Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:56:16 (16262): wrapper (7.7.26015): starting
03:56:16 (16262): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 03:56:16] Arguments: --nthreads 8
[2026-03-12 03:56:16] Threads: 8
[2026-03-12 03:56:16] Checking for CVMFS
[2026-03-12 03:56:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 03:56:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 03:56:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 03:56:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 03:56:20] 2.11.2.0 773 124105 133112 157179 0 53 20541078 25165825 4784 130560 153 36563513 99.810 28836703 1056 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 03:56:20] CVMFS is ok
[2026-03-12 03:56:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 03:56:20] Checking for apptainer binary...
[2026-03-12 03:56:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 03:56:20] Running /usr/bin/apptainer --version
[2026-03-12 03:56:21] apptainer version 1.3.2-1.el7
[2026-03-12 03:56:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 03:56:34] cg-vwn384.simple-grid.lan
[2026-03-12 03:56:34] apptainer works
[2026-03-12 03:56:34] Set ATHENA_PROC_NUMBER=8
[2026-03-12 03:56:34] Set ATHENA_CORE_NUMBER=8
[2026-03-12 03:56:34] Starting ATLAS job with PandaID=7049824376
[2026-03-12 03:56:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 09:06:27]  *** The last 200 lines of the pilot log: ***
[2026-03-12 09:06:27] 2026-03-12 08:05:23,908 | INFO     | job 7049824376 has finished - writing final server update
[2026-03-12 09:06:27] 2026-03-12 08:05:23,909 | INFO     | total number of processed events: 400 (read)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,911 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-7049824376/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,911 | INFO     | extracted standard info from prmon json
[2026-03-12 09:06:27] 2026-03-12 08:05:23,912 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 09:06:27] 2026-03-12 08:05:23,912 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 09:06:27] 2026-03-12 08:05:23,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 09:06:27] 2026-03-12 08:05:23,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 09:06:27] 2026-03-12 08:05:23,918 | INFO     | fitting pss+swap vs Time
[2026-03-12 09:06:27] 2026-03-12 08:05:23,919 | INFO     | sum of square deviations: 7960484140.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,922 | INFO     | sum of deviations: 130493504885.00003
[2026-03-12 09:06:27] 2026-03-12 08:05:23,922 | INFO     | mean x: 1773293738.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,922 | INFO     | mean y: 2436678.0779661015
[2026-03-12 09:06:27] 2026-03-12 08:05:23,922 | INFO     | intersect: -29066563522.485588
[2026-03-12 09:06:27] 2026-03-12 08:05:23,923 | INFO     | chi2: 6.751106021794559
[2026-03-12 09:06:27] 2026-03-12 08:05:23,924 | INFO     | sum of square deviations: 7562532492.5
[2026-03-12 09:06:27] 2026-03-12 08:05:23,931 | INFO     | sum of deviations: 147589942555.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,931 | INFO     | mean x: 1773293585.5
[2026-03-12 09:06:27] 2026-03-12 08:05:23,931 | INFO     | mean y: 2443127.924137931
[2026-03-12 09:06:27] 2026-03-12 08:05:23,931 | INFO     | intersect: -34605050945.87338
[2026-03-12 09:06:27] 2026-03-12 08:05:23,932 | INFO     | chi2: 6.023439693001533
[2026-03-12 09:06:27] 2026-03-12 08:05:23,932 | INFO     | current chi2=6.023439693001533 (change=10.778475800023056 %)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,932 | INFO     | right removable region: 289
[2026-03-12 09:06:27] 2026-03-12 08:05:23,933 | INFO     | sum of square deviations: 7562532492.5
[2026-03-12 09:06:27] 2026-03-12 08:05:23,936 | INFO     | sum of deviations: 28480923515.500008
[2026-03-12 09:06:27] 2026-03-12 08:05:23,936 | INFO     | mean x: 1773293890.5
[2026-03-12 09:06:27] 2026-03-12 08:05:23,936 | INFO     | mean y: 2475746.996551724
[2026-03-12 09:06:27] 2026-03-12 08:05:23,936 | INFO     | intersect: -6675848969.746336
[2026-03-12 09:06:27] 2026-03-12 08:05:23,937 | INFO     | chi2: 2.054779396011383
[2026-03-12 09:06:27] 2026-03-12 08:05:23,937 | INFO     | current chi2=2.054779396011383 (change=69.56381088701687 %)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,937 | INFO     | sum of square deviations: 7178069470.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,940 | INFO     | sum of deviations: -16749559217.999996
[2026-03-12 09:06:27] 2026-03-12 08:05:23,940 | INFO     | mean x: 1773294043.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,940 | INFO     | mean y: 2493584.1157894735
[2026-03-12 09:06:27] 2026-03-12 08:05:23,941 | INFO     | intersect: 4140360138.387955
[2026-03-12 09:06:27] 2026-03-12 08:05:23,941 | INFO     | chi2: 0.8439426936349814
[2026-03-12 09:06:27] 2026-03-12 08:05:23,941 | INFO     | current chi2=0.8439426936349814 (change=58.92781992688882 %)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,942 | INFO     | sum of square deviations: 6806862510.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,945 | INFO     | sum of deviations: -25036587581.999996
[2026-03-12 09:06:27] 2026-03-12 08:05:23,945 | INFO     | mean x: 1773294195.5
[2026-03-12 09:06:27] 2026-03-12 08:05:23,945 | INFO     | mean y: 2496978.257142857
[2026-03-12 09:06:27] 2026-03-12 08:05:23,945 | INFO     | intersect: 6524919808.021038
[2026-03-12 09:06:27] 2026-03-12 08:05:23,946 | INFO     | chi2: 0.7915174336640431
[2026-03-12 09:06:27] 2026-03-12 08:05:23,946 | INFO     | current chi2=0.7915174336640431 (change=6.211945475247284 %)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,946 | INFO     | left removable region: 30
[2026-03-12 09:06:27] 2026-03-12 08:05:23,946 | INFO     | sum of square deviations: 5387301010.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,949 | INFO     | sum of deviations: -7197117817.999999
[2026-03-12 09:06:27] 2026-03-12 08:05:23,949 | INFO     | mean x: 1773294470.0
[2026-03-12 09:06:27] 2026-03-12 08:05:23,949 | INFO     | mean y: 2505330.555984556
[2026-03-12 09:06:27] 2026-03-12 08:05:23,949 | INFO     | intersect: 2371522618.230776
[2026-03-12 09:06:27] 2026-03-12 08:05:23,950 | INFO     | chi2: 0.005450820933592246
[2026-03-12 09:06:27] 2026-03-12 08:05:23,950 | INFO     | current memory leak: -1.34 B/s (using 259 data points, chi2=0.01)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,951 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-03-12 09:06:27] 2026-03-12 08:05:23,951 | INFO     | ..............................
[2026-03-12 09:06:27] 2026-03-12 08:05:23,951 | INFO     | . Timing measurements:
[2026-03-12 09:06:27] 2026-03-12 08:05:23,951 | INFO     | . get job = 0 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,951 | INFO     | . initial setup = 93 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | . payload setup = 130 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | . stage-in = 0 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | . payload execution = 18062 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | . stage-out = 3 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | . log creation = 1 s
[2026-03-12 09:06:27] 2026-03-12 08:05:23,952 | INFO     | ..............................
[2026-03-12 09:06:27] 2026-03-12 08:05:24,080 | INFO     | 
[2026-03-12 09:06:27] 2026-03-12 08:05:24,080 | INFO     | job summary report
[2026-03-12 09:06:27] 2026-03-12 08:05:24,080 | INFO     | --------------------------------------------------
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | PanDA job id: 7049824376
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | task id: 48967102
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | errors: (none)
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | pilot state: finished 
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | transexitcode: 0
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | exeerrorcode: 0
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | exeerrordiag: 
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | exitcode: 0
[2026-03-12 09:06:27] 2026-03-12 08:05:24,081 | INFO     | exitmsg: OK
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | cpuconsumptiontime: 69291 s
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | nevents: 400
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | neventsw: 0
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | pid: 24855
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | pgrp: 24855
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | corecount: 8
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | event service: False
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | sizes: {0: 2279755, 1: 2279839, 2: 2280300, 13: 2280300, 18196: 2312691, 18197: 2312690, 18201: 2321874, 18204: 2321930, 18205: 2322124}
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | --------------------------------------------------
[2026-03-12 09:06:27] 2026-03-12 08:05:24,082 | INFO     | 
[2026-03-12 09:06:27] 2026-03-12 08:05:24,083 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2026-03-12 09:06:27] 2026-03-12 08:05:24,404 | INFO     | time since job start (18219s) is within the limit (345600.0s)
[2026-03-12 09:06:27] 2026-03-12 08:05:24,476 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,476 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,476 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,476 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,478 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 09:06:27] 2026-03-12 08:05:24,479 | INFO     | job 7049824376 has completed (purged errors)
[2026-03-12 09:06:27] 2026-03-12 08:05:24,479 | INFO     | overall cleanup function is called
[2026-03-12 09:06:27] 2026-03-12 08:05:25,487 | INFO     | --- collectZombieJob: --- 10, [24855]
[2026-03-12 09:06:27] 2026-03-12 08:05:25,487 | INFO     | zombie collector waiting for pid 24855
[2026-03-12 09:06:27] 2026-03-12 08:05:25,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 09:06:27] 2026-03-12 08:05:25,488 | INFO     | collected zombie processes
[2026-03-12 09:06:27] 2026-03-12 08:05:25,488 | INFO     | will attempt to kill all subprocesses of pid=24855
[2026-03-12 09:06:27] 2026-03-12 08:05:25,623 | INFO     | process IDs to be killed: [24855] (in reverse order)
[2026-03-12 09:06:27] 2026-03-12 08:05:26,609 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 09:06:27] 2026-03-12 08:05:26,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 09:06:27] 2026-03-12 08:05:26,612 | INFO     | did not find any defunct processes belonging to 24855
[2026-03-12 09:06:27] 2026-03-12 08:05:26,614 | INFO     | did not find any defunct processes belonging to 24855
[2026-03-12 09:06:27] 2026-03-12 08:05:26,614 | INFO     | ready for new job
[2026-03-12 09:06:27] 2026-03-12 08:05:26,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 09:06:27] 2026-03-12 08:05:26,616 | INFO     | **************************************
[2026-03-12 09:06:27] 2026-03-12 08:05:26,617 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 09:06:27] 2026-03-12 08:05:26,617 | INFO     | **************************************
[2026-03-12 09:06:27] 2026-03-12 08:05:26,617 | INFO     | 
[2026-03-12 09:06:27] 2026-03-12 08:05:26,617 | INFO     | pilot is running in a VM
[2026-03-12 09:06:27] 2026-03-12 08:05:26,617 | INFO     | architecture information:
[2026-03-12 09:06:27] 2026-03-12 08:05:26,632 | INFO     | executing command: cat /etc/os-release
[2026-03-12 09:06:27] 2026-03-12 08:05:26,916 | INFO     | cat /etc/os-release:
[2026-03-12 09:06:27] NAME="CentOS Linux"
[2026-03-12 09:06:27] VERSION="7 (Core)"
[2026-03-12 09:06:27] ID="centos"
[2026-03-12 09:06:27] ID_LIKE="rhel fedora"
[2026-03-12 09:06:27] VERSION_ID="7"
[2026-03-12 09:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 09:06:27] ANSI_COLOR="0;31"
[2026-03-12 09:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 09:06:27] HOME_URL="https://www.centos.org/"
[2026-03-12 09:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 09:06:27] 
[2026-03-12 09:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 09:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 09:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 09:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 09:06:27] 
[2026-03-12 09:06:27] 2026-03-12 08:05:26,917 | INFO     | **************************************
[2026-03-12 09:06:27] 2026-03-12 08:05:27,420 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2026-03-12 09:06:27] 2026-03-12 08:05:27,660 | INFO     | sufficient remaining disk space (497291362304 B)
[2026-03-12 09:06:27] 2026-03-12 08:05:27,660 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 09:06:27] 2026-03-12 08:05:27,660 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 09:06:27] 2026-03-12 08:05:27,660 | INFO     | update_server=False
[2026-03-12 09:06:27] 2026-03-12 08:05:27,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 09:06:27] 2026-03-12 08:05:27,739 | INFO     | all payload control threads have been joined
[2026-03-12 09:06:27] 2026-03-12 08:05:27,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 09:06:27] 2026-03-12 08:05:28,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 09:06:27] 2026-03-12 08:05:28,113 | INFO     | aborting loop
[2026-03-12 09:06:27] 2026-03-12 08:05:28,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 09:06:27] 2026-03-12 08:05:28,549 | INFO     | all data control threads have been joined
[2026-03-12 09:06:27] 2026-03-12 08:05:28,628 | INFO     | all job control threads have been joined
[2026-03-12 09:06:27] 2026-03-12 08:05:28,666 | INFO     | [job] retrieve thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:28,745 | INFO     | [payload] control thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,027 | INFO     | [data] copytool_in thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 09:06:27] 2026-03-12 08:05:29,118 | INFO     | [job] job monitor thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,298 | INFO     | [payload] validate_post thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,311 | INFO     | [payload] failed_post thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,478 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,555 | INFO     | [data] control thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,574 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,615 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,634 | INFO     | [job] control thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,850 | INFO     | [job] validate thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:29,851 | INFO     | [data] copytool_out thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:30,104 | INFO     | [job] queue monitor thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:32,550 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 09:06:27] 2026-03-12 08:05:57,571 | INFO     | PID=20330 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 09:06:27] 2026-03-12 08:05:57,572 | INFO     | .. there are 9 such processes running
[2026-03-12 09:06:27] 2026-03-12 08:05:57,572 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 09:06:27] 2026-03-12 08:05:57,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 09:06:27] 2026-03-12 08:05:57,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 09:06:27] 2026-03-12 08:06:16,417 | INFO     | [monitor] cgroup control has ended
[2026-03-12 09:06:27] 2026-03-12 08:06:17,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496448313152)>', '<ExcThread(monitor, started 140495980304128)>']
[2026-03-12 09:06:27] 2026-03-12 08:06:18,699 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 09:06:27] 2026-03-12 08:06:18,699 | INFO     | [monitor] control thread has ended
[2026-03-12 09:06:27] 2026-03-12 08:06:22,951 | INFO     | all workflow threads have been joined
[2026-03-12 09:06:27] 2026-03-12 08:06:22,951 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 09:06:27] 2026-03-12 08:06:22,952 | INFO     | traces error code: 0
[2026-03-12 09:06:27] 2026-03-12 08:06:22,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 09:06:27] 2026-03-12 08:06:23,240 [wrapper] ==== pilot stdout END ====
[2026-03-12 09:06:27] 2026-03-12 08:06:23,316 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 09:06:27] 2026-03-12 08:06:23,358 [wrapper] pilotpid: 20330
[2026-03-12 09:06:27] 2026-03-12 08:06:23,454 [wrapper] Pilot exit status: 0
[2026-03-12 09:06:27] 2026-03-12 08:06:23,793 [wrapper] pandaids: 7049824376
[2026-03-12 09:06:27] 2026-03-12 08:06:24,512 [wrapper] cleanup supervisor_pilot 17167 20331
[2026-03-12 09:06:27] 2026-03-12 08:06:24,597 [wrapper] Test setup, not cleaning
[2026-03-12 09:06:27] 2026-03-12 08:06:24,660 [wrapper] apfmon messages muted
[2026-03-12 09:06:27] 2026-03-12 08:06:24,733 [wrapper] ==== wrapper stdout END ====
[2026-03-12 09:06:27] 2026-03-12 08:06:24,832 [wrapper] ==== wrapper stderr END ====
[2026-03-12 09:06:27]  *** Error codes and diagnostics ***
[2026-03-12 09:06:27]     "exeErrorCode": 0,
[2026-03-12 09:06:27]     "exeErrorDiag": "",
[2026-03-12 09:06:27]     "pilotErrorCode": 0,
[2026-03-12 09:06:27]     "pilotErrorDiag": "",
[2026-03-12 09:06:27]  *** Listing of results directory ***
[2026-03-12 09:06:27] total 417760
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc    585013 Mar 11 13:53 pilot3.tar.gz
[2026-03-12 09:06:27] -rwx------. 1 boinc boinc     36322 Mar 11 13:54 runpilot2-wrapper.sh
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc      5111 Mar 11 13:55 queuedata.json
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc       100 Mar 12 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 09:06:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 03:56 run_atlas
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc       105 Mar 12 03:56 job.xml
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc 216222849 Mar 12 03:56 EVNT.48967100._000002.pool.root.1
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc      6392 Mar 12 03:56 init_data.xml
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc     15845 Mar 12 03:56 start_atlas.sh
[2026-03-12 09:06:27] drwxrwx--x. 2 boinc boinc        68 Mar 12 03:56 shared
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc    597512 Mar 12 03:56 input.tar.gz
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc         0 Mar 12 03:56 boinc_lockfile
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc      2572 Mar 12 03:56 pandaJob.out
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc       415 Mar 12 04:01 workernode_map.json
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc   1006235 Mar 12 04:01 agis_schedconf.cvmfs.json
[2026-03-12 09:06:27] drwx------. 5 boinc boinc      4096 Mar 12 04:01 pilot3
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc 201518476 Mar 12 09:03 HITS.48967102._000048.pool.root.1
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc       530 Mar 12 09:04 boinc_task_state.xml
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc      1029 Mar 12 09:05 memory_monitor_summary.json
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc        95 Mar 12 09:05 pilot_heartbeat.json
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc   1511578 Mar 12 09:05 agis_ddmendpoints.agis.ALL.json
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc    527839 Mar 12 09:05 log.48967102._000048.job.log.tgz.1
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc      6314 Mar 12 09:05 heartbeat.json
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc      8192 Mar 12 09:05 boinc_mmap_file
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc        28 Mar 12 09:05 wrapper_checkpoint.txt
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc      4881 Mar 12 09:06 pilotlog.txt
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc   2533424 Mar 12 09:06 log.48967102._000048.job.log.1
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc       357 Mar 12 09:06 output.list
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc       620 Mar 12 09:06 runtime_log
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc   3082240 Mar 12 09:06 result.tar.gz
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc      8832 Mar 12 09:06 runtime_log.err
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc       656 Mar 12 09:06 fdZKDmXGYK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKkjLDmefpRkm.diag
[2026-03-12 09:06:27] -rw-r--r--. 1 boinc boinc     20756 Mar 12 09:06 stderr.txt
[2026-03-12 09:06:27] HITS file was successfully produced:
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc 201518476 Mar 12 09:03 shared/HITS.pool.root.1
[2026-03-12 09:06:27]  *** Contents of shared directory: ***
[2026-03-12 09:06:27] total 411564
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc 216222849 Mar 12 03:56 ATLAS.root_0
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc     15845 Mar 12 03:56 start_atlas.sh
[2026-03-12 09:06:27] -rw-r--r--. 2 boinc boinc    597512 Mar 12 03:56 input.tar.gz
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc 201518476 Mar 12 09:03 HITS.pool.root.1
[2026-03-12 09:06:27] -rw-------. 1 boinc boinc   3082240 Mar 12 09:06 result.tar.gz
09:06:29 (16262): run_atlas exited; CPU time 69573.232032
09:06:29 (16262): called boinc_finish(0)

</stderr_txt>
]]>

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