Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
12:55:34 (1614643): wrapper (7.7.26015): starting
12:55:34 (1614643): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 12:55:34] Arguments: --nthreads 4
[2026-03-11 12:55:34] Threads: 4
[2026-03-11 12:55:34] Checking for CVMFS
[2026-03-11 12:55:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 12:55:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 12:55:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 12:55:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 12:55:36] 2.13.3.0 3889861 20369 53056 157164 1 188 3309937 6144001 5934 130560 0 44417629 99.996 760449 1036 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-03-11 12:55:36] CVMFS is ok
[2026-03-11 12:55:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 12:55:36] Checking for apptainer binary...
[2026-03-11 12:55:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 12:55:36] Running /usr/bin/apptainer --version
[2026-03-11 12:55:36] apptainer version 1.4.5
[2026-03-11 12:55:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 12:55:36] Starfish-Cruncher
[2026-03-11 12:55:36] apptainer works
[2026-03-11 12:55:36] Set ATHENA_PROC_NUMBER=4
[2026-03-11 12:55:36] Set ATHENA_CORE_NUMBER=4
[2026-03-11 12:55:36] Starting ATLAS job with PandaID=7036262638
[2026-03-11 12:55:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 15:24:11]  *** The last 200 lines of the pilot log: ***
[2026-03-11 15:24:11] 2026-03-11 20:23:21,749 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 15:24:11] 2026-03-11 20:23:22,146 | INFO     | time since job start (8851s) is within the limit (349056.0s)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,184 | INFO     | job 7036262638 has state=finished
[2026-03-11 15:24:11] 2026-03-11 20:23:22,184 | INFO     | preparing for final server update for job 7036262638 in state='finished'
[2026-03-11 15:24:11] 2026-03-11 20:23:22,185 | INFO     | reading metadata from: /var/lib/boinc-client/slots/5/PanDA_Pilot-7036262638/jobReport.json
[2026-03-11 15:24:11] 2026-03-11 20:23:22,186 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/5/workernode_map.json
[2026-03-11 15:24:11] 2026-03-11 20:23:22,187 | INFO     | this job has now completed (state=finished)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,187 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,187 | INFO     | log transfer has been attempted: DONE
[2026-03-11 15:24:11] 2026-03-11 20:23:22,187 | INFO     | job 7036262638 has finished - writing final server update
[2026-03-11 15:24:11] 2026-03-11 20:23:22,187 | INFO     | total number of processed events: 400 (read)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-7036262638/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | INFO     | extracted standard info from prmon json
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 15:24:11] 2026-03-11 20:23:22,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 15:24:11] 2026-03-11 20:23:22,202 | INFO     | fitting pss+swap vs Time
[2026-03-11 15:24:11] 2026-03-11 20:23:22,203 | INFO     | sum of square deviations: 945282840.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,203 | INFO     | sum of deviations: 6617686137.999998
[2026-03-11 15:24:11] 2026-03-11 20:23:22,203 | INFO     | mean x: 1773256162.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,203 | INFO     | mean y: 2316733.8137931037
[2026-03-11 15:24:11] 2026-03-11 20:23:22,203 | INFO     | intersect: -12411801269.630001
[2026-03-11 15:24:11] 2026-03-11 20:23:22,204 | INFO     | chi2: 1.4527538595564513
[2026-03-11 15:24:11] 2026-03-11 20:23:22,204 | INFO     | sum of square deviations: 850825255.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,204 | INFO     | sum of deviations: 6479789538.000002
[2026-03-11 15:24:11] 2026-03-11 20:23:22,204 | INFO     | mean x: 1773256009.5
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | mean y: 2316511.1
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | intersect: -13502602003.047457
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | chi2: 1.4542491367568577
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | current chi2=1.4542491367568577 (change=-0.1029270850371695 %)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | right removable region: 139
[2026-03-11 15:24:11] 2026-03-11 20:23:22,205 | INFO     | sum of square deviations: 850825255.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | sum of deviations: -11488772116.500002
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | mean x: 1773256314.5
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | mean y: 2345386.307142857
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | intersect: 23946789420.746574
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | chi2: 0.022531854219496453
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | current chi2=0.022531854219496453 (change=98.44902465264309 %)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,206 | INFO     | sum of square deviations: 762879420.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | sum of deviations: -10173101393.999998
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | mean x: 1773256467.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | mean y: 2343097.1925925924
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | intersect: 23648960588.01075
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | chi2: 0.02239363947997467
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | current chi2=0.02239363947997467 (change=0.6134192870917241 %)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,207 | INFO     | left removable region: 20
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | sum of square deviations: 522502820.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | sum of deviations: -6336184923.999999
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | mean x: 1773256589.0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | mean y: 2336961.43697479
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | intersect: 21505917871.498783
[2026-03-11 15:24:11] 2026-03-11 20:23:22,208 | INFO     | chi2: 0.01858723119870972
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | current memory leak: -12.13 B/s (using 119 data points, chi2=0.02)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | could have reported an average CPU frequency of 3639 MHz (8 samples)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | ..............................
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . Timing measurements:
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . get job = 0 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . initial setup = 6 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . payload setup = 4 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . stage-in = 0 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . payload execution = 8827 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . stage-out = 0 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | . log creation = 0 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,209 | INFO     | ..............................
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | 
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | job summary report
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | --------------------------------------------------
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | PanDA job id: 7036262638
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | task id: 48878057
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | errors: (none)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | pilot state: finished 
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | transexitcode: 0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | exeerrorcode: 0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | exeerrordiag: 
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | exitcode: 0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,281 | INFO     | exitmsg: OK
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | cpuconsumptiontime: 34007 s
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | nevents: 400
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | neventsw: 0
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | pid: 1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | pgrp: 1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | corecount: 4
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | event service: False
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | sizes: {0: 2279841, 1: 2280302, 11: 2280302, 8836: 2308427, 8837: 2317439, 8839: 2317495, 8840: 2317817}
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | --------------------------------------------------
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | 
[2026-03-11 15:24:11] 2026-03-11 20:23:22,282 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-03-11 15:24:11] 2026-03-11 20:23:22,299 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,299 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,299 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,299 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,300 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 15:24:11] 2026-03-11 20:23:22,301 | INFO     | job 7036262638 has completed (purged errors)
[2026-03-11 15:24:11] 2026-03-11 20:23:22,301 | INFO     | overall cleanup function is called
[2026-03-11 15:24:11] 2026-03-11 20:23:23,308 | INFO     | --- collectZombieJob: --- 10, [1623687]
[2026-03-11 15:24:11] 2026-03-11 20:23:23,308 | INFO     | zombie collector waiting for pid 1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:23,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 15:24:11] 2026-03-11 20:23:23,309 | INFO     | collected zombie processes
[2026-03-11 15:24:11] 2026-03-11 20:23:23,309 | INFO     | will attempt to kill all subprocesses of pid=1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:23,484 | INFO     | process IDs to be killed: [1623687] (in reverse order)
[2026-03-11 15:24:11] 2026-03-11 20:23:23,547 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 15:24:11] 2026-03-11 20:23:23,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 15:24:11] 2026-03-11 20:23:23,553 | INFO     | did not find any defunct processes belonging to 1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:23,557 | INFO     | did not find any defunct processes belonging to 1623687
[2026-03-11 15:24:11] 2026-03-11 20:23:23,557 | INFO     | ready for new job
[2026-03-11 15:24:11] 2026-03-11 20:23:23,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 15:24:11] 2026-03-11 20:23:23,558 | INFO     | **************************************
[2026-03-11 15:24:11] 2026-03-11 20:23:23,558 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 15:24:11] 2026-03-11 20:23:23,558 | INFO     | **************************************
[2026-03-11 15:24:11] 2026-03-11 20:23:23,559 | INFO     | 
[2026-03-11 15:24:11] 2026-03-11 20:23:23,560 | INFO     | architecture information:
[2026-03-11 15:24:11] 2026-03-11 20:23:23,560 | INFO     | executing command: cat /etc/os-release
[2026-03-11 15:24:11] 2026-03-11 20:23:23,572 | INFO     | cat /etc/os-release:
[2026-03-11 15:24:11] NAME="CentOS Linux"
[2026-03-11 15:24:11] VERSION="7 (Core)"
[2026-03-11 15:24:11] ID="centos"
[2026-03-11 15:24:11] ID_LIKE="rhel fedora"
[2026-03-11 15:24:11] VERSION_ID="7"
[2026-03-11 15:24:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 15:24:11] ANSI_COLOR="0;31"
[2026-03-11 15:24:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 15:24:11] HOME_URL="https://www.centos.org/"
[2026-03-11 15:24:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 15:24:11] 
[2026-03-11 15:24:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 15:24:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 15:24:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 15:24:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 15:24:11] 
[2026-03-11 15:24:11] 2026-03-11 20:23:23,572 | INFO     | **************************************
[2026-03-11 15:24:11] 2026-03-11 20:23:24,074 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-11 15:24:11] 2026-03-11 20:23:24,091 | INFO     | sufficient remaining disk space (1809558011904 B)
[2026-03-11 15:24:11] 2026-03-11 20:23:24,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | INFO     | update_server=False
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 15:24:11] 2026-03-11 20:23:24,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 15:24:11] 2026-03-11 20:23:24,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:24:11] 2026-03-11 20:23:24,228 | INFO     | all data control threads have been joined
[2026-03-11 15:24:11] 2026-03-11 20:23:24,382 | INFO     | all payload control threads have been joined
[2026-03-11 15:24:11] 2026-03-11 20:23:24,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 15:24:11] 2026-03-11 20:23:24,845 | INFO     | aborting loop
[2026-03-11 15:24:11] 2026-03-11 20:23:24,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 15:24:11] 2026-03-11 20:23:25,097 | INFO     | [job] retrieve thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,098 | INFO     | [job] queue monitor thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,230 | INFO     | [data] control thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,358 | INFO     | [payload] validate_post thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,385 | INFO     | [payload] control thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,448 | INFO     | all job control threads have been joined
[2026-03-11 15:24:11] 2026-03-11 20:23:25,551 | INFO     | [payload] failed_post thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,851 | INFO     | [job] job monitor thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:25,983 | INFO     | [job] validate thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,102 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,319 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,387 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,454 | INFO     | [job] control thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,558 | INFO     | [data] copytool_in thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:26,955 | INFO     | [data] copytool_out thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:28,100 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:23:34,730 | INFO     | job.realtimelogging is not enabled
[2026-03-11 15:24:11] 2026-03-11 20:23:35,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 15:24:11] 2026-03-11 20:24:05,664 | INFO     | [monitor] cgroup control has ended
[2026-03-11 15:24:11] 2026-03-11 20:24:05,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132004240074560)>', '<ExcThread(monitor, started 132003950503680)>']
[2026-03-11 15:24:11] 2026-03-11 20:24:06,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 15:24:11] 2026-03-11 20:24:06,303 | INFO     | [monitor] control thread has ended
[2026-03-11 15:24:11] 2026-03-11 20:24:10,966 | INFO     | all workflow threads have been joined
[2026-03-11 15:24:11] 2026-03-11 20:24:10,966 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 15:24:11] 2026-03-11 20:24:10,967 | INFO     | traces error code: 0
[2026-03-11 15:24:11] 2026-03-11 20:24:10,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 15:24:11] 2026-03-11 20:24:11,044 [wrapper] ==== pilot stdout END ====
[2026-03-11 15:24:11] 2026-03-11 20:24:11,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 15:24:11] 2026-03-11 20:24:11,047 [wrapper] pilotpid: 1618956
[2026-03-11 15:24:11] 2026-03-11 20:24:11,049 [wrapper] Pilot exit status: 0
[2026-03-11 15:24:11] 2026-03-11 20:24:11,057 [wrapper] pandaids: 7036262638
[2026-03-11 15:24:11] 2026-03-11 20:24:11,096 [wrapper] cleanup supervisor_pilot 1766133 1618957
[2026-03-11 15:24:11] 2026-03-11 20:24:11,099 [wrapper] Test setup, not cleaning
[2026-03-11 15:24:11] 2026-03-11 20:24:11,101 [wrapper] apfmon messages muted
[2026-03-11 15:24:11] 2026-03-11 20:24:11,103 [wrapper] ==== wrapper stdout END ====
[2026-03-11 15:24:11] 2026-03-11 20:24:11,105 [wrapper] ==== wrapper stderr END ====
[2026-03-11 15:24:11]  *** Error codes and diagnostics ***
[2026-03-11 15:24:11]     "exeErrorCode": 0,
[2026-03-11 15:24:11]     "exeErrorDiag": "",
[2026-03-11 15:24:11]     "pilotErrorCode": 0,
[2026-03-11 15:24:11]     "pilotErrorDiag": "",
[2026-03-11 15:24:11]  *** Listing of results directory ***
[2026-03-11 15:24:11] total 500756
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc    584627 Mar  3 02:25 pilot3.tar.gz
[2026-03-11 15:24:11] -rwx------ 1 boinc boinc     36322 Mar  3 03:05 runpilot2-wrapper.sh
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc      5111 Mar  3 03:06 queuedata.json
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc       100 Mar 11 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 15:24:11] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 12:55 run_atlas
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc       105 Mar 11 12:55 job.xml
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc      9665 Mar 11 12:55 init_data.xml
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc 293985090 Mar 11 12:55 EVNT.48717157._000027.pool.root.1
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc     15845 Mar 11 12:55 start_atlas.sh
[2026-03-11 15:24:11] drwxrwx--x 2 boinc boinc      4096 Mar 11 12:55 shared
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc    597954 Mar 11 12:55 input.tar.gz
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc         0 Mar 11 12:55 boinc_lockfile
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc      2593 Mar 11 12:55 pandaJob.out
[2026-03-11 15:24:11] -rw------- 1 boinc boinc   1006243 Mar 11 12:55 agis_schedconf.cvmfs.json
[2026-03-11 15:24:11] -rw------- 1 boinc boinc   1511578 Mar 11 12:55 agis_ddmendpoints.agis.ALL.json
[2026-03-11 15:24:11] -rw------- 1 boinc boinc       433 Mar 11 12:55 workernode_map.json
[2026-03-11 15:24:11] drwx------ 5 boinc boinc      4096 Mar 11 12:55 pilot3
[2026-03-11 15:24:11] -rw------- 1 boinc boinc 211616281 Mar 11 15:22 HITS.48878057._000675.pool.root.1
[2026-03-11 15:24:11] -rw------- 1 boinc boinc        95 Mar 11 15:23 pilot_heartbeat.json
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc       529 Mar 11 15:23 boinc_task_state.xml
[2026-03-11 15:24:11] -rw------- 1 boinc boinc      1026 Mar 11 15:23 memory_monitor_summary.json
[2026-03-11 15:24:11] -rw------- 1 boinc boinc    340109 Mar 11 15:23 log.48878057._000675.job.log.tgz.1
[2026-03-11 15:24:11] -rw------- 1 boinc boinc      6310 Mar 11 15:23 heartbeat.json
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc      8192 Mar 11 15:24 boinc_mmap_file
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc        27 Mar 11 15:24 wrapper_checkpoint.txt
[2026-03-11 15:24:11] -rw------- 1 boinc boinc      4629 Mar 11 15:24 pilotlog.txt
[2026-03-11 15:24:11] -rw------- 1 boinc boinc   1275135 Mar 11 15:24 log.48878057._000675.job.log.1
[2026-03-11 15:24:11] -rw------- 1 boinc boinc       357 Mar 11 15:24 output.list
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc       620 Mar 11 15:24 runtime_log
[2026-03-11 15:24:11] -rw------- 1 boinc boinc   1628160 Mar 11 15:24 result.tar.gz
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc      8932 Mar 11 15:24 runtime_log.err
[2026-03-11 15:24:11] -rw------- 1 boinc boinc       653 Mar 11 15:24 3rWNDmVsaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSFELDmrQfyWo.diag
[2026-03-11 15:24:11] -rw-r--r-- 1 boinc boinc     20930 Mar 11 15:24 stderr.txt
[2026-03-11 15:24:11] HITS file was successfully produced:
[2026-03-11 15:24:11] -rw------- 1 boinc boinc 211616281 Mar 11 15:22 shared/HITS.pool.root.1
[2026-03-11 15:24:11]  *** Contents of shared directory: ***
[2026-03-11 15:24:11] total 495956
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc 293985090 Mar 11 12:55 ATLAS.root_0
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc     15845 Mar 11 12:55 start_atlas.sh
[2026-03-11 15:24:11] -rw-r--r-- 2 boinc boinc    597954 Mar 11 12:55 input.tar.gz
[2026-03-11 15:24:11] -rw------- 1 boinc boinc 211616281 Mar 11 15:22 HITS.pool.root.1
[2026-03-11 15:24:11] -rw------- 1 boinc boinc   1628160 Mar 11 15:24 result.tar.gz
15:24:12 (1614643): run_atlas exited; CPU time 34139.456178
15:24:12 (1614643): called boinc_finish(0)

</stderr_txt>
]]>

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