 16:24:37,005 | INFO     | will attempt to kill all subprocesses of pid=4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:38,123 | INFO     | process IDs to be killed: [4123826] (in reverse order)
[2026-03-15 16:25:35] 2026-03-15 16:24:38,365 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 16:25:35] 2026-03-15 16:24:38,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 16:25:35] 2026-03-15 16:24:38,383 | INFO     | did not find any defunct processes belonging to 4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:38,399 | INFO     | did not find any defunct processes belonging to 4123826
[2026-03-15 16:25:35] 2026-03-15 16:24:38,400 | INFO     | ready for new job
[2026-03-15 16:25:35] 2026-03-15 16:24:38,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 16:25:35] 2026-03-15 16:24:38,403 | INFO     | **************************************
[2026-03-15 16:25:35] 2026-03-15 16:24:38,403 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 16:25:35] 2026-03-15 16:24:38,404 | INFO     | **************************************
[2026-03-15 16:25:35] 2026-03-15 16:24:38,404 | INFO     | 
[2026-03-15 16:25:35] 2026-03-15 16:24:38,413 | INFO     | architecture information:
[2026-03-15 16:25:35] 2026-03-15 16:24:38,414 | INFO     | executing command: cat /etc/os-release
[2026-03-15 16:25:35] 2026-03-15 16:24:38,448 | INFO     | cat /etc/os-release:
[2026-03-15 16:25:35] NAME="CentOS Linux"
[2026-03-15 16:25:35] VERSION="7 (Core)"
[2026-03-15 16:25:35] ID="centos"
[2026-03-15 16:25:35] ID_LIKE="rhel fedora"
[2026-03-15 16:25:35] VERSION_ID="7"
[2026-03-15 16:25:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 16:25:35] ANSI_COLOR="0;31"
[2026-03-15 16:25:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 16:25:35] HOME_URL="https://www.centos.org/"
[2026-03-15 16:25:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 16:25:35] 
[2026-03-15 16:25:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 16:25:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 16:25:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 16:25:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 16:25:35] 
[2026-03-15 16:25:35] 2026-03-15 16:24:38,449 | INFO     | **************************************
[2026-03-15 16:25:35] 2026-03-15 16:24:38,952 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31427/slots/0
[2026-03-15 16:25:35] 2026-03-15 16:24:39,012 | INFO     | sufficient remaining disk space (169664839680 B)
[2026-03-15 16:25:35] 2026-03-15 16:24:39,012 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 16:25:35] 2026-03-15 16:24:39,012 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 16:25:35] 2026-03-15 16:24:39,012 | INFO     | update_server=False
[2026-03-15 16:25:35] 2026-03-15 16:24:39,012 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 16:25:35] 2026-03-15 16:24:39,092 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-15 16:25:35] 2026-03-15 16:24:39,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-15 16:25:35] 2026-03-15 16:24:39,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:25:35] 2026-03-15 16:24:39,093 | INFO     | will abort loop
[2026-03-15 16:25:35] 2026-03-15 16:24:39,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 16:25:35] 2026-03-15 16:24:39,945 | INFO     | all data control threads have been joined
[2026-03-15 16:25:35] 2026-03-15 16:24:40,011 | INFO     | all job control threads have been joined
[2026-03-15 16:25:35] 2026-03-15 16:24:40,017 | INFO     | [job] retrieve thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,086 | INFO     | all payload control threads have been joined
[2026-03-15 16:25:35] 2026-03-15 16:24:40,097 | INFO     | [job] job monitor thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,274 | INFO     | [payload] failed_post thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,308 | INFO     | [payload] validate_post thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,437 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 16:25:35] 2026-03-15 16:24:40,559 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 16:25:35] 2026-03-15 16:24:40,939 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,950 | INFO     | [data] control thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:40,986 | INFO     | [data] copytool_in thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:41,016 | INFO     | [job] control thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:41,091 | INFO     | [payload] control thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:41,162 | INFO     | [job] validate thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:41,413 | INFO     | [data] copytool_out thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:41,939 | INFO     | [job] queue monitor thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:44,560 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:24:49,994 | INFO     | job.realtimelogging is not enabled
[2026-03-15 16:25:35] 2026-03-15 16:24:50,999 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 16:25:35] 2026-03-15 16:25:08,954 | INFO     | PID=4118825 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-15 16:25:35] 2026-03-15 16:25:08,954 | INFO     | .. there are 20 such processes running
[2026-03-15 16:25:35] 2026-03-15 16:25:08,954 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 16:25:35] 2026-03-15 16:25:08,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 16:25:35] 2026-03-15 16:25:08,954 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 16:25:35] 2026-03-15 16:25:28,516 | INFO     | [monitor] cgroup control has ended
[2026-03-15 16:25:35] 2026-03-15 16:25:29,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137685653653312)>', '<ExcThread(monitor, started 137684966172416)>']
[2026-03-15 16:25:35] 2026-03-15 16:25:30,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 16:25:35] 2026-03-15 16:25:30,063 | INFO     | [monitor] control thread has ended
[2026-03-15 16:25:35] 2026-03-15 16:25:34,993 | INFO     | all workflow threads have been joined
[2026-03-15 16:25:35] 2026-03-15 16:25:34,993 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 16:25:35] 2026-03-15 16:25:34,994 | INFO     | traces error code: 0
[2026-03-15 16:25:35] 2026-03-15 16:25:34,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 16:25:35] 2026-03-15 16:25:35,277 [wrapper] ==== pilot stdout END ====
[2026-03-15 16:25:35] 2026-03-15 16:25:35,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 16:25:35] 2026-03-15 16:25:35,286 [wrapper] pilotpid: 4118825
[2026-03-15 16:25:35] 2026-03-15 16:25:35,292 [wrapper] Pilot exit status: 0
[2026-03-15 16:25:35] 2026-03-15 16:25:35,313 [wrapper] pandaids: 7036296813
[2026-03-15 16:25:35] 2026-03-15 16:25:35,447 [wrapper] cleanup supervisor_pilot  577001 4118826
[2026-03-15 16:25:35] 2026-03-15 16:25:35,457 [wrapper] Test setup, not cleaning
[2026-03-15 16:25:35] 2026-03-15 16:25:35,465 [wrapper] apfmon messages muted
[2026-03-15 16:25:35] 2026-03-15 16:25:35,474 [wrapper] ==== wrapper stdout END ====
[2026-03-15 16:25:35] 2026-03-15 16:25:35,484 [wrapper] ==== wrapper stderr END ====
[2026-03-15 16:25:35]  *** Error codes and diagnostics ***
[2026-03-15 16:25:35]     "exeErrorCode": 0,
[2026-03-15 16:25:35]     "exeErrorDiag": "",
[2026-03-15 16:25:35]     "pilotErrorCode": 0,
[2026-03-15 16:25:35]     "pilotErrorDiag": "",
[2026-03-15 16:25:35]  *** Listing of results directory ***
[2026-03-15 16:25:35] total 500188
[2026-03-15 16:25:35] -rw-r--r-- 1 boinc boinc    584627 Mar  3 13:35 pilot3.tar.gz
[2026-03-15 16:25:35] -rwx------ 1 boinc boinc     36322 Mar  3 13:36 runpilot2-wrapper.sh
[2026-03-15 16:25:35] -rw-r--r-- 1 boinc boinc      5111 Mar  3 13:38 queuedata.json
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc       100 Mar 15 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 16:25:35] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 09:50 run_atlas
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc       105 Mar 15 09:50 job.xml
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc 235593099 Mar 15 09:50 EVNT.48456265._000002.pool.root.1
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 09:50 start_atlas.sh
[2026-03-15 16:25:35] drwxrwx--x 2 boinc boinc      4096 Mar 15 09:50 shared
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc    597957 Mar 15 09:50 input.tar.gz
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc      6555 Mar 15 09:50 init_data.xml
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc         0 Mar 15 09:50 boinc_setup_complete
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc         0 Mar 15 09:50 boinc_lockfile
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc      2605 Mar 15 09:50 pandaJob.out
[2026-03-15 16:25:35] -rw------- 1 boinc boinc   1006481 Mar 15 09:50 agis_schedconf.cvmfs.json
[2026-03-15 16:25:35] -rw------- 1 boinc boinc       419 Mar 15 09:50 workernode_map.json
[2026-03-15 16:25:35] drwx------ 5 boinc boinc      4096 Mar 15 09:50 pilot3
[2026-03-15 16:25:35] -rw------- 1 boinc boinc 264871867 Mar 15 16:23 HITS.48848871._000040.pool.root.1
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc       532 Mar 15 16:23 boinc_task_state.xml
[2026-03-15 16:25:35] -rw------- 1 boinc boinc        95 Mar 15 16:24 pilot_heartbeat.json
[2026-03-15 16:25:35] -rw------- 1 boinc boinc      1026 Mar 15 16:24 memory_monitor_summary.json
[2026-03-15 16:25:35] -rw------- 1 boinc boinc   1511579 Mar 15 16:24 agis_ddmendpoints.agis.ALL.json
[2026-03-15 16:25:35] -rw------- 1 boinc boinc    656106 Mar 15 16:24 log.48848871._000040.job.log.tgz.1
[2026-03-15 16:25:35] -rw------- 1 boinc boinc      6273 Mar 15 16:24 heartbeat.json
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc      8192 Mar 15 16:25 boinc_mmap_file
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc        29 Mar 15 16:25 wrapper_checkpoint.txt
[2026-03-15 16:25:35] -rw------- 1 boinc boinc      5102 Mar 15 16:25 pilotlog.txt
[2026-03-15 16:25:35] -rw------- 1 boinc boinc   3241721 Mar 15 16:25 log.48848871._000040.job.log.1
[2026-03-15 16:25:35] -rw------- 1 boinc boinc       357 Mar 15 16:25 output.list
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc       620 Mar 15 16:25 runtime_log
[2026-03-15 16:25:35] -rw------- 1 boinc boinc   3911680 Mar 15 16:25 result.tar.gz
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc      9167 Mar 15 16:25 runtime_log.err
[2026-03-15 16:25:35] -rw------- 1 boinc boinc       658 Mar 15 16:25 RcpNDmQ6eH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzeGLDmyNfXRn.diag
[2026-03-15 16:25:35] -rw-rw-r-- 1 boinc boinc     20909 Mar 15 16:25 stderr.txt
[2026-03-15 16:25:35] HITS file was successfully produced:
[2026-03-15 16:25:35] -rw------- 1 boinc boinc 264871867 Mar 15 16:23 shared/HITS.pool.root.1
[2026-03-15 16:25:35]  *** Contents of shared directory: ***
[2026-03-15 16:25:35] total 493164
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc 235593099 Mar 15 09:50 ATLAS.root_0
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc     15845 Mar 15 09:50 start_atlas.sh
[2026-03-15 16:25:35] -rw-r--r-- 2 boinc boinc    597957 Mar 15 09:50 input.tar.gz
[2026-03-15 16:25:35] -rw------- 1 boinc boinc 264871867 Mar 15 16:23 HITS.pool.root.1
[2026-03-15 16:25:35] -rw------- 1 boinc boinc   3911680 Mar 15 16:25 result.tar.gz
16:25:37 (4114617): run_atlas exited; CPU time 156315.082890
16:25:37 (4114617): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN