Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
08:16:55 (110085): wrapper (7.7.26015): starting
08:16:55 (110085): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 08:16:55] Arguments: --nthreads 4
[2026-03-12 08:16:55] Threads: 4
[2026-03-12 08:16:55] Checking for CVMFS
[2026-03-12 08:16:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 08:16:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 08:16:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 08:16:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 08:16:55] 2.13.2.0 3550 13 55512 157186 2 11 3084491 4096001 7523 130560 0 340247 99.994 4189 607 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-12 08:16:55] CVMFS is ok
[2026-03-12 08:16:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 08:16:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 08:16:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-12 08:16:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-12 08:16:55] Further information can be found at the LHC@home message board.
[2026-03-12 08:16:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 08:16:55] Checking for apptainer binary...
[2026-03-12 08:16:55] apptainer is not installed, using version from CVMFS
[2026-03-12 08:16:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 08:16:55] ng-jupiter
[2026-03-12 08:16:55] apptainer works
[2026-03-12 08:16:55] Set ATHENA_PROC_NUMBER=4
[2026-03-12 08:16:55] Set ATHENA_CORE_NUMBER=4
[2026-03-12 08:16:55] Starting ATLAS job with PandaID=7036277354
[2026-03-12 08:16:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 10:30:29]  *** The last 200 lines of the pilot log: ***
[2026-03-12 10:30:29] 2026-03-12 08:29:55,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-12 10:30:29] 2026-03-12 08:29:55,716 | INFO     | time since job start (7963s) is within the limit (349056.0s)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,228 | INFO     | job 7036277354 has state=finished
[2026-03-12 10:30:29] 2026-03-12 08:29:57,229 | INFO     | preparing for final server update for job 7036277354 in state='finished'
[2026-03-12 10:30:29] 2026-03-12 08:29:57,229 | INFO     | reading metadata from: /var/lib/boinc-client/slots/5/PanDA_Pilot-7036277354/jobReport.json
[2026-03-12 10:30:29] 2026-03-12 08:29:57,232 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/5/workernode_map.json
[2026-03-12 10:30:29] 2026-03-12 08:29:57,233 | INFO     | this job has now completed (state=finished)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,233 | INFO     | log transfer has been attempted: DONE
[2026-03-12 10:30:29] 2026-03-12 08:29:57,233 | INFO     | job 7036277354 has finished - writing final server update
[2026-03-12 10:30:29] 2026-03-12 08:29:57,234 | INFO     | total number of processed events: 400 (read)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,249 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-7036277354/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,250 | INFO     | extracted standard info from prmon json
[2026-03-12 10:30:29] 2026-03-12 08:29:57,250 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 10:30:29] 2026-03-12 08:29:57,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 10:30:29] 2026-03-12 08:29:57,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 10:30:29] 2026-03-12 08:29:57,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 10:30:29] 2026-03-12 08:29:57,253 | INFO     | fitting pss+swap vs Time
[2026-03-12 10:30:29] 2026-03-12 08:29:57,254 | INFO     | sum of square deviations: 697054930.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,255 | INFO     | sum of deviations: -21898203401.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,256 | INFO     | mean x: 1773300222.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,256 | INFO     | mean y: 1900200.8244274808
[2026-03-12 10:30:29] 2026-03-12 08:29:57,256 | INFO     | intersect: 55710693412.2783
[2026-03-12 10:30:29] 2026-03-12 08:29:57,256 | INFO     | chi2: 2.6873421107401985
[2026-03-12 10:30:29] 2026-03-12 08:29:57,257 | INFO     | sum of square deviations: 620244187.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,257 | INFO     | sum of deviations: -12120056907.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,258 | INFO     | mean x: 1773300069.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,258 | INFO     | mean y: 1919315.0873015872
[2026-03-12 10:30:29] 2026-03-12 08:29:57,258 | INFO     | intersect: 34653590688.32964
[2026-03-12 10:30:29] 2026-03-12 08:29:57,258 | INFO     | chi2: 2.093348526672649
[2026-03-12 10:30:29] 2026-03-12 08:29:57,258 | INFO     | current chi2=2.093348526672649 (change=22.103385411689942 %)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,259 | INFO     | right removable region: 125
[2026-03-12 10:30:29] 2026-03-12 08:29:57,259 | INFO     | sum of square deviations: 620244187.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,260 | INFO     | sum of deviations: -37603931259.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,260 | INFO     | mean x: 1773300374.5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,260 | INFO     | mean y: 1930814.5952380951
[2026-03-12 10:30:29] 2026-03-12 08:29:57,260 | INFO     | intersect: 107512918791.63873
[2026-03-12 10:30:29] 2026-03-12 08:29:57,260 | INFO     | chi2: 0.9582966862676077
[2026-03-12 10:30:29] 2026-03-12 08:29:57,261 | INFO     | current chi2=0.9582966862676077 (change=64.34035389697162 %)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,261 | INFO     | sum of square deviations: 549294020.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,262 | INFO     | sum of deviations: -36811349506.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,262 | INFO     | mean x: 1773300527.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,262 | INFO     | mean y: 1929076.7851239669
[2026-03-12 10:30:29] 2026-03-12 08:29:57,262 | INFO     | intersect: 118840989947.26573
[2026-03-12 10:30:29] 2026-03-12 08:29:57,262 | INFO     | chi2: 0.9121372694418688
[2026-03-12 10:30:29] 2026-03-12 08:29:57,263 | INFO     | current chi2=0.9121372694418688 (change=4.816818996371724 %)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,263 | INFO     | left removable region: 20
[2026-03-12 10:30:29] 2026-03-12 08:29:57,263 | INFO     | sum of square deviations: 358927660.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | sum of deviations: -22965993089.999996
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | mean x: 1773300649.0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | mean y: 1945873.5428571429
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | intersect: 113466621322.14581
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | chi2: 0.2804200627733197
[2026-03-12 10:30:29] 2026-03-12 08:29:57,264 | INFO     | current memory leak: -63.99 B/s (using 105 data points, chi2=0.28)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,265 | INFO     | could have reported an average CPU frequency of 2076 MHz (8 samples)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,265 | INFO     | ..............................
[2026-03-12 10:30:29] 2026-03-12 08:29:57,265 | INFO     | . Timing measurements:
[2026-03-12 10:30:29] 2026-03-12 08:29:57,265 | INFO     | . get job = 0 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,265 | INFO     | . initial setup = 7 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | . payload setup = 6 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | . stage-in = 0 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | . payload execution = 7937 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | . stage-out = 0 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | . log creation = 0 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,266 | INFO     | ..............................
[2026-03-12 10:30:29] 2026-03-12 08:29:57,337 | INFO     | 
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | job summary report
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | --------------------------------------------------
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | PanDA job id: 7036277354
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | task id: 48838581
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | errors: (none)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 10:30:29] 2026-03-12 08:29:57,338 | INFO     | pilot state: finished 
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | transexitcode: 0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | exeerrorcode: 0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | exeerrordiag: 
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | exitcode: 0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | exitmsg: OK
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | cpuconsumptiontime: 30819 s
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | nevents: 400
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | neventsw: 0
[2026-03-12 10:30:29] 2026-03-12 08:29:57,339 | INFO     | pid: 174005
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | pgrp: 174005
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | corecount: 4
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | event service: False
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | sizes: {0: 2280062, 1: 2280268, 11: 2280296, 7948: 2307875, 7949: 2316887, 7952: 2316943, 7954: 2317265}
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | --------------------------------------------------
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | 
[2026-03-12 10:30:29] 2026-03-12 08:29:57,340 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-03-12 10:30:29] 2026-03-12 08:29:57,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 10:30:29] 2026-03-12 08:29:57,361 | INFO     | job 7036277354 has completed (purged errors)
[2026-03-12 10:30:29] 2026-03-12 08:29:57,362 | INFO     | overall cleanup function is called
[2026-03-12 10:30:29] 2026-03-12 08:29:58,370 | INFO     | --- collectZombieJob: --- 10, [174005]
[2026-03-12 10:30:29] 2026-03-12 08:29:58,370 | INFO     | zombie collector waiting for pid 174005
[2026-03-12 10:30:29] 2026-03-12 08:29:58,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 10:30:29] 2026-03-12 08:29:58,371 | INFO     | collected zombie processes
[2026-03-12 10:30:29] 2026-03-12 08:29:58,371 | INFO     | will attempt to kill all subprocesses of pid=174005
[2026-03-12 10:30:29] 2026-03-12 08:29:58,601 | INFO     | process IDs to be killed: [174005] (in reverse order)
[2026-03-12 10:30:29] 2026-03-12 08:29:58,680 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 10:30:29] 2026-03-12 08:29:58,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 10:30:29] 2026-03-12 08:29:58,687 | INFO     | did not find any defunct processes belonging to 174005
[2026-03-12 10:30:29] 2026-03-12 08:29:58,693 | INFO     | did not find any defunct processes belonging to 174005
[2026-03-12 10:30:29] 2026-03-12 08:29:58,694 | INFO     | ready for new job
[2026-03-12 10:30:29] 2026-03-12 08:29:58,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 10:30:29] 2026-03-12 08:29:58,696 | INFO     | **************************************
[2026-03-12 10:30:29] 2026-03-12 08:29:58,696 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 10:30:29] 2026-03-12 08:29:58,696 | INFO     | **************************************
[2026-03-12 10:30:29] 2026-03-12 08:29:58,696 | INFO     | 
[2026-03-12 10:30:29] 2026-03-12 08:29:58,700 | INFO     | architecture information:
[2026-03-12 10:30:29] 2026-03-12 08:29:58,701 | INFO     | executing command: cat /etc/os-release
[2026-03-12 10:30:29] 2026-03-12 08:29:58,714 | INFO     | cat /etc/os-release:
[2026-03-12 10:30:29] NAME="CentOS Linux"
[2026-03-12 10:30:29] VERSION="7 (Core)"
[2026-03-12 10:30:29] ID="centos"
[2026-03-12 10:30:29] ID_LIKE="rhel fedora"
[2026-03-12 10:30:29] VERSION_ID="7"
[2026-03-12 10:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 10:30:29] ANSI_COLOR="0;31"
[2026-03-12 10:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 10:30:29] HOME_URL="https://www.centos.org/"
[2026-03-12 10:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 10:30:29] 
[2026-03-12 10:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 10:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 10:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 10:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 10:30:29] 
[2026-03-12 10:30:29] 2026-03-12 08:29:58,715 | INFO     | **************************************
[2026-03-12 10:30:29] 2026-03-12 08:29:59,218 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-12 10:30:29] 2026-03-12 08:29:59,233 | INFO     | sufficient remaining disk space (2952129413120 B)
[2026-03-12 10:30:29] 2026-03-12 08:29:59,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 10:30:29] 2026-03-12 08:29:59,234 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 10:30:29] 2026-03-12 08:29:59,237 | INFO     | update_server=False
[2026-03-12 10:30:29] 2026-03-12 08:29:59,237 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 10:30:29] 2026-03-12 08:29:59,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:30:29] 2026-03-12 08:29:59,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:30:29] 2026-03-12 08:29:59,239 | INFO     | aborting loop
[2026-03-12 10:30:29] 2026-03-12 08:29:59,357 | INFO     | all job control threads have been joined
[2026-03-12 10:30:29] 2026-03-12 08:29:59,669 | INFO     | all payload control threads have been joined
[2026-03-12 10:30:29] 2026-03-12 08:30:00,243 | INFO     | [job] retrieve thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,244 | INFO     | [job] queue monitor thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,245 | INFO     | [job] job monitor thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,251 | INFO     | all data control threads have been joined
[2026-03-12 10:30:29] 2026-03-12 08:30:00,362 | INFO     | [job] control thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,491 | INFO     | [job] validate thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,628 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,675 | INFO     | [payload] control thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,715 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 10:30:29] 2026-03-12 08:30:00,751 | INFO     | [payload] validate_post thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:00,986 | INFO     | [data] copytool_in thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:01,131 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:01,256 | INFO     | [data] control thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:01,423 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:01,558 | INFO     | [payload] failed_post thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:01,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 10:30:29] 2026-03-12 08:30:02,742 | INFO     | [data] copytool_out thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:05,598 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 10:30:29] 2026-03-12 08:30:21,907 | INFO     | [monitor] cgroup control has ended
[2026-03-12 10:30:29] 2026-03-12 08:30:23,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651311253312)>', '<ExcThread(monitor, started 139650190538496)>']
[2026-03-12 10:30:29] 2026-03-12 08:30:28,098 | INFO     | all workflow threads have been joined
[2026-03-12 10:30:29] 2026-03-12 08:30:28,098 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 10:30:29] 2026-03-12 08:30:28,099 | INFO     | traces error code: 0
[2026-03-12 10:30:29] 2026-03-12 08:30:28,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 10:30:29] 2026-03-12 08:30:29,060 | INFO     | PID=132353 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-12 10:30:29] 2026-03-12 08:30:29,060 | INFO     | .. there are 6 such processes running
[2026-03-12 10:30:29] 2026-03-12 08:30:29,061 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 10:30:29] 2026-03-12 08:30:29,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 10:30:29] 2026-03-12 08:30:29,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 10:30:29] 2026-03-12 08:30:29,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 10:30:29] 2026-03-12 08:30:29,061 | INFO     | [monitor] control thread has ended
[2026-03-12 10:30:29] 2026-03-12 08:30:29,182 [wrapper] ==== pilot stdout END ====
[2026-03-12 10:30:29] 2026-03-12 08:30:29,185 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 10:30:29] 2026-03-12 08:30:29,188 [wrapper] pilotpid: 132353
[2026-03-12 10:30:29] 2026-03-12 08:30:29,190 [wrapper] Pilot exit status: 0
[2026-03-12 10:30:29] 2026-03-12 08:30:29,199 [wrapper] pandaids: 7036277354
[2026-03-12 10:30:29] 2026-03-12 08:30:29,231 [wrapper] cleanup supervisor_pilot  213023 132354
[2026-03-12 10:30:29] 2026-03-12 08:30:29,234 [wrapper] Test setup, not cleaning
[2026-03-12 10:30:29] 2026-03-12 08:30:29,237 [wrapper] apfmon messages muted
[2026-03-12 10:30:29] 2026-03-12 08:30:29,239 [wrapper] ==== wrapper stdout END ====
[2026-03-12 10:30:29] 2026-03-12 08:30:29,241 [wrapper] ==== wrapper stderr END ====
[2026-03-12 10:30:29]  *** Error codes and diagnostics ***
[2026-03-12 10:30:29]     "exeErrorCode": 0,
[2026-03-12 10:30:29]     "exeErrorDiag": "",
[2026-03-12 10:30:29]     "pilotErrorCode": 0,
[2026-03-12 10:30:29]     "pilotErrorDiag": "",
[2026-03-12 10:30:29]  *** Listing of results directory ***
[2026-03-12 10:30:29] total 510124
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc    584627 Mar  3 13:44 pilot3.tar.gz
[2026-03-12 10:30:29] -rwx------ 1 boinc boinc     36322 Mar  3 13:47 runpilot2-wrapper.sh
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc      5111 Mar  3 13:49 queuedata.json
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc       100 Mar 12 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 10:30:29] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 08:16 run_atlas
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc       105 Mar 12 08:16 job.xml
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc      6602 Mar 12 08:16 init_data.xml
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc 290142492 Mar 12 08:16 EVNT.48220205._000224.pool.root.1
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc     15845 Mar 12 08:16 start_atlas.sh
[2026-03-12 10:30:29] drwxrwx--x 2 boinc boinc      4096 Mar 12 08:16 shared
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc    597965 Mar 12 08:16 input.tar.gz
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc         0 Mar 12 08:16 boinc_lockfile
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc      2588 Mar 12 08:16 pandaJob.out
[2026-03-12 10:30:29] -rw------- 1 boinc boinc   1006243 Mar 12 08:17 agis_schedconf.cvmfs.json
[2026-03-12 10:30:29] -rw------- 1 boinc boinc   1511578 Mar 12 08:17 agis_ddmendpoints.agis.ALL.json
[2026-03-12 10:30:29] -rw------- 1 boinc boinc       434 Mar 12 08:17 workernode_map.json
[2026-03-12 10:30:29] drwx------ 5 boinc boinc      4096 Mar 12 08:17 pilot3
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc       529 Mar 12 10:29 boinc_task_state.xml
[2026-03-12 10:30:29] -rw------- 1 boinc boinc 225354385 Mar 12 10:29 HITS.48838581._005383.pool.root.1
[2026-03-12 10:30:29] -rw------- 1 boinc boinc      1024 Mar 12 10:29 memory_monitor_summary.json
[2026-03-12 10:30:29] -rw------- 1 boinc boinc    318099 Mar 12 10:29 log.48838581._005383.job.log.tgz.1
[2026-03-12 10:30:29] -rw------- 1 boinc boinc      6332 Mar 12 10:29 heartbeat.json
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc      8192 Mar 12 10:30 boinc_mmap_file
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc        27 Mar 12 10:30 wrapper_checkpoint.txt
[2026-03-12 10:30:29] -rw------- 1 boinc boinc       821 Mar 12 10:30 pilotlog.txt
[2026-03-12 10:30:29] -rw------- 1 boinc boinc        95 Mar 12 10:30 pilot_heartbeat.json
[2026-03-12 10:30:29] -rw------- 1 boinc boinc   1149528 Mar 12 10:30 log.48838581._005383.job.log.1
[2026-03-12 10:30:29] -rw------- 1 boinc boinc       357 Mar 12 10:30 output.list
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc       620 Mar 12 10:30 runtime_log
[2026-03-12 10:30:29] -rw------- 1 boinc boinc   1484800 Mar 12 10:30 result.tar.gz
[2026-03-12 10:30:29] -rw------- 1 boinc boinc       726 Mar 12 10:30 VmmLDm9OdH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcYGLDm8B0DOm.diag
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc      9140 Mar 12 10:30 runtime_log.err
[2026-03-12 10:30:29] -rw-r--r-- 1 boinc boinc     21475 Mar 12 10:30 stderr.txt
[2026-03-12 10:30:29] HITS file was successfully produced:
[2026-03-12 10:30:29] -rw------- 1 boinc boinc 225354385 Mar 12 10:29 shared/HITS.pool.root.1
[2026-03-12 10:30:29]  *** Contents of shared directory: ***
[2026-03-12 10:30:29] total 505480
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc 290142492 Mar 12 08:16 ATLAS.root_0
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc     15845 Mar 12 08:16 start_atlas.sh
[2026-03-12 10:30:29] -rw-r--r-- 2 boinc boinc    597965 Mar 12 08:16 input.tar.gz
[2026-03-12 10:30:29] -rw------- 1 boinc boinc 225354385 Mar 12 10:29 HITS.pool.root.1
[2026-03-12 10:30:29] -rw------- 1 boinc boinc   1484800 Mar 12 10:30 result.tar.gz
10:30:30 (110085): run_atlas exited; CPU time 31048.145183
10:30:30 (110085): called boinc_finish(0)

</stderr_txt>
]]>

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