Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
09:24:49 (873502): wrapper (7.7.26015): starting
09:24:49 (873502): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 09:24:49] Arguments: --nthreads 4
[2026-03-11 09:24:49] Threads: 4
[2026-03-11 09:24:49] Checking for CVMFS
[2026-03-11 09:24:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 09:24:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 09:24:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 09:24:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 09:24:49] 2.13.3.0 1760492 7410 50872 157156 2 188 3589478 4096001 1788 130560 0 5951173 99.991 262599 834 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 09:24:49] CVMFS is ok
[2026-03-11 09:24:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 09:24:49] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 09:24:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 09:24:49] Further information can be found at the LHC@home message board.
[2026-03-11 09:24:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 09:24:49] Checking for apptainer binary...
[2026-03-11 09:24:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 09:24:49] Running /usr/bin/apptainer --version
[2026-03-11 09:24:49] apptainer version 1.4.5
[2026-03-11 09:24:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 09:24:49] OptiPlex7070-Ubuntu
[2026-03-11 09:24:49] apptainer works
[2026-03-11 09:24:49] Set ATHENA_PROC_NUMBER=4
[2026-03-11 09:24:49] Set ATHENA_CORE_NUMBER=4
[2026-03-11 09:24:49] Starting ATLAS job with PandaID=7049664181
[2026-03-11 09:24:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 14:11:41]  *** The last 200 lines of the pilot log: ***
[2026-03-11 14:11:41] 2026-03-11 18:11:08,002 | INFO     | log transfer has been attempted: DONE
[2026-03-11 14:11:41] 2026-03-11 18:11:08,002 | INFO     | job 7049664181 has finished - writing final server update
[2026-03-11 14:11:41] 2026-03-11 18:11:08,002 | INFO     | total number of processed events: 400 (read)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,005 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-7049664181/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,005 | INFO     | extracted standard info from prmon json
[2026-03-11 14:11:41] 2026-03-11 18:11:08,006 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 14:11:41] 2026-03-11 18:11:08,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 14:11:41] 2026-03-11 18:11:08,006 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 14:11:41] 2026-03-11 18:11:08,006 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 14:11:41] 2026-03-11 18:11:08,010 | INFO     | fitting pss+swap vs Time
[2026-03-11 14:11:41] 2026-03-11 18:11:08,010 | INFO     | sum of square deviations: 6953769450.5
[2026-03-11 14:11:41] 2026-03-11 18:11:08,012 | INFO     | sum of deviations: -43182277712.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,012 | INFO     | mean x: 1773244085.5
[2026-03-11 14:11:41] 2026-03-11 18:11:08,012 | INFO     | mean y: 2352231.276595745
[2026-03-11 14:11:41] 2026-03-11 18:11:08,012 | INFO     | intersect: 11014037202.471123
[2026-03-11 14:11:41] 2026-03-11 18:11:08,013 | INFO     | chi2: 1.8833349177051677
[2026-03-11 14:11:41] 2026-03-11 18:11:08,013 | INFO     | sum of square deviations: 6590404498.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,015 | INFO     | sum of deviations: -26291382165.000004
[2026-03-11 14:11:41] 2026-03-11 18:11:08,015 | INFO     | mean x: 1773243933.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,015 | INFO     | mean y: 2359222.5667870035
[2026-03-11 14:11:41] 2026-03-11 18:11:08,015 | INFO     | intersect: 7076436986.445895
[2026-03-11 14:11:41] 2026-03-11 18:11:08,016 | INFO     | chi2: 1.2234859875474275
[2026-03-11 14:11:41] 2026-03-11 18:11:08,016 | INFO     | current chi2=1.2234859875474275 (change=35.036196905527675 %)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,016 | INFO     | sum of square deviations: 6239923508.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | sum of deviations: -25855901213.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | mean x: 1773243780.5
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | mean y: 2359412.095588235
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | intersect: 7350016151.219618
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | chi2: 1.2221578337827843
[2026-03-11 14:11:41] 2026-03-11 18:11:08,018 | INFO     | current chi2=1.2221578337827843 (change=0.10855488155656146 %)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,019 | INFO     | right removable region: 271
[2026-03-11 14:11:41] 2026-03-11 18:11:08,019 | INFO     | sum of square deviations: 6590404498.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,021 | INFO     | sum of deviations: -69301534590.99998
[2026-03-11 14:11:41] 2026-03-11 18:11:08,021 | INFO     | mean x: 1773244238.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,021 | INFO     | mean y: 2363062.588447653
[2026-03-11 14:11:41] 2026-03-11 18:11:08,021 | INFO     | intersect: 18648949464.88615
[2026-03-11 14:11:41] 2026-03-11 18:11:08,021 | INFO     | chi2: 0.8097695222626513
[2026-03-11 14:11:41] 2026-03-11 18:11:08,022 | INFO     | current chi2=0.8097695222626513 (change=57.003424369715894 %)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,022 | INFO     | sum of square deviations: 6239923508.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,024 | INFO     | sum of deviations: -64435707483.50001
[2026-03-11 14:11:41] 2026-03-11 18:11:08,024 | INFO     | mean x: 1773244390.5
[2026-03-11 14:11:41] 2026-03-11 18:11:08,024 | INFO     | mean y: 2360943.018382353
[2026-03-11 14:11:41] 2026-03-11 18:11:08,024 | INFO     | intersect: 18313524003.995964
[2026-03-11 14:11:41] 2026-03-11 18:11:08,024 | INFO     | chi2: 0.8083752416406076
[2026-03-11 14:11:41] 2026-03-11 18:11:08,025 | INFO     | current chi2=0.8083752416406076 (change=0.17218240298150916 %)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,025 | INFO     | left removable region: 20
[2026-03-11 14:11:41] 2026-03-11 18:11:08,025 | INFO     | sum of square deviations: 4903347750.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,026 | INFO     | sum of deviations: -35963080150.99999
[2026-03-11 14:11:41] 2026-03-11 18:11:08,027 | INFO     | mean x: 1773244360.0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,027 | INFO     | mean y: 2363366.1633466138
[2026-03-11 14:11:41] 2026-03-11 18:11:08,027 | INFO     | intersect: 13008034653.905214
[2026-03-11 14:11:41] 2026-03-11 18:11:08,027 | INFO     | chi2: 0.12506330728118173
[2026-03-11 14:11:41] 2026-03-11 18:11:08,027 | INFO     | current memory leak: -7.33 B/s (using 251 data points, chi2=0.13)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | could have reported an average CPU frequency of 3357 MHz (13 samples)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | ..............................
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . Timing measurements:
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . get job = 0 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . initial setup = 4 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . payload setup = 2 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . stage-in = 0 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . payload execution = 17144 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . stage-out = 2 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | . log creation = 0 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,028 | INFO     | ..............................
[2026-03-11 14:11:41] 2026-03-11 18:11:08,563 | INFO     | 
[2026-03-11 14:11:41] 2026-03-11 18:11:08,563 | INFO     | job summary report
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | --------------------------------------------------
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | PanDA job id: 7049664181
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | task id: 48966932
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | errors: (none)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | pilot state: finished 
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | transexitcode: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | exeerrorcode: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | exeerrordiag: 
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | exitcode: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | exitmsg: OK
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | cpuconsumptiontime: 67270 s
[2026-03-11 14:11:41] 2026-03-11 18:11:08,564 | INFO     | nevents: 400
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | neventsw: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | pid: 881847
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | pgrp: 881847
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | corecount: 4
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | event service: False
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | sizes: {0: 2280244, 11: 2280244, 17151: 2312436, 17154: 2321462, 17156: 2321518, 17158: 2321712}
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | --------------------------------------------------
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | 
[2026-03-11 14:11:41] 2026-03-11 18:11:08,565 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-11 14:11:41] 2026-03-11 18:11:08,580 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,580 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,580 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,581 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | job 7049664181 has completed (purged errors)
[2026-03-11 14:11:41] 2026-03-11 18:11:08,582 | INFO     | overall cleanup function is called
[2026-03-11 14:11:41] 2026-03-11 18:11:09,589 | INFO     | --- collectZombieJob: --- 10, [881847]
[2026-03-11 14:11:41] 2026-03-11 18:11:09,589 | INFO     | zombie collector waiting for pid 881847
[2026-03-11 14:11:41] 2026-03-11 18:11:09,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 14:11:41] 2026-03-11 18:11:09,589 | INFO     | collected zombie processes
[2026-03-11 14:11:41] 2026-03-11 18:11:09,589 | INFO     | will attempt to kill all subprocesses of pid=881847
[2026-03-11 14:11:41] 2026-03-11 18:11:09,738 | INFO     | process IDs to be killed: [881847] (in reverse order)
[2026-03-11 14:11:41] 2026-03-11 18:11:09,777 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 14:11:41] 2026-03-11 18:11:09,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 14:11:41] 2026-03-11 18:11:09,780 | INFO     | did not find any defunct processes belonging to 881847
[2026-03-11 14:11:41] 2026-03-11 18:11:09,783 | INFO     | did not find any defunct processes belonging to 881847
[2026-03-11 14:11:41] 2026-03-11 18:11:09,783 | INFO     | ready for new job
[2026-03-11 14:11:41] 2026-03-11 18:11:09,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 14:11:41] 2026-03-11 18:11:09,785 | INFO     | **************************************
[2026-03-11 14:11:41] 2026-03-11 18:11:09,785 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 14:11:41] 2026-03-11 18:11:09,785 | INFO     | **************************************
[2026-03-11 14:11:41] 2026-03-11 18:11:09,785 | INFO     | 
[2026-03-11 14:11:41] 2026-03-11 18:11:09,786 | INFO     | architecture information:
[2026-03-11 14:11:41] 2026-03-11 18:11:09,786 | INFO     | executing command: cat /etc/os-release
[2026-03-11 14:11:41] 2026-03-11 18:11:09,798 | INFO     | cat /etc/os-release:
[2026-03-11 14:11:41] NAME="CentOS Linux"
[2026-03-11 14:11:41] VERSION="7 (Core)"
[2026-03-11 14:11:41] ID="centos"
[2026-03-11 14:11:41] ID_LIKE="rhel fedora"
[2026-03-11 14:11:41] VERSION_ID="7"
[2026-03-11 14:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 14:11:41] ANSI_COLOR="0;31"
[2026-03-11 14:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 14:11:41] HOME_URL="https://www.centos.org/"
[2026-03-11 14:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 14:11:41] 
[2026-03-11 14:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 14:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 14:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 14:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 14:11:41] 
[2026-03-11 14:11:41] 2026-03-11 18:11:09,798 | INFO     | **************************************
[2026-03-11 14:11:41] 2026-03-11 18:11:10,301 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2026-03-11 14:11:41] 2026-03-11 18:11:10,312 | INFO     | sufficient remaining disk space (410983071744 B)
[2026-03-11 14:11:41] 2026-03-11 18:11:10,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | INFO     | update_server=False
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:11:41] 2026-03-11 18:11:10,313 | INFO     | aborting loop
[2026-03-11 14:11:41] 2026-03-11 18:11:10,647 | INFO     | all data control threads have been joined
[2026-03-11 14:11:41] 2026-03-11 18:11:10,947 | INFO     | all job control threads have been joined
[2026-03-11 14:11:41] 2026-03-11 18:11:11,317 | INFO     | [job] retrieve thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,319 | INFO     | [job] job monitor thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,333 | INFO     | all payload control threads have been joined
[2026-03-11 14:11:41] 2026-03-11 18:11:11,432 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,486 | INFO     | [payload] validate_post thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 14:11:41] 2026-03-11 18:11:11,635 | INFO     | [data] copytool_in thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,652 | INFO     | [data] control thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:11,952 | INFO     | [job] control thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,193 | INFO     | [payload] failed_post thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,318 | INFO     | [data] copytool_out thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,322 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,338 | INFO     | [payload] control thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,494 | INFO     | [job] validate thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:12,559 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:13,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:11:41] 2026-03-11 18:11:14,114 | INFO     | [job] queue monitor thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:15,593 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:20,414 | INFO     | job.realtimelogging is not enabled
[2026-03-11 14:11:41] 2026-03-11 18:11:21,419 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 14:11:41] 2026-03-11 18:11:26,545 | INFO     | [monitor] cgroup control has ended
[2026-03-11 14:11:41] 2026-03-11 18:11:27,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125540396816192)>', '<ExcThread(monitor, started 125540040156928)>']
[2026-03-11 14:11:41] 2026-03-11 18:11:32,311 | INFO     | all workflow threads have been joined
[2026-03-11 14:11:41] 2026-03-11 18:11:32,311 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 14:11:41] 2026-03-11 18:11:32,311 | INFO     | traces error code: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:32,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 14:11:41] 2026-03-11 18:11:41,082 | INFO     | PID=877296 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 14:11:41] 2026-03-11 18:11:41,082 | INFO     | .. there are 3 such processes running
[2026-03-11 14:11:41] 2026-03-11 18:11:41,083 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 14:11:41] 2026-03-11 18:11:41,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 14:11:41] 2026-03-11 18:11:41,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 14:11:41] 2026-03-11 18:11:41,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 14:11:41] 2026-03-11 18:11:41,083 | INFO     | [monitor] control thread has ended
[2026-03-11 14:11:41] 2026-03-11 18:11:41,171 [wrapper] ==== pilot stdout END ====
[2026-03-11 14:11:41] 2026-03-11 18:11:41,173 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 14:11:41] 2026-03-11 18:11:41,175 [wrapper] pilotpid: 877296
[2026-03-11 14:11:41] 2026-03-11 18:11:41,176 [wrapper] Pilot exit status: 0
[2026-03-11 14:11:41] 2026-03-11 18:11:41,183 [wrapper] pandaids: 7049664181
[2026-03-11 14:11:41] 2026-03-11 18:11:41,205 [wrapper] cleanup supervisor_pilot  965093 877297
[2026-03-11 14:11:41] 2026-03-11 18:11:41,207 [wrapper] Test setup, not cleaning
[2026-03-11 14:11:41] 2026-03-11 18:11:41,209 [wrapper] apfmon messages muted
[2026-03-11 14:11:41] 2026-03-11 18:11:41,211 [wrapper] ==== wrapper stdout END ====
[2026-03-11 14:11:41] 2026-03-11 18:11:41,213 [wrapper] ==== wrapper stderr END ====
[2026-03-11 14:11:41]  *** Error codes and diagnostics ***
[2026-03-11 14:11:41]     "exeErrorCode": 0,
[2026-03-11 14:11:41]     "exeErrorDiag": "",
[2026-03-11 14:11:41]     "pilotErrorCode": 0,
[2026-03-11 14:11:41]     "pilotErrorDiag": "",
[2026-03-11 14:11:41]  *** Listing of results directory ***
[2026-03-11 14:11:41] total 488892
[2026-03-11 14:11:41] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 11 05:02 pilot3.tar.gz
[2026-03-11 14:11:41] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 11 05:38 queuedata.json
[2026-03-11 14:11:41] -rwx------ 1 whitlerd whitlerd     36322 Mar 11 05:39 runpilot2-wrapper.sh
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 11 09:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 14:11:41] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 11 09:24 run_atlas
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 11 09:24 job.xml
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd 228901736 Mar 11 09:24 EVNT.48966930._000120.pool.root.1
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 09:24 start_atlas.sh
[2026-03-11 14:11:41] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 11 09:24 shared
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd    597534 Mar 11 09:24 input.tar.gz
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 11 09:24 init_data.xml
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 09:24 boinc_setup_complete
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 09:24 boinc_lockfile
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd      2563 Mar 11 09:24 pandaJob.out
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd   1007015 Mar 11 09:24 agis_schedconf.cvmfs.json
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd       433 Mar 11 09:24 workernode_map.json
[2026-03-11 14:11:41] drwx------ 5 whitlerd whitlerd      4096 Mar 11 09:24 pilot3
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd 261937087 Mar 11 14:10 HITS.48966932._003049.pool.root.1
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd       530 Mar 11 14:10 boinc_task_state.xml
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd      1032 Mar 11 14:10 memory_monitor_summary.json
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd   1511578 Mar 11 14:11 agis_ddmendpoints.agis.ALL.json
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd    447972 Mar 11 14:11 log.48966932._003049.job.log.tgz.1
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd      6360 Mar 11 14:11 heartbeat.json
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 14:11 boinc_mmap_file
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 11 14:11 wrapper_checkpoint.txt
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd       821 Mar 11 14:11 pilotlog.txt
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd        95 Mar 11 14:11 pilot_heartbeat.json
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd   2478151 Mar 11 14:11 log.48966932._003049.job.log.1
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd       357 Mar 11 14:11 output.list
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 14:11 runtime_log
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd   2938880 Mar 11 14:11 result.tar.gz
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd      9055 Mar 11 14:11 runtime_log.err
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd       660 Mar 11 14:11 ABmNDm1CVK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPMgLDmvs1AVo.diag
[2026-03-11 14:11:41] -rw-rw-r-- 1 whitlerd whitlerd     21120 Mar 11 14:11 stderr.txt
[2026-03-11 14:11:41] HITS file was successfully produced:
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd 261937087 Mar 11 14:10 shared/HITS.pool.root.1
[2026-03-11 14:11:41]  *** Contents of shared directory: ***
[2026-03-11 14:11:41] total 482820
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd 228901736 Mar 11 09:24 ATLAS.root_0
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 09:24 start_atlas.sh
[2026-03-11 14:11:41] -rw-r--r-- 2 whitlerd whitlerd    597534 Mar 11 09:24 input.tar.gz
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd 261937087 Mar 11 14:10 HITS.pool.root.1
[2026-03-11 14:11:41] -rw------- 1 whitlerd whitlerd   2938880 Mar 11 14:11 result.tar.gz
14:11:42 (873502): run_atlas exited; CPU time 67573.491524
14:11:42 (873502): called boinc_finish(0)

</stderr_txt>
]]>

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