Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:32:19 (23031): wrapper (7.7.26015): starting
03:32:19 (23031): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 03:32:19] Arguments: --nthreads 8
[2026-03-12 03:32:19] Threads: 8
[2026-03-12 03:32:19] Checking for CVMFS
[2026-03-12 03:32:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 03:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 03:32:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 03:32:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 03:32:24] 2.11.2.0 10131 124100 136324 157179 3 53 21890480 25165825 4834 130560 152 37779598 99.807 27575435 1003 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 03:32:24] CVMFS is ok
[2026-03-12 03:32:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 03:32:24] Checking for apptainer binary...
[2026-03-12 03:32:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 03:32:24] Running /usr/bin/apptainer --version
[2026-03-12 03:32:24] apptainer version 1.3.2-1.el7
[2026-03-12 03:32:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 03:32:44] cg-vwn460.simple-grid.lan
[2026-03-12 03:32:44] apptainer works
[2026-03-12 03:32:44] Set ATHENA_PROC_NUMBER=8
[2026-03-12 03:32:44] Set ATHENA_CORE_NUMBER=8
[2026-03-12 03:32:44] Starting ATLAS job with PandaID=7049802651
[2026-03-12 03:32:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 08:24:04]  *** The last 200 lines of the pilot log: ***
[2026-03-12 08:24:04] 2026-03-12 07:23:23,578 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-7049802651/jobReport.json
[2026-03-12 08:24:04] 2026-03-12 07:23:23,581 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-03-12 08:24:04] 2026-03-12 07:23:23,582 | INFO     | this job has now completed (state=finished)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,582 | INFO     | log transfer has been attempted: DONE
[2026-03-12 08:24:04] 2026-03-12 07:23:23,582 | INFO     | job 7049802651 has finished - writing final server update
[2026-03-12 08:24:04] 2026-03-12 07:23:23,583 | INFO     | total number of processed events: 400 (read)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,584 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7049802651/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,585 | INFO     | extracted standard info from prmon json
[2026-03-12 08:24:04] 2026-03-12 07:23:23,585 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 08:24:04] 2026-03-12 07:23:23,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 08:24:04] 2026-03-12 07:23:23,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 08:24:04] 2026-03-12 07:23:23,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 08:24:04] 2026-03-12 07:23:23,591 | INFO     | fitting pss+swap vs Time
[2026-03-12 08:24:04] 2026-03-12 07:23:23,592 | INFO     | sum of square deviations: 6519285025.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,594 | INFO     | sum of deviations: 59097098595.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,594 | INFO     | mean x: 1773291753.5
[2026-03-12 08:24:04] 2026-03-12 07:23:23,594 | INFO     | mean y: 2464716.007246377
[2026-03-12 08:24:04] 2026-03-12 07:23:23,594 | INFO     | intersect: -16072365145.307177
[2026-03-12 08:24:04] 2026-03-12 07:23:23,595 | INFO     | chi2: 4.605575698342484
[2026-03-12 08:24:04] 2026-03-12 07:23:23,595 | INFO     | sum of square deviations: 6171352920.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,611 | INFO     | sum of deviations: 76050206822.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,611 | INFO     | mean x: 1773291601.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,611 | INFO     | mean y: 2472028.5387453875
[2026-03-12 08:24:04] 2026-03-12 07:23:23,611 | INFO     | intersect: -21849979898.933506
[2026-03-12 08:24:04] 2026-03-12 07:23:23,612 | INFO     | chi2: 3.8589449363096224
[2026-03-12 08:24:04] 2026-03-12 07:23:23,612 | INFO     | current chi2=3.8589449363096224 (change=16.21145348455719 %)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,612 | INFO     | right removable region: 270
[2026-03-12 08:24:04] 2026-03-12 07:23:23,612 | INFO     | sum of square deviations: 6171352920.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,615 | INFO     | sum of deviations: -24886178356.99999
[2026-03-12 08:24:04] 2026-03-12 07:23:23,615 | INFO     | mean x: 1773291906.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,615 | INFO     | mean y: 2501449.029520295
[2026-03-12 08:24:04] 2026-03-12 07:23:23,615 | INFO     | intersect: 7153357869.624643
[2026-03-12 08:24:04] 2026-03-12 07:23:23,615 | INFO     | chi2: 1.0002948401102028
[2026-03-12 08:24:04] 2026-03-12 07:23:23,616 | INFO     | current chi2=1.0002948401102028 (change=78.28078603788443 %)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,616 | INFO     | sum of square deviations: 5836025702.5
[2026-03-12 08:24:04] 2026-03-12 07:23:23,618 | INFO     | sum of deviations: -32064965248.0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,618 | INFO     | mean x: 1773292058.5
[2026-03-12 08:24:04] 2026-03-12 07:23:23,618 | INFO     | mean y: 2504667.5939849624
[2026-03-12 08:24:04] 2026-03-12 07:23:23,619 | INFO     | intersect: 9745530337.614477
[2026-03-12 08:24:04] 2026-03-12 07:23:23,619 | INFO     | chi2: 0.9230580895760941
[2026-03-12 08:24:04] 2026-03-12 07:23:23,619 | INFO     | current chi2=0.9230580895760941 (change=7.721398475433445 %)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,619 | INFO     | left removable region: 20
[2026-03-12 08:24:04] 2026-03-12 07:23:23,620 | INFO     | sum of square deviations: 4844974562.5
[2026-03-12 08:24:04] 2026-03-12 07:23:23,622 | INFO     | sum of deviations: 3176790604.500001
[2026-03-12 08:24:04] 2026-03-12 07:23:23,622 | INFO     | mean x: 1773292180.5
[2026-03-12 08:24:04] 2026-03-12 07:23:23,622 | INFO     | mean y: 2504297.204
[2026-03-12 08:24:04] 2026-03-12 07:23:23,622 | INFO     | intersect: -1160221712.0609288
[2026-03-12 08:24:04] 2026-03-12 07:23:23,622 | INFO     | chi2: 0.06253420415651771
[2026-03-12 08:24:04] 2026-03-12 07:23:23,623 | INFO     | current memory leak: 0.66 B/s (using 250 data points, chi2=0.06)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,623 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,623 | INFO     | ..............................
[2026-03-12 08:24:04] 2026-03-12 07:23:23,623 | INFO     | . Timing measurements:
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . get job = 0 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . initial setup = 101 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . payload setup = 125 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . stage-in = 0 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . payload execution = 16957 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . stage-out = 3 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | . log creation = 1 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,624 | INFO     | ..............................
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | 
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | job summary report
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | --------------------------------------------------
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | PanDA job id: 7049802651
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | task id: 48967011
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | errors: (none)
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 08:24:04] 2026-03-12 07:23:23,744 | INFO     | pilot state: finished 
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | transexitcode: 0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | exeerrorcode: 0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | exeerrordiag: 
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | exitcode: 0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | exitmsg: OK
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | cpuconsumptiontime: 66872 s
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | nevents: 400
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | neventsw: 0
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | pid: 31733
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | pgrp: 31733
[2026-03-12 08:24:04] 2026-03-12 07:23:23,745 | INFO     | corecount: 8
[2026-03-12 08:24:04] 2026-03-12 07:23:23,746 | INFO     | event service: False
[2026-03-12 08:24:04] 2026-03-12 07:23:23,746 | INFO     | sizes: {0: 2279809, 1: 2280270, 17086: 2312207, 17092: 2321205, 17094: 2321261, 17096: 2321455}
[2026-03-12 08:24:04] 2026-03-12 07:23:23,746 | INFO     | --------------------------------------------------
[2026-03-12 08:24:04] 2026-03-12 07:23:23,746 | INFO     | 
[2026-03-12 08:24:04] 2026-03-12 07:23:23,746 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-03-12 08:24:04] 2026-03-12 07:23:24,047 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,047 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,047 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,047 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,047 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 08:24:04] 2026-03-12 07:23:24,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 08:24:04] 2026-03-12 07:23:24,049 | INFO     | job 7049802651 has completed (purged errors)
[2026-03-12 08:24:04] 2026-03-12 07:23:24,049 | INFO     | overall cleanup function is called
[2026-03-12 08:24:04] 2026-03-12 07:23:25,058 | INFO     | --- collectZombieJob: --- 10, [31733]
[2026-03-12 08:24:04] 2026-03-12 07:23:25,058 | INFO     | zombie collector waiting for pid 31733
[2026-03-12 08:24:04] 2026-03-12 07:23:25,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 08:24:04] 2026-03-12 07:23:25,058 | INFO     | collected zombie processes
[2026-03-12 08:24:04] 2026-03-12 07:23:25,058 | INFO     | will attempt to kill all subprocesses of pid=31733
[2026-03-12 08:24:04] 2026-03-12 07:23:25,159 | INFO     | process IDs to be killed: [31733] (in reverse order)
[2026-03-12 08:24:04] 2026-03-12 07:23:25,842 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 08:24:04] 2026-03-12 07:23:25,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 08:24:04] 2026-03-12 07:23:25,846 | INFO     | did not find any defunct processes belonging to 31733
[2026-03-12 08:24:04] 2026-03-12 07:23:25,848 | INFO     | did not find any defunct processes belonging to 31733
[2026-03-12 08:24:04] 2026-03-12 07:23:25,849 | INFO     | ready for new job
[2026-03-12 08:24:04] 2026-03-12 07:23:25,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 08:24:04] 2026-03-12 07:23:25,851 | INFO     | **************************************
[2026-03-12 08:24:04] 2026-03-12 07:23:25,851 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 08:24:04] 2026-03-12 07:23:25,851 | INFO     | **************************************
[2026-03-12 08:24:04] 2026-03-12 07:23:25,851 | INFO     | 
[2026-03-12 08:24:04] 2026-03-12 07:23:25,852 | INFO     | pilot is running in a VM
[2026-03-12 08:24:04] 2026-03-12 07:23:25,852 | INFO     | architecture information:
[2026-03-12 08:24:04] 2026-03-12 07:23:25,852 | INFO     | executing command: cat /etc/os-release
[2026-03-12 08:24:04] 2026-03-12 07:23:26,126 | INFO     | cat /etc/os-release:
[2026-03-12 08:24:04] NAME="CentOS Linux"
[2026-03-12 08:24:04] VERSION="7 (Core)"
[2026-03-12 08:24:04] ID="centos"
[2026-03-12 08:24:04] ID_LIKE="rhel fedora"
[2026-03-12 08:24:04] VERSION_ID="7"
[2026-03-12 08:24:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 08:24:04] ANSI_COLOR="0;31"
[2026-03-12 08:24:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 08:24:04] HOME_URL="https://www.centos.org/"
[2026-03-12 08:24:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 08:24:04] 
[2026-03-12 08:24:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 08:24:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 08:24:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 08:24:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 08:24:04] 
[2026-03-12 08:24:04] 2026-03-12 07:23:26,127 | INFO     | **************************************
[2026-03-12 08:24:04] 2026-03-12 07:23:26,631 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-03-12 08:24:04] 2026-03-12 07:23:26,901 | INFO     | sufficient remaining disk space (497253613568 B)
[2026-03-12 08:24:04] 2026-03-12 07:23:26,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 08:24:04] 2026-03-12 07:23:26,902 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 08:24:04] 2026-03-12 07:23:26,902 | INFO     | update_server=False
[2026-03-12 08:24:04] 2026-03-12 07:23:26,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 08:24:04] 2026-03-12 07:23:27,076 | INFO     | all payload control threads have been joined
[2026-03-12 08:24:04] 2026-03-12 07:23:27,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 08:24:04] 2026-03-12 07:23:27,269 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 08:24:04] 2026-03-12 07:23:27,270 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 08:24:04] 2026-03-12 07:23:27,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:24:04] 2026-03-12 07:23:27,270 | INFO     | will abort loop
[2026-03-12 08:24:04] 2026-03-12 07:23:27,443 | INFO     | all data control threads have been joined
[2026-03-12 08:24:04] 2026-03-12 07:23:27,908 | INFO     | [job] retrieve thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 08:24:04] 2026-03-12 07:23:28,082 | INFO     | [payload] control thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,154 | INFO     | [payload] validate_post thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,276 | INFO     | [job] job monitor thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,309 | INFO     | all job control threads have been joined
[2026-03-12 08:24:04] 2026-03-12 07:23:28,449 | INFO     | [data] control thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,519 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,729 | INFO     | [payload] failed_post thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:28,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 08:24:04] 2026-03-12 07:23:28,961 | INFO     | [data] copytool_in thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,076 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,163 | INFO     | [job] validate thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,260 | INFO     | [data] copytool_out thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,316 | INFO     | [job] control thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,333 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:29,765 | INFO     | [job] queue monitor thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:32,068 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 08:24:04] 2026-03-12 07:23:54,336 | INFO     | 17199s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-12 08:24:04] 2026-03-12 07:23:55,476 | INFO     | PID=27258 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 08:24:04] 2026-03-12 07:23:55,476 | INFO     | .. there are 9 such processes running
[2026-03-12 08:24:04] 2026-03-12 07:23:55,476 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 08:24:04] 2026-03-12 07:23:55,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 08:24:04] 2026-03-12 07:23:55,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 08:24:04] 2026-03-12 07:23:55,518 | INFO     | [monitor] cgroup control has ended
[2026-03-12 08:24:04] 2026-03-12 07:23:55,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941462419264)>', '<ExcThread(monitor, started 139941015176960)>']
[2026-03-12 08:24:04] 2026-03-12 07:23:56,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 08:24:04] 2026-03-12 07:23:56,483 | INFO     | [monitor] control thread has ended
[2026-03-12 08:24:04] 2026-03-12 07:24:00,720 | INFO     | all workflow threads have been joined
[2026-03-12 08:24:04] 2026-03-12 07:24:00,720 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 08:24:04] 2026-03-12 07:24:00,720 | INFO     | traces error code: 0
[2026-03-12 08:24:04] 2026-03-12 07:24:00,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 08:24:04] 2026-03-12 07:24:01,067 [wrapper] ==== pilot stdout END ====
[2026-03-12 08:24:04] 2026-03-12 07:24:01,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 08:24:04] 2026-03-12 07:24:01,273 [wrapper] pilotpid: 27258
[2026-03-12 08:24:04] 2026-03-12 07:24:01,334 [wrapper] Pilot exit status: 0
[2026-03-12 08:24:04] 2026-03-12 07:24:01,695 [wrapper] pandaids: 7049802651
[2026-03-12 08:24:04] 2026-03-12 07:24:02,537 [wrapper] cleanup supervisor_pilot  7949 27259
[2026-03-12 08:24:04] 2026-03-12 07:24:02,641 [wrapper] Test setup, not cleaning
[2026-03-12 08:24:04] 2026-03-12 07:24:02,742 [wrapper] apfmon messages muted
[2026-03-12 08:24:04] 2026-03-12 07:24:02,796 [wrapper] ==== wrapper stdout END ====
[2026-03-12 08:24:04] 2026-03-12 07:24:02,909 [wrapper] ==== wrapper stderr END ====
[2026-03-12 08:24:04]  *** Error codes and diagnostics ***
[2026-03-12 08:24:04]     "exeErrorCode": 0,
[2026-03-12 08:24:04]     "exeErrorDiag": "",
[2026-03-12 08:24:04]     "pilotErrorCode": 0,
[2026-03-12 08:24:04]     "pilotErrorDiag": "",
[2026-03-12 08:24:04]  *** Listing of results directory ***
[2026-03-12 08:24:04] total 427212
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc    585013 Mar 11 13:15 pilot3.tar.gz
[2026-03-12 08:24:04] -rwx------. 1 boinc boinc     36322 Mar 11 13:18 runpilot2-wrapper.sh
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc      5111 Mar 11 13:20 queuedata.json
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc       100 Mar 12 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 08:24:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 03:32 run_atlas
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc       105 Mar 12 03:32 job.xml
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc 217642508 Mar 12 03:32 EVNT.48967008._000473.pool.root.1
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc     15845 Mar 12 03:32 start_atlas.sh
[2026-03-12 08:24:04] drwxrwx--x. 2 boinc boinc        68 Mar 12 03:32 shared
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc    597520 Mar 12 03:32 input.tar.gz
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc      6391 Mar 12 03:32 init_data.xml
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc         0 Mar 12 03:32 boinc_lockfile
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc      2563 Mar 12 03:32 pandaJob.out
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc       413 Mar 12 03:38 workernode_map.json
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc   1006235 Mar 12 03:38 agis_schedconf.cvmfs.json
[2026-03-12 08:24:04] drwx------. 5 boinc boinc      4096 Mar 12 03:38 pilot3
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc 210137608 Mar 12 08:21 HITS.48967011._011954.pool.root.1
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc       531 Mar 12 08:22 boinc_task_state.xml
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc      1012 Mar 12 08:23 memory_monitor_summary.json
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc   1511578 Mar 12 08:23 agis_ddmendpoints.agis.ALL.json
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc        95 Mar 12 08:23 pilot_heartbeat.json
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc    502273 Mar 12 08:23 log.48967011._011954.job.log.tgz.1
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc      6315 Mar 12 08:23 heartbeat.json
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc      8192 Mar 12 08:23 boinc_mmap_file
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc        28 Mar 12 08:23 wrapper_checkpoint.txt
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc      5182 Mar 12 08:24 pilotlog.txt
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc   2379769 Mar 12 08:24 log.48967011._011954.job.log.1
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc       357 Mar 12 08:24 output.list
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc       620 Mar 12 08:24 runtime_log
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc   2897920 Mar 12 08:24 result.tar.gz
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc      8816 Mar 12 08:24 runtime_log.err
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc       656 Mar 12 08:24 BrdKDmehXK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRgjLDmP5T7Km.diag
[2026-03-12 08:24:04] -rw-r--r--. 1 boinc boinc     20909 Mar 12 08:24 stderr.txt
[2026-03-12 08:24:04] HITS file was successfully produced:
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc 210137608 Mar 12 08:21 shared/HITS.pool.root.1
[2026-03-12 08:24:04]  *** Contents of shared directory: ***
[2026-03-12 08:24:04] total 421192
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc 217642508 Mar 12 03:32 ATLAS.root_0
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc     15845 Mar 12 03:32 start_atlas.sh
[2026-03-12 08:24:04] -rw-r--r--. 2 boinc boinc    597520 Mar 12 03:32 input.tar.gz
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc 210137608 Mar 12 08:21 HITS.pool.root.1
[2026-03-12 08:24:04] -rw-------. 1 boinc boinc   2897920 Mar 12 08:24 result.tar.gz
08:24:06 (23031): run_atlas exited; CPU time 67122.765059
08:24:06 (23031): called boinc_finish(0)

</stderr_txt>
]]>

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