Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:32 (3908263): wrapper (7.7.26015): starting
09:35:32 (3908263): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 09:35:32] Arguments: --nthreads 4
[2026-03-13 09:35:32] Threads: 4
[2026-03-13 09:35:32] Checking for CVMFS
[2026-03-13 09:35:32] No cvmfs_config command found, will try listing directly
[2026-03-13 09:35:32] CVMFS is ok
[2026-03-13 09:35:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 09:35:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 09:35:32] Further information can be found at the LHC@home message board.
[2026-03-13 09:35:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 09:35:32] Checking for apptainer binary...
[2026-03-13 09:35:32] which: no apptainer in ((null))
[2026-03-13 09:35:32] apptainer is not installed, using version from CVMFS
[2026-03-13 09:35:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 09:35:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-13 09:35:32] apptainer works
[2026-03-13 09:35:32] Set ATHENA_PROC_NUMBER=4
[2026-03-13 09:35:32] Set ATHENA_CORE_NUMBER=4
[2026-03-13 09:35:32] Starting ATLAS job with PandaID=7047232471
[2026-03-13 09:35:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 11:16:30]  *** The last 200 lines of the pilot log: ***
[2026-03-13 11:16:30]  mtime=0
[2026-03-13 11:16:30]  protocol_id=None
[2026-03-13 11:16:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-13 11:16:30]  replicas=None
[2026-03-13 11:16:30]  scope=mc23_13p6TeV
[2026-03-13 11:16:30]  status=None
[2026-03-13 11:16:30]  status_code=0
[2026-03-13 11:16:30]  storage_token=
[2026-03-13 11:16:30]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7047232471/log.48958635._002262.job.log.tgz.1
[2026-03-13 11:16:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/36/log.48958635._002262.job.log.tgz.1
[2026-03-13 11:16:30]  workdir=None
[2026-03-13 11:16:30] ]
[2026-03-13 11:16:30] 2026-03-13 10:03:48,935 | INFO     | transferring file log.48958635._002262.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7047232471/log.48958635._002262.job.log.tgz.1 to /var/lib/
[2026-03-13 11:16:30] 2026-03-13 10:03:48,935 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7047232471/log.48958635._002262.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-03-13 11:16:30] 2026-03-13 10:03:48,953 | INFO     | adding to output.list: log.48958635._002262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/36/log.48958635._002262.job.log.tg
[2026-03-13 11:16:30] 2026-03-13 10:03:48,954 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-13 11:16:30] 2026-03-13 10:03:48,954 | INFO     | summary of transferred files:
[2026-03-13 11:16:30] 2026-03-13 10:03:48,954 | INFO     |  -- lfn=log.48958635._002262.job.log.tgz.1, status_code=0, status=transferred
[2026-03-13 11:16:30] 2026-03-13 10:03:48,954 | INFO     | stage-out finished correctly
[2026-03-13 11:16:30] 2026-03-13 10:03:49,138 | INFO     | time since job start (5284s) is within the limit (349056.0s)
[2026-03-13 11:16:30] 2026-03-13 10:03:49,436 | INFO     | monitor loop #376: job 0:7047232471 is in state 'finished'
[2026-03-13 11:16:30] 2026-03-13 10:03:49,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 11:16:30] 2026-03-13 10:03:50,939 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-13 11:16:30] 2026-03-13 10:03:51,143 | INFO     | time since job start (5286s) is within the limit (349056.0s)
[2026-03-13 11:16:30] 2026-03-13 10:03:51,939 | INFO     | monitor loop #377: job 0:7047232471 is in state 'finished'
[2026-03-13 11:16:30] 2026-03-13 10:03:51,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-13 11:16:30] 2026-03-13 10:03:52,590 | INFO     | job 7047232471 has state=finished
[2026-03-13 11:16:30] 2026-03-13 10:03:52,590 | INFO     | preparing for final server update for job 7047232471 in state='finished'
[2026-03-13 11:16:30] 2026-03-13 10:03:53,148 | INFO     | time since job start (5288s) is within the limit (349056.0s)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,184 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,184 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7047232471/jobReport.json
[2026-03-13 11:16:30] 2026-03-13 10:03:53,185 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | INFO     | this job has now completed (state=finished)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | INFO     | log transfer has been attempted: DONE
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | INFO     | job 7047232471 has finished - writing final server update
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3913135/.job.ad'
[2026-03-13 11:16:30] 2026-03-13 10:03:53,186 | INFO     | total number of processed events: 400 (read)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,203 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7047232471/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,204 | INFO     | extracted standard info from prmon json
[2026-03-13 11:16:30] 2026-03-13 10:03:53,204 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 11:16:30] 2026-03-13 10:03:53,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 11:16:30] 2026-03-13 10:03:53,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 11:16:30] 2026-03-13 10:03:53,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | fitting pss+swap vs Time
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | sum of square deviations: 158737860.0
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | sum of deviations: -237587710.5
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | mean x: 1773393680.5
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | mean y: 2351884.6875
[2026-03-13 11:16:30] 2026-03-13 10:03:53,205 | INFO     | intersect: 2656643333.2755275
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | chi2: 0.0006856770763464809
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | current memory leak: -1.50 B/s (using 80 data points, chi2=0.00)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | could have reported an average CPU frequency of 3574 MHz (6 samples)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | ..............................
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . Timing measurements:
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . get job = 0 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . initial setup = 5 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . payload setup = 5 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . stage-in = 0 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . payload execution = 5263 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . stage-out = 0 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | . log creation = 0 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,206 | INFO     | ..............................
[2026-03-13 11:16:30] 2026-03-13 10:03:53,251 | INFO     | 
[2026-03-13 11:16:30] 2026-03-13 10:03:53,251 | INFO     | job summary report
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | --------------------------------------------------
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | PanDA job id: 7047232471
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | task id: 48958635
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | errors: (none)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | pilot state: finished 
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | transexitcode: 0
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | exeerrorcode: 0
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | exeerrordiag: 
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | exitcode: 0
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | exitmsg: OK
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | cpuconsumptiontime: 20084 s
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | nevents: 400
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | neventsw: 0
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | pid: 3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | pgrp: 3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | corecount: 4
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | event service: False
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | sizes: {0: 2279936, 1: 2280198, 11: 2280226, 5272: 2306813, 5273: 2315835, 5275: 2315891, 5277: 2316213}
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | --------------------------------------------------
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | 
[2026-03-13 11:16:30] 2026-03-13 10:03:53,252 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | job 7047232471 has completed (purged errors)
[2026-03-13 11:16:30] 2026-03-13 10:03:53,269 | INFO     | overall cleanup function is called
[2026-03-13 11:16:30] 2026-03-13 10:03:54,275 | INFO     | --- collectZombieJob: --- 10, [3931219]
[2026-03-13 11:16:30] 2026-03-13 10:03:54,276 | INFO     | zombie collector waiting for pid 3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:54,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 11:16:30] 2026-03-13 10:03:54,279 | INFO     | collected zombie processes
[2026-03-13 11:16:30] 2026-03-13 10:03:54,279 | INFO     | will attempt to kill all subprocesses of pid=3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:55,354 | INFO     | PID=3916876 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 11:16:30] 2026-03-13 10:03:55,354 | INFO     | .. there are 44 such processes running
[2026-03-13 11:16:30] 2026-03-13 10:03:55,409 | INFO     | process IDs to be killed: [3931219] (in reverse order)
[2026-03-13 11:16:30] 2026-03-13 10:03:55,666 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 11:16:30] 2026-03-13 10:03:55,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 11:16:30] 2026-03-13 10:03:55,698 | INFO     | did not find any defunct processes belonging to 3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:55,729 | INFO     | did not find any defunct processes belonging to 3931219
[2026-03-13 11:16:30] 2026-03-13 10:03:55,729 | INFO     | ready for new job
[2026-03-13 11:16:30] 2026-03-13 10:03:55,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 11:16:30] 2026-03-13 10:03:55,730 | INFO     | **************************************
[2026-03-13 11:16:30] 2026-03-13 10:03:55,730 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 11:16:30] 2026-03-13 10:03:55,730 | INFO     | **************************************
[2026-03-13 11:16:30] 2026-03-13 10:03:55,730 | INFO     | 
[2026-03-13 11:16:30] 2026-03-13 10:03:55,736 | INFO     | architecture information:
[2026-03-13 11:16:30] 2026-03-13 10:03:55,736 | INFO     | executing command: cat /etc/os-release
[2026-03-13 11:16:30] 2026-03-13 10:03:55,763 | INFO     | cat /etc/os-release:
[2026-03-13 11:16:30] NAME="CentOS Linux"
[2026-03-13 11:16:30] VERSION="7 (Core)"
[2026-03-13 11:16:30] ID="centos"
[2026-03-13 11:16:30] ID_LIKE="rhel fedora"
[2026-03-13 11:16:30] VERSION_ID="7"
[2026-03-13 11:16:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 11:16:30] ANSI_COLOR="0;31"
[2026-03-13 11:16:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 11:16:30] HOME_URL="https://www.centos.org/"
[2026-03-13 11:16:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 11:16:30] 
[2026-03-13 11:16:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 11:16:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 11:16:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 11:16:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 11:16:30] 
[2026-03-13 11:16:30] 2026-03-13 10:03:55,763 | INFO     | **************************************
[2026-03-13 11:16:30] 2026-03-13 10:03:56,266 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-03-13 11:16:30] 2026-03-13 10:03:56,283 | INFO     | sufficient remaining disk space (21038628864 B)
[2026-03-13 11:16:30] 2026-03-13 10:03:56,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | INFO     | update_server=False
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 11:16:30] 2026-03-13 10:03:56,284 | INFO     | aborting loop
[2026-03-13 11:16:30] 2026-03-13 10:03:56,575 | INFO     | all data control threads have been joined
[2026-03-13 11:16:30] 2026-03-13 10:03:56,875 | INFO     | all payload control threads have been joined
[2026-03-13 11:16:30] 2026-03-13 10:03:56,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 11:16:30] 2026-03-13 10:03:57,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 11:16:30] 2026-03-13 10:03:57,282 | INFO     | all job control threads have been joined
[2026-03-13 11:16:30] 2026-03-13 10:03:57,289 | INFO     | [job] retrieve thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,289 | INFO     | [job] job monitor thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,370 | INFO     | [job] validate thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,442 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,442 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,473 | INFO     | [payload] validate_post thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,580 | INFO     | [data] control thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,721 | INFO     | [data] copytool_in thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:57,881 | INFO     | [payload] control thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:58,005 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:58,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:16:30] 2026-03-13 10:03:58,287 | INFO     | [job] control thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:58,367 | INFO     | [payload] failed_post thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:59,024 | INFO     | [data] copytool_out thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:03:59,272 | INFO     | [job] queue monitor thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:04:01,000 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:04:07,190 | INFO     | job.realtimelogging is not enabled
[2026-03-13 11:16:30] 2026-03-13 10:04:08,195 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 11:16:30] 2026-03-13 10:04:53,741 | INFO     | [monitor] cgroup control has ended
[2026-03-13 11:16:30] 2026-03-13 10:04:55,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23259342858048)>', '<ExcThread(monitor, started 23259105212160)>']
[2026-03-13 11:16:30] 2026-03-13 10:04:55,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 11:16:30] 2026-03-13 10:04:55,577 | INFO     | [monitor] control thread has ended
[2026-03-13 11:16:30] 2026-03-13 10:05:00,044 | INFO     | all workflow threads have been joined
[2026-03-13 11:16:30] 2026-03-13 10:05:00,045 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 11:16:30] 2026-03-13 10:05:00,045 | INFO     | traces error code: 0
[2026-03-13 11:16:30] 2026-03-13 10:05:00,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 11:16:30] 2026-03-13 10:05:00,158 [wrapper] ==== pilot stdout END ====
[2026-03-13 11:16:30] 2026-03-13 10:05:00,161 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 11:16:30] 2026-03-13 10:05:00,164 [wrapper] pilotpid: 3916876
[2026-03-13 11:16:30] 2026-03-13 10:05:00,167 [wrapper] Pilot exit status: 0
[2026-03-13 11:16:30] 2026-03-13 10:05:00,176 [wrapper] pandaids: 7047232471
[2026-03-13 11:16:30] 2026-03-13 10:05:00,307 [wrapper] cleanup supervisor_pilot  333915 3916878
[2026-03-13 11:16:30] 2026-03-13 10:05:00,309 [wrapper] Test setup, not cleaning
[2026-03-13 11:16:30] 2026-03-13 10:05:00,313 [wrapper] apfmon messages muted
[2026-03-13 11:16:30] 2026-03-13 10:05:00,316 [wrapper] ==== wrapper stdout END ====
[2026-03-13 11:16:30] 2026-03-13 10:05:00,319 [wrapper] ==== wrapper stderr END ====
[2026-03-13 11:16:30]  *** Error codes and diagnostics ***
[2026-03-13 11:16:30]     "exeErrorCode": 0,
[2026-03-13 11:16:30]     "exeErrorDiag": "",
[2026-03-13 11:16:30]     "pilotErrorCode": 0,
[2026-03-13 11:16:30]     "pilotErrorDiag": "",
[2026-03-13 11:16:30]  *** Listing of results directory ***
[2026-03-13 11:16:30] total 445508
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc    584627 Mar  9 12:47 pilot3.tar.gz
[2026-03-13 11:16:30] -rwx------. 1 boinc boinc     36322 Mar  9 12:50 runpilot2-wrapper.sh
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc      5111 Mar  9 12:51 queuedata.json
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc       100 Mar 13 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 11:16:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 09:35 run_atlas
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc       105 Mar 13 09:35 job.xml
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc 266146222 Mar 13 09:35 EVNT.48958633._000088.pool.root.1
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc     15845 Mar 13 09:35 start_atlas.sh
[2026-03-13 11:16:30] drwxrwx--x. 2 boinc boinc      4096 Mar 13 09:35 shared
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc    597940 Mar 13 09:35 input.tar.gz
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc      6709 Mar 13 09:35 init_data.xml
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc         0 Mar 13 09:35 boinc_lockfile
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc      2526 Mar 13 09:35 pandaJob.out
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc   1006487 Mar 13 09:35 agis_schedconf.cvmfs.json
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc   1511578 Mar 13 09:35 agis_ddmendpoints.agis.ALL.json
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc       445 Mar 13 09:35 workernode_map.json
[2026-03-13 11:16:30] drwx------. 5 boinc boinc      4096 Mar 13 09:35 pilot3
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc        95 Mar 13 11:03 pilot_heartbeat.json
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc 184042810 Mar 13 11:03 HITS.48958635._002262.pool.root.1
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc       529 Mar 13 11:03 boinc_task_state.xml
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc      1047 Mar 13 11:03 memory_monitor_summary.json
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc    269254 Mar 13 11:03 log.48958635._002262.job.log.tgz.1
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc      6354 Mar 13 11:03 heartbeat.json
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc      4630 Mar 13 11:05 pilotlog.txt
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc    765407 Mar 13 11:05 log.48958635._002262.job.log.1
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc       357 Mar 13 11:05 output.list
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc       620 Mar 13 11:05 runtime_log
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc   1054720 Mar 13 11:05 result.tar.gz
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc      9221 Mar 13 11:05 runtime_log.err
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc       662 Mar 13 11:05 hGGKDmOJoJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmShZLDmOpQgon.diag
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc        26 Mar 13 11:16 wrapper_checkpoint.txt
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc      8192 Mar 13 11:16 boinc_mmap_file
[2026-03-13 11:16:30] -rw-r--r--. 1 boinc boinc     21604 Mar 13 11:16 stderr.txt
[2026-03-13 11:16:30] HITS file was successfully produced:
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc 184042810 Mar 13 11:03 shared/HITS.pool.root.1
[2026-03-13 11:16:30]  *** Contents of shared directory: ***
[2026-03-13 11:16:30] total 441284
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc 266146222 Mar 13 09:35 ATLAS.root_0
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc     15845 Mar 13 09:35 start_atlas.sh
[2026-03-13 11:16:30] -rw-r--r--. 2 boinc boinc    597940 Mar 13 09:35 input.tar.gz
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc 184042810 Mar 13 11:03 HITS.pool.root.1
[2026-03-13 11:16:30] -rw-------. 1 boinc boinc   1054720 Mar 13 11:05 result.tar.gz
11:16:31 (3908263): run_atlas exited; CPU time 20336.712365
11:16:31 (3908263): called boinc_finish(0)

</stderr_txt>
]]>

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