Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:20:08 (3865867): wrapper (7.7.26015): starting
07:20:08 (3865867): wrapper: running run_atlas (--nthreads 12)
[2026-03-15 07:20:08] Arguments: --nthreads 12
[2026-03-15 07:20:08] Threads: 12
[2026-03-15 07:20:08] Checking for CVMFS
[2026-03-15 07:20:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-15 07:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-15 07:20:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-15 07:20:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-15 07:20:09] 2.13.3.0 3534869 1469 73112 157306 0 188 2391841 4096000 17222 130560 0 9250066 99.999 53070 4993 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-15 07:20:09] CVMFS is ok
[2026-03-15 07:20:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-15 07:20:09] Checking for apptainer binary...
[2026-03-15 07:20:09] apptainer is not installed, using version from CVMFS
[2026-03-15 07:20:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-15 07:20:10] epyc7v12
[2026-03-15 07:20:10] apptainer works
[2026-03-15 07:20:10] Set ATHENA_PROC_NUMBER=12
[2026-03-15 07:20:10] Set ATHENA_CORE_NUMBER=12
[2026-03-15 07:20:10] Starting ATLAS job with PandaID=7036245568
[2026-03-15 07:20:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-15 14:36:47]  *** The last 200 lines of the pilot log: ***
[2026-03-15 14:36:47] 2026-03-15 14:36:13,320 | INFO     | sum of square deviations: 23469135852.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,325 | INFO     | sum of deviations: 188335497065.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,328 | INFO     | mean x: 1773572148.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,328 | INFO     | mean y: 2647057.550827423
[2026-03-15 14:36:47] 2026-03-15 14:36:13,328 | INFO     | intersect: -14229943106.000278
[2026-03-15 14:36:47] 2026-03-15 14:36:13,329 | INFO     | chi2: 2.1357883879282613
[2026-03-15 14:36:47] 2026-03-15 14:36:13,329 | INFO     | current chi2=2.1357883879282613 (change=29.11725525853261 %)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,330 | INFO     | sum of square deviations: 22646692524.5
[2026-03-15 14:36:47] 2026-03-15 14:36:13,335 | INFO     | sum of deviations: 185834350146.5001
[2026-03-15 14:36:47] 2026-03-15 14:36:13,337 | INFO     | mean x: 1773571995.5
[2026-03-15 14:36:47] 2026-03-15 14:36:13,337 | INFO     | mean y: 2646593.748803828
[2026-03-15 14:36:47] 2026-03-15 14:36:13,337 | INFO     | intersect: -14550939933.962076
[2026-03-15 14:36:47] 2026-03-15 14:36:13,338 | INFO     | chi2: 2.1349105365026704
[2026-03-15 14:36:47] 2026-03-15 14:36:13,338 | INFO     | current chi2=2.1349105365026704 (change=0.041101985128894826 %)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,338 | INFO     | right removable region: 417
[2026-03-15 14:36:47] 2026-03-15 14:36:13,339 | INFO     | sum of square deviations: 23469135852.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,348 | INFO     | sum of deviations: 67242216619.99999
[2026-03-15 14:36:47] 2026-03-15 14:36:13,348 | WARNING  | process 3875031 can no longer be monitored (due to stat problems) - aborting
[2026-03-15 14:36:47] 2026-03-15 14:36:13,349 | INFO     | mean x: 1773572453.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,349 | INFO     | mean y: 2657996.418439716
[2026-03-15 14:36:47] 2026-03-15 14:36:13,349 | INFO     | intersect: -5078864554.218111
[2026-03-15 14:36:47] 2026-03-15 14:36:13,350 | INFO     | chi2: 1.249210136187212
[2026-03-15 14:36:47] 2026-03-15 14:36:13,349 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7036245568/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,351 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7036245568/memory_monitor_summary.json (trf name=prmon)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,351 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-15 14:36:47] 2026-03-15 14:36:13,351 | WARNING  | maxPSS not found in memory monitor output
[2026-03-15 14:36:47] 2026-03-15 14:36:13,352 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4037041 B
[2026-03-15 14:36:47] 2026-03-15 14:36:13,352 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16349 B
[2026-03-15 14:36:47] 2026-03-15 14:36:13,352 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,350 | INFO     | current chi2=1.249210136187212 (change=58.54109718346025 %)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,361 | INFO     | sum of square deviations: 22646692524.5
[2026-03-15 14:36:47] 2026-03-15 14:36:13,368 | INFO     | sum of deviations: 36416922621.5
[2026-03-15 14:36:47] 2026-03-15 14:36:13,368 | INFO     | mean x: 1773572605.5
[2026-03-15 14:36:47] 2026-03-15 14:36:13,368 | INFO     | mean y: 2663710.7918660287
[2026-03-15 14:36:47] 2026-03-15 14:36:13,368 | INFO     | intersect: -2849322567.921107
[2026-03-15 14:36:47] 2026-03-15 14:36:13,369 | INFO     | chi2: 1.104313008335209
[2026-03-15 14:36:47] 2026-03-15 14:36:13,369 | INFO     | current chi2=1.104313008335209 (change=11.599099595385297 %)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,369 | INFO     | left removable region: 20
[2026-03-15 14:36:47] 2026-03-15 14:36:13,370 | INFO     | sum of square deviations: 19402030758.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,374 | INFO     | sum of deviations: 20852621189.000004
[2026-03-15 14:36:47] 2026-03-15 14:36:13,374 | INFO     | mean x: 1773572575.0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,375 | INFO     | mean y: 2678469.717884131
[2026-03-15 14:36:47] 2026-03-15 14:36:13,375 | INFO     | intersect: -1903495039.5898936
[2026-03-15 14:36:47] 2026-03-15 14:36:13,375 | INFO     | chi2: 0.004215398515321037
[2026-03-15 14:36:47] 2026-03-15 14:36:13,376 | INFO     | current memory leak: 1.07 B/s (using 397 data points, chi2=0.00)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,376 | INFO     | could have reported an average CPU frequency of 2388 MHz (18 samples)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | ..............................
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . Timing measurements:
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . get job = 0 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . initial setup = 14 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . payload setup = 14 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . stage-in = 0 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . payload execution = 26099 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . stage-out = 2 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | . log creation = 0 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,377 | INFO     | ..............................
[2026-03-15 14:36:47] 2026-03-15 14:36:13,397 | INFO     | sufficient remaining disk space (168182153216 B)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,397 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,405 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7036245568: 4471181 B (within 5033164800 B limit)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,405 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7036245568/HITS.48850139._000034.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,406 | INFO     | total size of present files: 0 B (workdir size: 4471181 B)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,406 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-7036245568/HITS.48850139._000034.pool.root.1 since it does n
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | 
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | job summary report
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | --------------------------------------------------
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | PanDA job id: 7036245568
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | task id: 48850139
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | errors: (none)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | pilot state: finished 
[2026-03-15 14:36:47] 2026-03-15 14:36:13,596 | INFO     | transexitcode: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | exeerrorcode: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | exeerrordiag: 
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | exitcode: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | exitmsg: OK
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | cpuconsumptiontime: 174180 s
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | nevents: 400
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | neventsw: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | pid: 3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | pgrp: 3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | corecount: 12
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | event service: False
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | sizes: {0: 2279953, 1: 2280414, 2: 2280414, 26118: 2317457, 26120: 2326501, 26121: 2326557, 26122: 2326907}
[2026-03-15 14:36:47] 2026-03-15 14:36:13,597 | INFO     | --------------------------------------------------
[2026-03-15 14:36:47] 2026-03-15 14:36:13,598 | INFO     | 
[2026-03-15 14:36:47] 2026-03-15 14:36:13,598 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-03-15 14:36:47] 2026-03-15 14:36:13,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,651 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-15 14:36:47] 2026-03-15 14:36:13,653 | INFO     | job 7036245568 has completed (purged errors)
[2026-03-15 14:36:47] 2026-03-15 14:36:13,653 | INFO     | overall cleanup function is called
[2026-03-15 14:36:47] 2026-03-15 14:36:14,678 | INFO     | --- collectZombieJob: --- 10, [3875031]
[2026-03-15 14:36:47] 2026-03-15 14:36:14,678 | INFO     | zombie collector waiting for pid 3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:14,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-15 14:36:47] 2026-03-15 14:36:14,678 | INFO     | collected zombie processes
[2026-03-15 14:36:47] 2026-03-15 14:36:14,679 | INFO     | will attempt to kill all subprocesses of pid=3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:14,764 | INFO     | number of running child processes to parent process 3875031: 1
[2026-03-15 14:36:47] 2026-03-15 14:36:14,765 | INFO     | maximum number of monitored processes: 6
[2026-03-15 14:36:47] 2026-03-15 14:36:14,765 | INFO     | aborting job monitoring since job object (job id=7036245568) has expired
[2026-03-15 14:36:47] 2026-03-15 14:36:15,428 | INFO     | process IDs to be killed: [3875031] (in reverse order)
[2026-03-15 14:36:47] 2026-03-15 14:36:15,684 | WARNING  | found no corresponding commands to process id(s)
[2026-03-15 14:36:47] 2026-03-15 14:36:15,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-15 14:36:47] 2026-03-15 14:36:15,702 | INFO     | did not find any defunct processes belonging to 3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:15,719 | INFO     | did not find any defunct processes belonging to 3875031
[2026-03-15 14:36:47] 2026-03-15 14:36:15,719 | INFO     | ready for new job
[2026-03-15 14:36:47] 2026-03-15 14:36:15,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-15 14:36:47] 2026-03-15 14:36:15,723 | INFO     | **************************************
[2026-03-15 14:36:47] 2026-03-15 14:36:15,723 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-15 14:36:47] 2026-03-15 14:36:15,723 | INFO     | **************************************
[2026-03-15 14:36:47] 2026-03-15 14:36:15,723 | INFO     | 
[2026-03-15 14:36:47] 2026-03-15 14:36:15,733 | INFO     | architecture information:
[2026-03-15 14:36:47] 2026-03-15 14:36:15,733 | INFO     | executing command: cat /etc/os-release
[2026-03-15 14:36:47] 2026-03-15 14:36:15,756 | INFO     | cat /etc/os-release:
[2026-03-15 14:36:47] NAME="CentOS Linux"
[2026-03-15 14:36:47] VERSION="7 (Core)"
[2026-03-15 14:36:47] ID="centos"
[2026-03-15 14:36:47] ID_LIKE="rhel fedora"
[2026-03-15 14:36:47] VERSION_ID="7"
[2026-03-15 14:36:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-15 14:36:47] ANSI_COLOR="0;31"
[2026-03-15 14:36:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-15 14:36:47] HOME_URL="https://www.centos.org/"
[2026-03-15 14:36:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-15 14:36:47] 
[2026-03-15 14:36:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-15 14:36:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-15 14:36:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-15 14:36:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-15 14:36:47] 
[2026-03-15 14:36:47] 2026-03-15 14:36:15,757 | INFO     | **************************************
[2026-03-15 14:36:47] 2026-03-15 14:36:16,261 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-03-15 14:36:47] 2026-03-15 14:36:16,307 | INFO     | sufficient remaining disk space (168187396096 B)
[2026-03-15 14:36:47] 2026-03-15 14:36:16,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-15 14:36:47] 2026-03-15 14:36:16,309 | INFO     | current server update state: UPDATING_FINAL
[2026-03-15 14:36:47] 2026-03-15 14:36:16,309 | INFO     | update_server=False
[2026-03-15 14:36:47] 2026-03-15 14:36:16,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-15 14:36:47] 2026-03-15 14:36:16,310 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:36:47] 2026-03-15 14:36:16,310 | INFO     | aborting loop
[2026-03-15 14:36:47] 2026-03-15 14:36:16,351 | INFO     | all data control threads have been joined
[2026-03-15 14:36:47] 2026-03-15 14:36:16,667 | INFO     | all job control threads have been joined
[2026-03-15 14:36:47] 2026-03-15 14:36:16,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-15 14:36:47] 2026-03-15 14:36:17,315 | INFO     | [job] job monitor thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:17,316 | INFO     | [job] retrieve thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:17,358 | INFO     | [data] control thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:17,481 | INFO     | all payload control threads have been joined
[2026-03-15 14:36:47] 2026-03-15 14:36:17,673 | INFO     | [job] control thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:17,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-15 14:36:47] 2026-03-15 14:36:18,150 | INFO     | [payload] validate_post thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,228 | INFO     | [job] validate thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,294 | INFO     | [payload] validate_pre thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,417 | INFO     | [job] create_data_payload thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,486 | INFO     | [payload] control thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,569 | INFO     | [data] copytool_in thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-15 14:36:47] 2026-03-15 14:36:18,740 | INFO     | [payload] execute_payloads thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,808 | INFO     | [payload] failed_post thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:18,932 | INFO     | [data] copytool_out thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:19,639 | INFO     | [job] queue monitor thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:21,907 | INFO     | [data] queue_monitor thread has finished
[2026-03-15 14:36:47] 2026-03-15 14:36:32,099 | INFO     | [monitor] cgroup control has ended
[2026-03-15 14:36:47] 2026-03-15 14:36:33,121 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131732519982912)>', '<ExcThread(monitor, started 131731965318912)>']
[2026-03-15 14:36:47] 2026-03-15 14:36:38,146 | INFO     | all workflow threads have been joined
[2026-03-15 14:36:47] 2026-03-15 14:36:38,146 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-15 14:36:47] 2026-03-15 14:36:38,147 | INFO     | traces error code: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:38,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-15 14:36:47] 2026-03-15 14:36:46,628 | INFO     | PID=3870065 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | INFO     | .. there are 20 such processes running
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | INFO     | found 0 job(s) in 20 queues
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-15 14:36:47] 2026-03-15 14:36:46,629 | INFO     | [monitor] control thread has ended
[2026-03-15 14:36:47] 2026-03-15 14:36:46,795 [wrapper] ==== pilot stdout END ====
[2026-03-15 14:36:47] 2026-03-15 14:36:46,804 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-15 14:36:47] 2026-03-15 14:36:46,815 [wrapper] pilotpid: 3870065
[2026-03-15 14:36:47] 2026-03-15 14:36:46,823 [wrapper] Pilot exit status: 0
[2026-03-15 14:36:47] 2026-03-15 14:36:46,853 [wrapper] pandaids: 7036245568
[2026-03-15 14:36:47] 2026-03-15 14:36:47,014 [wrapper] cleanup supervisor_pilot  417964 3870066
[2026-03-15 14:36:47] 2026-03-15 14:36:47,024 [wrapper] Test setup, not cleaning
[2026-03-15 14:36:47] 2026-03-15 14:36:47,032 [wrapper] apfmon messages muted
[2026-03-15 14:36:47] 2026-03-15 14:36:47,044 [wrapper] ==== wrapper stdout END ====
[2026-03-15 14:36:47] 2026-03-15 14:36:47,051 [wrapper] ==== wrapper stderr END ====
[2026-03-15 14:36:47]  *** Error codes and diagnostics ***
[2026-03-15 14:36:47]     "exeErrorCode": 0,
[2026-03-15 14:36:47]     "exeErrorDiag": "",
[2026-03-15 14:36:47]     "pilotErrorCode": 0,
[2026-03-15 14:36:47]     "pilotErrorDiag": "",
[2026-03-15 14:36:47]  *** Listing of results directory ***
[2026-03-15 14:36:47] total 489628
[2026-03-15 14:36:47] -rw-r--r-- 1 boinc boinc    584627 Mar  3 08:25 pilot3.tar.gz
[2026-03-15 14:36:47] -rwx------ 1 boinc boinc     36322 Mar  3 09:04 runpilot2-wrapper.sh
[2026-03-15 14:36:47] -rw-r--r-- 1 boinc boinc      5111 Mar  3 09:06 queuedata.json
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc       100 Mar 15 07:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-15 14:36:47] -rwxr-xr-x 1 boinc boinc      7986 Mar 15 07:20 run_atlas
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc       105 Mar 15 07:20 job.xml
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc 222641555 Mar 15 07:20 EVNT.48458305._000002.pool.root.1
[2026-03-15 14:36:47] drwxrwx--x 2 boinc boinc      4096 Mar 15 07:20 shared
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc    597988 Mar 15 07:20 input.tar.gz
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc     15845 Mar 15 07:20 start_atlas.sh
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc      7050 Mar 15 07:20 init_data.xml
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc         0 Mar 15 07:20 boinc_setup_complete
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc         0 Mar 15 07:20 boinc_lockfile
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc      2676 Mar 15 07:20 pandaJob.out
[2026-03-15 14:36:47] -rw------- 1 boinc boinc   1006481 Mar 15 07:20 agis_schedconf.cvmfs.json
[2026-03-15 14:36:47] -rw------- 1 boinc boinc       420 Mar 15 07:20 workernode_map.json
[2026-03-15 14:36:47] drwx------ 5 boinc boinc      4096 Mar 15 07:20 pilot3
[2026-03-15 14:36:47] -rw------- 1 boinc boinc 266287595 Mar 15 14:35 HITS.48850139._000034.pool.root.1
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc       531 Mar 15 14:35 boinc_task_state.xml
[2026-03-15 14:36:47] -rw------- 1 boinc boinc        95 Mar 15 14:36 pilot_heartbeat.json
[2026-03-15 14:36:47] -rw------- 1 boinc boinc      1026 Mar 15 14:36 memory_monitor_summary.json
[2026-03-15 14:36:47] -rw------- 1 boinc boinc   1511579 Mar 15 14:36 agis_ddmendpoints.agis.ALL.json
[2026-03-15 14:36:47] -rw------- 1 boinc boinc    678733 Mar 15 14:36 log.48850139._000034.job.log.tgz.1
[2026-03-15 14:36:47] -rw------- 1 boinc boinc      6277 Mar 15 14:36 heartbeat.json
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc      8192 Mar 15 14:36 boinc_mmap_file
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc        29 Mar 15 14:36 wrapper_checkpoint.txt
[2026-03-15 14:36:47] -rw------- 1 boinc boinc       824 Mar 15 14:36 pilotlog.txt
[2026-03-15 14:36:47] -rw------- 1 boinc boinc   3579592 Mar 15 14:36 log.48850139._000034.job.log.1
[2026-03-15 14:36:47] -rw------- 1 boinc boinc       357 Mar 15 14:36 output.list
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc       620 Mar 15 14:36 runtime_log
[2026-03-15 14:36:47] -rw------- 1 boinc boinc   4280320 Mar 15 14:36 result.tar.gz
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc      9167 Mar 15 14:36 runtime_log.err
[2026-03-15 14:36:47] -rw------- 1 boinc boinc       658 Mar 15 14:36 Q1gNDmUraH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWDELDmfCDsen.diag
[2026-03-15 14:36:47] -rw-rw-r-- 1 boinc boinc     21648 Mar 15 14:36 stderr.txt
[2026-03-15 14:36:47] HITS file was successfully produced:
[2026-03-15 14:36:47] -rw------- 1 boinc boinc 266287595 Mar 15 14:35 shared/HITS.pool.root.1
[2026-03-15 14:36:47]  *** Contents of shared directory: ***
[2026-03-15 14:36:47] total 482260
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc 222641555 Mar 15 07:20 ATLAS.root_0
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc    597988 Mar 15 07:20 input.tar.gz
[2026-03-15 14:36:47] -rw-r--r-- 2 boinc boinc     15845 Mar 15 07:20 start_atlas.sh
[2026-03-15 14:36:47] -rw------- 1 boinc boinc 266287595 Mar 15 14:35 HITS.pool.root.1
[2026-03-15 14:36:47] -rw------- 1 boinc boinc   4280320 Mar 15 14:36 result.tar.gz
14:36:48 (3865867): run_atlas exited; CPU time 175828.076111
14:36:48 (3865867): called boinc_finish(0)

</stderr_txt>
]]>

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