Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:41:30 (3446792): wrapper (7.7.26015): starting
07:41:30 (3446792): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 07:41:30] Arguments: --nthreads 4
[2026-03-13 07:41:30] Threads: 4
[2026-03-13 07:41:30] Checking for CVMFS
[2026-03-13 07:41:30] No cvmfs_config command found, will try listing directly
[2026-03-13 07:41:30] CVMFS is ok
[2026-03-13 07:41:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 07:41:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 07:41:30] Further information can be found at the LHC@home message board.
[2026-03-13 07:41:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:41:30] Checking for apptainer binary...
[2026-03-13 07:41:30] which: no apptainer in ((null))
[2026-03-13 07:41:30] apptainer is not installed, using version from CVMFS
[2026-03-13 07:41:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:41:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-13 07:41:30] apptainer works
[2026-03-13 07:41:30] Set ATHENA_PROC_NUMBER=4
[2026-03-13 07:41:30] Set ATHENA_CORE_NUMBER=4
[2026-03-13 07:41:30] Starting ATLAS job with PandaID=7049784716
[2026-03-13 07:41:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 12:11:06]  *** The last 200 lines of the pilot log: ***
[2026-03-13 12:11:06] 2026-03-13 10:54:39,223 | INFO     | log transfer has been attempted: DONE
[2026-03-13 12:11:06] 2026-03-13 10:54:39,223 | INFO     | job 7049784716 has finished - writing final server update
[2026-03-13 12:11:06] 2026-03-13 10:54:39,223 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_714829/.job.ad'
[2026-03-13 12:11:06] 2026-03-13 10:54:39,223 | INFO     | total number of processed events: 400 (read)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,235 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049784716/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,235 | INFO     | extracted standard info from prmon json
[2026-03-13 12:11:06] 2026-03-13 10:54:39,235 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 12:11:06] 2026-03-13 10:54:39,236 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 12:11:06] 2026-03-13 10:54:39,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 12:11:06] 2026-03-13 10:54:39,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 12:11:06] 2026-03-13 10:54:39,240 | INFO     | fitting pss+swap vs Time
[2026-03-13 12:11:06] 2026-03-13 10:54:39,241 | INFO     | sum of square deviations: 4787066500.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,242 | INFO     | sum of deviations: 22489926215.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,243 | INFO     | mean x: 1773391693.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,243 | INFO     | mean y: 2311009.698795181
[2026-03-13 12:11:06] 2026-03-13 10:54:39,243 | INFO     | intersect: -8329189780.161536
[2026-03-13 12:11:06] 2026-03-13 10:54:39,243 | INFO     | chi2: 2.152767597513743
[2026-03-13 12:11:06] 2026-03-13 10:54:39,244 | INFO     | sum of square deviations: 4504437945.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,245 | INFO     | sum of deviations: 37445603533.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,245 | INFO     | mean x: 1773391540.5
[2026-03-13 12:11:06] 2026-03-13 10:54:39,245 | INFO     | mean y: 2318941.950819672
[2026-03-13 12:11:06] 2026-03-13 10:54:39,245 | INFO     | intersect: -14739967963.799664
[2026-03-13 12:11:06] 2026-03-13 10:54:39,246 | INFO     | chi2: 1.3525443167450397
[2026-03-13 12:11:06] 2026-03-13 10:54:39,246 | INFO     | current chi2=1.3525443167450397 (change=37.17183785620383 %)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,246 | INFO     | sum of square deviations: 4233158440.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,248 | INFO     | sum of deviations: 36495515296.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,248 | INFO     | mean x: 1773391388.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,248 | INFO     | mean y: 2318407.661087866
[2026-03-13 12:11:06] 2026-03-13 10:54:39,248 | INFO     | intersect: -15286698869.6012
[2026-03-13 12:11:06] 2026-03-13 10:54:39,248 | INFO     | chi2: 1.35298057026888
[2026-03-13 12:11:06] 2026-03-13 10:54:39,249 | INFO     | current chi2=1.35298057026888 (change=-0.03225428686064134 %)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,249 | INFO     | right removable region: 238
[2026-03-13 12:11:06] 2026-03-13 10:54:39,249 | INFO     | sum of square deviations: 4504437945.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,250 | INFO     | sum of deviations: -10767902481.5
[2026-03-13 12:11:06] 2026-03-13 10:54:39,251 | INFO     | mean x: 1773391845.5
[2026-03-13 12:11:06] 2026-03-13 10:54:39,251 | INFO     | mean y: 2328782.9139344264
[2026-03-13 12:11:06] 2026-03-13 10:54:39,251 | INFO     | intersect: 4241639144.6046457
[2026-03-13 12:11:06] 2026-03-13 10:54:39,251 | INFO     | chi2: 0.8230449783113747
[2026-03-13 12:11:06] 2026-03-13 10:54:39,251 | INFO     | current chi2=0.8230449783113747 (change=61.76805247060021 %)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,252 | INFO     | sum of square deviations: 4233158440.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,253 | INFO     | sum of deviations: -11550371350.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,253 | INFO     | mean x: 1773391998.0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,253 | INFO     | mean y: 2329212.3472803347
[2026-03-13 12:11:06] 2026-03-13 10:54:39,253 | INFO     | intersect: 4841112455.7211
[2026-03-13 12:11:06] 2026-03-13 10:54:39,254 | INFO     | chi2: 0.8200756757108628
[2026-03-13 12:11:06] 2026-03-13 10:54:39,254 | INFO     | current chi2=0.8200756757108628 (change=0.36077039271947564 %)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,254 | INFO     | left removable region: 20
[2026-03-13 12:11:06] 2026-03-13 10:54:39,254 | INFO     | sum of square deviations: 3212467674.5
[2026-03-13 12:11:06] 2026-03-13 10:54:39,256 | INFO     | sum of deviations: 4849781423.499998
[2026-03-13 12:11:06] 2026-03-13 10:54:39,256 | INFO     | mean x: 1773391967.5
[2026-03-13 12:11:06] 2026-03-13 10:54:39,256 | INFO     | mean y: 2336596.8853211007
[2026-03-13 12:11:06] 2026-03-13 10:54:39,256 | INFO     | intersect: -2674908528.049433
[2026-03-13 12:11:06] 2026-03-13 10:54:39,256 | INFO     | chi2: 0.0016021010831677191
[2026-03-13 12:11:06] 2026-03-13 10:54:39,257 | INFO     | current memory leak: 1.51 B/s (using 218 data points, chi2=0.00)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,257 | INFO     | could have reported an average CPU frequency of 2594 MHz (12 samples)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,257 | INFO     | ..............................
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . Timing measurements:
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . get job = 0 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . initial setup = 5 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . payload setup = 6 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . stage-in = 0 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . payload execution = 15147 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . stage-out = 1 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | . log creation = 0 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,258 | INFO     | ..............................
[2026-03-13 12:11:06] 2026-03-13 10:54:39,810 | INFO     | 
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | job summary report
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | --------------------------------------------------
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | PanDA job id: 7049784716
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | task id: 48967011
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | errors: (none)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | pilot state: finished 
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | transexitcode: 0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | exeerrorcode: 0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | exeerrordiag: 
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | exitcode: 0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,811 | INFO     | exitmsg: OK
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | cpuconsumptiontime: 54020 s
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | nevents: 400
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | neventsw: 0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | pid: 3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | pgrp: 3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | corecount: 4
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | event service: False
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | sizes: {0: 2279991, 1: 2280281, 11: 2280281, 15157: 2311792, 15159: 2320812, 15161: 2320896, 15162: 2321218}
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | --------------------------------------------------
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | 
[2026-03-13 12:11:06] 2026-03-13 10:54:39,812 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-13 12:11:06] 2026-03-13 10:54:39,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 12:11:06] 2026-03-13 10:54:39,834 | INFO     | job 7049784716 has completed (purged errors)
[2026-03-13 12:11:06] 2026-03-13 10:54:39,835 | INFO     | overall cleanup function is called
[2026-03-13 12:11:06] 2026-03-13 10:54:40,838 | INFO     | --- collectZombieJob: --- 10, [3455395]
[2026-03-13 12:11:06] 2026-03-13 10:54:40,838 | INFO     | zombie collector waiting for pid 3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:40,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 12:11:06] 2026-03-13 10:54:40,838 | INFO     | collected zombie processes
[2026-03-13 12:11:06] 2026-03-13 10:54:40,838 | INFO     | will attempt to kill all subprocesses of pid=3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:41,219 | INFO     | process IDs to be killed: [3455395] (in reverse order)
[2026-03-13 12:11:06] 2026-03-13 10:54:41,343 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 12:11:06] 2026-03-13 10:54:41,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 12:11:06] 2026-03-13 10:54:41,356 | INFO     | did not find any defunct processes belonging to 3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:41,367 | INFO     | did not find any defunct processes belonging to 3455395
[2026-03-13 12:11:06] 2026-03-13 10:54:41,368 | INFO     | ready for new job
[2026-03-13 12:11:06] 2026-03-13 10:54:41,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 12:11:06] 2026-03-13 10:54:41,370 | INFO     | **************************************
[2026-03-13 12:11:06] 2026-03-13 10:54:41,370 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 12:11:06] 2026-03-13 10:54:41,370 | INFO     | **************************************
[2026-03-13 12:11:06] 2026-03-13 10:54:41,370 | INFO     | 
[2026-03-13 12:11:06] 2026-03-13 10:54:41,374 | INFO     | architecture information:
[2026-03-13 12:11:06] 2026-03-13 10:54:41,374 | INFO     | executing command: cat /etc/os-release
[2026-03-13 12:11:06] 2026-03-13 10:54:41,390 | INFO     | cat /etc/os-release:
[2026-03-13 12:11:06] NAME="CentOS Linux"
[2026-03-13 12:11:06] VERSION="7 (Core)"
[2026-03-13 12:11:06] ID="centos"
[2026-03-13 12:11:06] ID_LIKE="rhel fedora"
[2026-03-13 12:11:06] VERSION_ID="7"
[2026-03-13 12:11:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 12:11:06] ANSI_COLOR="0;31"
[2026-03-13 12:11:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 12:11:06] HOME_URL="https://www.centos.org/"
[2026-03-13 12:11:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 12:11:06] 
[2026-03-13 12:11:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 12:11:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 12:11:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 12:11:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 12:11:06] 
[2026-03-13 12:11:06] 2026-03-13 10:54:41,390 | INFO     | **************************************
[2026-03-13 12:11:06] 2026-03-13 10:54:41,893 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-13 12:11:06] 2026-03-13 10:54:41,909 | INFO     | sufficient remaining disk space (20980957184 B)
[2026-03-13 12:11:06] 2026-03-13 10:54:41,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 12:11:06] 2026-03-13 10:54:41,910 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 12:11:06] 2026-03-13 10:54:41,910 | INFO     | update_server=False
[2026-03-13 12:11:06] 2026-03-13 10:54:41,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 12:11:06] 2026-03-13 10:54:41,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 12:11:06] 2026-03-13 10:54:42,055 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:11:06] 2026-03-13 10:54:42,056 | INFO     | aborting loop
[2026-03-13 12:11:06] 2026-03-13 10:54:42,167 | INFO     | all job control threads have been joined
[2026-03-13 12:11:06] 2026-03-13 10:54:42,661 | INFO     | all data control threads have been joined
[2026-03-13 12:11:06] 2026-03-13 10:54:42,685 | INFO     | all payload control threads have been joined
[2026-03-13 12:11:06] 2026-03-13 10:54:42,911 | INFO     | [job] retrieve thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,004 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,009 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,060 | INFO     | [job] job monitor thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,172 | INFO     | [job] control thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,188 | INFO     | [data] copytool_in thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,533 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,606 | INFO     | [payload] validate_post thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,653 | INFO     | [payload] failed_post thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,665 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,666 | INFO     | [data] control thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,689 | INFO     | [payload] control thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:43,915 | INFO     | [data] copytool_out thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:44,305 | INFO     | [job] validate thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:44,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 12:11:06] 2026-03-13 10:54:44,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 12:11:06] 2026-03-13 10:54:45,363 | INFO     | [job] queue monitor thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:54:48,451 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 12:11:06] 2026-03-13 10:55:11,103 | INFO     | [monitor] cgroup control has ended
[2026-03-13 12:11:06] 2026-03-13 10:55:11,681 | INFO     | PID=3450570 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 12:11:06] 2026-03-13 10:55:11,681 | INFO     | .. there are 11 such processes running
[2026-03-13 12:11:06] 2026-03-13 10:55:11,681 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 12:11:06] 2026-03-13 10:55:11,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 12:11:06] 2026-03-13 10:55:11,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 12:11:06] 2026-03-13 10:55:11,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23125323544384)>', '<ExcThread(monitor, started 23125080413952)>']
[2026-03-13 12:11:06] 2026-03-13 10:55:12,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 12:11:06] 2026-03-13 10:55:12,687 | INFO     | [monitor] control thread has ended
[2026-03-13 12:11:06] 2026-03-13 10:55:16,974 | INFO     | all workflow threads have been joined
[2026-03-13 12:11:06] 2026-03-13 10:55:16,974 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 12:11:06] 2026-03-13 10:55:16,974 | INFO     | traces error code: 0
[2026-03-13 12:11:06] 2026-03-13 10:55:16,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 12:11:06] 2026-03-13 10:55:17,117 [wrapper] ==== pilot stdout END ====
[2026-03-13 12:11:06] 2026-03-13 10:55:17,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 12:11:06] 2026-03-13 10:55:17,122 [wrapper] pilotpid: 3450570
[2026-03-13 12:11:06] 2026-03-13 10:55:17,125 [wrapper] Pilot exit status: 0
[2026-03-13 12:11:06] 2026-03-13 10:55:17,134 [wrapper] pandaids: 7049784716
[2026-03-13 12:11:06] 2026-03-13 10:55:17,212 [wrapper] cleanup supervisor_pilot 3666766 3450571
[2026-03-13 12:11:06] 2026-03-13 10:55:17,214 [wrapper] Test setup, not cleaning
[2026-03-13 12:11:06] 2026-03-13 10:55:17,217 [wrapper] apfmon messages muted
[2026-03-13 12:11:06] 2026-03-13 10:55:17,219 [wrapper] ==== wrapper stdout END ====
[2026-03-13 12:11:06] 2026-03-13 10:55:17,222 [wrapper] ==== wrapper stderr END ====
[2026-03-13 12:11:06]  *** Error codes and diagnostics ***
[2026-03-13 12:11:06]     "exeErrorCode": 0,
[2026-03-13 12:11:06]     "exeErrorDiag": "",
[2026-03-13 12:11:06]     "pilotErrorCode": 0,
[2026-03-13 12:11:06]     "pilotErrorDiag": "",
[2026-03-13 12:11:06]  *** Listing of results directory ***
[2026-03-13 12:11:06] total 422056
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc      5111 Mar 11 12:07 queuedata.json
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc    585013 Mar 11 12:07 pilot3.tar.gz
[2026-03-13 12:11:06] -rwx------. 1 boinc boinc     36322 Mar 11 12:07 runpilot2-wrapper.sh
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc       100 Mar 13 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 12:11:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 07:41 run_atlas
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc       105 Mar 13 07:41 job.xml
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc      6563 Mar 13 07:41 init_data.xml
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc 220290903 Mar 13 07:41 EVNT.48967008._000444.pool.root.1
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:41 start_atlas.sh
[2026-03-13 12:11:06] drwxrwx--x. 2 boinc boinc      4096 Mar 13 07:41 shared
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc    597521 Mar 13 07:41 input.tar.gz
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc         0 Mar 13 07:41 boinc_lockfile
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc      2563 Mar 13 07:41 pandaJob.out
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc   1006522 Mar 13 07:41 agis_schedconf.cvmfs.json
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc       452 Mar 13 07:41 workernode_map.json
[2026-03-13 12:11:06] drwx------. 5 boinc boinc      4096 Mar 13 07:41 pilot3
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc       528 Mar 13 11:53 boinc_task_state.xml
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc 202876317 Mar 13 11:53 HITS.48967011._011227.pool.root.1
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc      1033 Mar 13 11:54 memory_monitor_summary.json
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc   1511578 Mar 13 11:54 agis_ddmendpoints.agis.ALL.json
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc    417229 Mar 13 11:54 log.48967011._011227.job.log.tgz.1
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc        95 Mar 13 11:54 pilot_heartbeat.json
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc      6402 Mar 13 11:54 heartbeat.json
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc      4829 Mar 13 11:55 pilotlog.txt
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc   2125427 Mar 13 11:55 log.48967011._011227.job.log.1
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc       357 Mar 13 11:55 output.list
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc       620 Mar 13 11:55 runtime_log
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc   2560000 Mar 13 11:55 result.tar.gz
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc      9205 Mar 13 11:55 runtime_log.err
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc       665 Mar 13 11:55 aPLMDmoaWK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRfgLDmddPAbn.diag
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc        26 Mar 13 12:10 wrapper_checkpoint.txt
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc      8192 Mar 13 12:11 boinc_mmap_file
[2026-03-13 12:11:06] -rw-r--r--. 1 boinc boinc     20880 Mar 13 12:11 stderr.txt
[2026-03-13 12:11:06] HITS file was successfully produced:
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc 202876317 Mar 13 11:53 shared/HITS.pool.root.1
[2026-03-13 12:11:06]  *** Contents of shared directory: ***
[2026-03-13 12:11:06] total 416360
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc 220290903 Mar 13 07:41 ATLAS.root_0
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:41 start_atlas.sh
[2026-03-13 12:11:06] -rw-r--r--. 2 boinc boinc    597521 Mar 13 07:41 input.tar.gz
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc 202876317 Mar 13 11:53 HITS.pool.root.1
[2026-03-13 12:11:06] -rw-------. 1 boinc boinc   2560000 Mar 13 11:55 result.tar.gz
12:11:08 (3446792): run_atlas exited; CPU time 54680.845943
12:11:08 (3446792): called boinc_finish(0)

</stderr_txt>
]]>

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