Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:13:26 (755): wrapper (7.7.26015): starting
09:13:26 (755): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 09:13:26] Arguments: --nthreads 8
[2026-03-11 09:13:26] Threads: 8
[2026-03-11 09:13:26] Checking for CVMFS
[2026-03-11 09:13:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 09:13:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 09:13:26] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 09:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 09:13:26] 2.11.2.0 28294 268942 152752 157155 2 50 15528122 18432000 1009 130560 0 173317547 99.982 9971457 26188 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 09:13:26] CVMFS is ok
[2026-03-11 09:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 09:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 09:13:26] Further information can be found at the LHC@home message board.
[2026-03-11 09:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 09:13:26] Checking for apptainer binary...
[2026-03-11 09:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 09:13:26] Running /usr/bin/apptainer --version
[2026-03-11 09:13:26] apptainer version 1.3.2-1.el7
[2026-03-11 09:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 09:13:27] c-206-25.aglt2.org
[2026-03-11 09:13:27] apptainer works
[2026-03-11 09:13:27] Set ATHENA_PROC_NUMBER=8
[2026-03-11 09:13:27] Set ATHENA_CORE_NUMBER=8
[2026-03-11 09:13:27] Starting ATLAS job with PandaID=7036240420
[2026-03-11 09:13:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 12:31:06]  *** The last 200 lines of the pilot log: ***
[2026-03-11 12:31:06] 2026-03-11 16:30:25,168 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,168 | INFO     | log transfer has been attempted: DONE
[2026-03-11 12:31:06] 2026-03-11 16:30:25,168 | INFO     | job 7036240420 has finished - writing final server update
[2026-03-11 12:31:06] 2026-03-11 16:30:25,168 | INFO     | total number of processed events: 400 (read)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,173 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7036240420/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,174 | INFO     | extracted standard info from prmon json
[2026-03-11 12:31:06] 2026-03-11 16:30:25,174 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 12:31:06] 2026-03-11 16:30:25,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 12:31:06] 2026-03-11 16:30:25,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 12:31:06] 2026-03-11 16:30:25,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 12:31:06] 2026-03-11 16:30:25,180 | INFO     | fitting pss+swap vs Time
[2026-03-11 12:31:06] 2026-03-11 16:30:25,181 | INFO     | sum of square deviations: 2263977332.5
[2026-03-11 12:31:06] 2026-03-11 16:30:25,182 | INFO     | sum of deviations: 19678333887.5
[2026-03-11 12:31:06] 2026-03-11 16:30:25,183 | INFO     | mean x: 1773240727.5
[2026-03-11 12:31:06] 2026-03-11 16:30:25,183 | INFO     | mean y: 2478165.8402061854
[2026-03-11 12:31:06] 2026-03-11 16:30:25,183 | INFO     | intersect: -15410407200.872452
[2026-03-11 12:31:06] 2026-03-11 16:30:25,184 | INFO     | chi2: 2.0620383420876993
[2026-03-11 12:31:06] 2026-03-11 16:30:25,184 | INFO     | sum of square deviations: 2093397390.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,186 | INFO     | sum of deviations: 31807319853.000004
[2026-03-11 12:31:06] 2026-03-11 16:30:25,186 | INFO     | mean x: 1773240575.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,186 | INFO     | mean y: 2488769.1375661376
[2026-03-11 12:31:06] 2026-03-11 16:30:25,186 | INFO     | intersect: -26940331745.863956
[2026-03-11 12:31:06] 2026-03-11 16:30:25,187 | INFO     | chi2: 1.2897029864137268
[2026-03-11 12:31:06] 2026-03-11 16:30:25,187 | INFO     | current chi2=1.2897029864137268 (change=37.45494639503288 %)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,187 | INFO     | sum of square deviations: 1931608310.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,189 | INFO     | sum of deviations: 30855825566.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,189 | INFO     | mean x: 1773240422.5
[2026-03-11 12:31:06] 2026-03-11 16:30:25,189 | INFO     | mean y: 2487872.0760869565
[2026-03-11 12:31:06] 2026-03-11 16:30:25,190 | INFO     | intersect: -28323543280.29566
[2026-03-11 12:31:06] 2026-03-11 16:30:25,190 | INFO     | chi2: 1.2900401329952655
[2026-03-11 12:31:06] 2026-03-11 16:30:25,190 | INFO     | current chi2=1.2900401329952655 (change=-0.026141412797392904 %)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,190 | INFO     | right removable region: 183
[2026-03-11 12:31:06] 2026-03-11 16:30:25,191 | INFO     | sum of square deviations: 2093397390.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,192 | INFO     | sum of deviations: -8501951067.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,193 | INFO     | mean x: 1773240880.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,193 | INFO     | mean y: 2503103.2645502645
[2026-03-11 12:31:06] 2026-03-11 16:30:25,193 | INFO     | intersect: 7204196992.719538
[2026-03-11 12:31:06] 2026-03-11 16:30:25,193 | INFO     | chi2: 0.8098217531516327
[2026-03-11 12:31:06] 2026-03-11 16:30:25,194 | INFO     | current chi2=0.8098217531516327 (change=60.727124388398465 %)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,194 | INFO     | sum of square deviations: 1931608310.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,196 | INFO     | sum of deviations: -11317274368.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,196 | INFO     | mean x: 1773241032.5
[2026-03-11 12:31:06] 2026-03-11 16:30:25,196 | INFO     | mean y: 2505721.336956522
[2026-03-11 12:31:06] 2026-03-11 16:30:25,196 | INFO     | intersect: 10391907745.289785
[2026-03-11 12:31:06] 2026-03-11 16:30:25,197 | INFO     | chi2: 0.7914669515495333
[2026-03-11 12:31:06] 2026-03-11 16:30:25,197 | INFO     | current chi2=0.7914669515495333 (change=2.2665236554423185 %)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,197 | INFO     | left removable region: 20
[2026-03-11 12:31:06] 2026-03-11 16:30:25,197 | INFO     | sum of square deviations: 1342841922.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,199 | INFO     | sum of deviations: 138810380.00000006
[2026-03-11 12:31:06] 2026-03-11 16:30:25,199 | INFO     | mean x: 1773241002.0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,199 | INFO     | mean y: 2518333.9509202456
[2026-03-11 12:31:06] 2026-03-11 16:30:25,199 | INFO     | intersect: -180782658.7322683
[2026-03-11 12:31:06] 2026-03-11 16:30:25,200 | INFO     | chi2: 0.0014940430291120574
[2026-03-11 12:31:06] 2026-03-11 16:30:25,200 | INFO     | current memory leak: 0.10 B/s (using 163 data points, chi2=0.00)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,200 | INFO     | could have reported an average CPU frequency of 2023 MHz (10 samples)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | ..............................
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | . Timing measurements:
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | . get job = 0 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | . initial setup = 5 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | . payload setup = 4 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,201 | INFO     | . stage-in = 0 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,202 | INFO     | . payload execution = 11778 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,202 | INFO     | . stage-out = 2 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,202 | INFO     | . log creation = 0 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,202 | INFO     | ..............................
[2026-03-11 12:31:06] 2026-03-11 16:30:25,355 | INFO     | 
[2026-03-11 12:31:06] 2026-03-11 16:30:25,355 | INFO     | job summary report
[2026-03-11 12:31:06] 2026-03-11 16:30:25,355 | INFO     | --------------------------------------------------
[2026-03-11 12:31:06] 2026-03-11 16:30:25,355 | INFO     | PanDA job id: 7036240420
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | task id: 48868979
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | errors: (none)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | pilot state: finished 
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | transexitcode: 0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,356 | INFO     | exeerrorcode: 0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | exeerrordiag: 
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | exitcode: 0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | exitmsg: OK
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | cpuconsumptiontime: 90367 s
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | nevents: 400
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | neventsw: 0
[2026-03-11 12:31:06] 2026-03-11 16:30:25,357 | INFO     | pid: 9165
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | pgrp: 9165
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | corecount: 8
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | event service: False
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | sizes: {0: 2280269, 11: 2280269, 11786: 2309804, 11790: 2318858, 11792: 2318996}
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | --------------------------------------------------
[2026-03-11 12:31:06] 2026-03-11 16:30:25,358 | INFO     | 
[2026-03-11 12:31:06] 2026-03-11 16:30:25,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-11 12:31:06] 2026-03-11 16:30:25,379 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,380 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,380 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,380 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,383 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,383 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 12:31:06] 2026-03-11 16:30:25,383 | INFO     | job 7036240420 has completed (purged errors)
[2026-03-11 12:31:06] 2026-03-11 16:30:25,383 | INFO     | overall cleanup function is called
[2026-03-11 12:31:06] 2026-03-11 16:30:26,392 | INFO     | --- collectZombieJob: --- 10, [9165]
[2026-03-11 12:31:06] 2026-03-11 16:30:26,406 | INFO     | zombie collector waiting for pid 9165
[2026-03-11 12:31:06] 2026-03-11 16:30:26,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 12:31:06] 2026-03-11 16:30:26,407 | INFO     | collected zombie processes
[2026-03-11 12:31:06] 2026-03-11 16:30:26,407 | INFO     | will attempt to kill all subprocesses of pid=9165
[2026-03-11 12:31:06] 2026-03-11 16:30:26,538 | INFO     | process IDs to be killed: [9165] (in reverse order)
[2026-03-11 12:31:06] 2026-03-11 16:30:26,596 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 12:31:06] 2026-03-11 16:30:26,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 12:31:06] 2026-03-11 16:30:26,601 | INFO     | did not find any defunct processes belonging to 9165
[2026-03-11 12:31:06] 2026-03-11 16:30:26,606 | INFO     | did not find any defunct processes belonging to 9165
[2026-03-11 12:31:06] 2026-03-11 16:30:26,606 | INFO     | ready for new job
[2026-03-11 12:31:06] 2026-03-11 16:30:26,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 12:31:06] 2026-03-11 16:30:26,608 | INFO     | **************************************
[2026-03-11 12:31:06] 2026-03-11 16:30:26,608 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 12:31:06] 2026-03-11 16:30:26,609 | INFO     | **************************************
[2026-03-11 12:31:06] 2026-03-11 16:30:26,609 | INFO     | 
[2026-03-11 12:31:06] 2026-03-11 16:30:26,610 | INFO     | architecture information:
[2026-03-11 12:31:06] 2026-03-11 16:30:26,610 | INFO     | executing command: cat /etc/os-release
[2026-03-11 12:31:06] 2026-03-11 16:30:26,624 | INFO     | cat /etc/os-release:
[2026-03-11 12:31:06] NAME="CentOS Linux"
[2026-03-11 12:31:06] VERSION="7 (Core)"
[2026-03-11 12:31:06] ID="centos"
[2026-03-11 12:31:06] ID_LIKE="rhel fedora"
[2026-03-11 12:31:06] VERSION_ID="7"
[2026-03-11 12:31:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 12:31:06] ANSI_COLOR="0;31"
[2026-03-11 12:31:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 12:31:06] HOME_URL="https://www.centos.org/"
[2026-03-11 12:31:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 12:31:06] 
[2026-03-11 12:31:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 12:31:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 12:31:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 12:31:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 12:31:06] 
[2026-03-11 12:31:06] 2026-03-11 16:30:26,624 | INFO     | **************************************
[2026-03-11 12:31:06] 2026-03-11 16:30:27,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-11 12:31:06] 2026-03-11 16:30:27,144 | INFO     | sufficient remaining disk space (28066185216 B)
[2026-03-11 12:31:06] 2026-03-11 16:30:27,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 12:31:06] 2026-03-11 16:30:27,145 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 12:31:06] 2026-03-11 16:30:27,145 | INFO     | update_server=False
[2026-03-11 12:31:06] 2026-03-11 16:30:27,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 12:31:06] 2026-03-11 16:30:27,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 12:31:06] 2026-03-11 16:30:27,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 12:31:06] 2026-03-11 16:30:27,146 | INFO     | aborting loop
[2026-03-11 12:31:06] 2026-03-11 16:30:27,186 | INFO     | all data control threads have been joined
[2026-03-11 12:31:06] 2026-03-11 16:30:27,796 | INFO     | all job control threads have been joined
[2026-03-11 12:31:06] 2026-03-11 16:30:27,889 | INFO     | all payload control threads have been joined
[2026-03-11 12:31:06] 2026-03-11 16:30:28,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 12:31:06] 2026-03-11 16:30:28,151 | INFO     | [job] queue monitor thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,152 | INFO     | [job] retrieve thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,152 | INFO     | [job] job monitor thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,192 | INFO     | [data] control thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,194 | INFO     | [data] copytool_in thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,375 | INFO     | [payload] validate_post thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,802 | INFO     | [job] control thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,894 | INFO     | [payload] control thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:28,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 12:31:06] 2026-03-11 16:30:29,307 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:29,370 | INFO     | [payload] failed_post thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:29,373 | INFO     | [job] validate thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:29,375 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:29,384 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:29,625 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:30,009 | INFO     | [data] copytool_out thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:32,979 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 12:31:06] 2026-03-11 16:30:56,926 | INFO     | PID=4631 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-11 12:31:06] 2026-03-11 16:30:56,926 | INFO     | .. there are 3 such processes running
[2026-03-11 12:31:06] 2026-03-11 16:30:56,927 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 12:31:06] 2026-03-11 16:30:56,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 12:31:06] 2026-03-11 16:30:56,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 12:31:06] 2026-03-11 16:31:00,269 | INFO     | [monitor] cgroup control has ended
[2026-03-11 12:31:06] 2026-03-11 16:31:01,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835368875840)>', '<ExcThread(monitor, started 139834916062976)>']
[2026-03-11 12:31:06] 2026-03-11 16:31:01,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 12:31:06] 2026-03-11 16:31:01,952 | INFO     | [monitor] control thread has ended
[2026-03-11 12:31:06] 2026-03-11 16:31:06,635 | INFO     | all workflow threads have been joined
[2026-03-11 12:31:06] 2026-03-11 16:31:06,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 12:31:06] 2026-03-11 16:31:06,635 | INFO     | traces error code: 0
[2026-03-11 12:31:06] 2026-03-11 16:31:06,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 12:31:06] 2026-03-11 16:31:06,752 [wrapper] ==== pilot stdout END ====
[2026-03-11 12:31:06] 2026-03-11 16:31:06,755 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 12:31:06] 2026-03-11 16:31:06,757 [wrapper] pilotpid: 4631
[2026-03-11 12:31:06] 2026-03-11 16:31:06,759 [wrapper] Pilot exit status: 0
[2026-03-11 12:31:06] 2026-03-11 16:31:06,769 [wrapper] pandaids: 7036240420
[2026-03-11 12:31:06] 2026-03-11 16:31:06,807 [wrapper] cleanup supervisor_pilot 20361 4632
[2026-03-11 12:31:06] 2026-03-11 16:31:06,809 [wrapper] Test setup, not cleaning
[2026-03-11 12:31:06] 2026-03-11 16:31:06,812 [wrapper] apfmon messages muted
[2026-03-11 12:31:06] 2026-03-11 16:31:06,813 [wrapper] ==== wrapper stdout END ====
[2026-03-11 12:31:06] 2026-03-11 16:31:06,815 [wrapper] ==== wrapper stderr END ====
[2026-03-11 12:31:06]  *** Error codes and diagnostics ***
[2026-03-11 12:31:06]     "exeErrorCode": 0,
[2026-03-11 12:31:06]     "exeErrorDiag": "",
[2026-03-11 12:31:06]     "pilotErrorCode": 0,
[2026-03-11 12:31:06]     "pilotErrorDiag": "",
[2026-03-11 12:31:06]  *** Listing of results directory ***
[2026-03-11 12:31:06] total 503980
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 03:25 pilot3.tar.gz
[2026-03-11 12:31:06] -rwx------ 1 boincer umatlas     36322 Mar  3 03:26 runpilot2-wrapper.sh
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 03:28 queuedata.json
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas       100 Mar 11 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 12:31:06] -rwxr-xr-x 1 boincer umatlas      7986 Mar 11 09:13 run_atlas
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas       105 Mar 11 09:13 job.xml
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas 296487738 Mar 11 09:13 EVNT.48717036._000021.pool.root.1
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 09:13 start_atlas.sh
[2026-03-11 12:31:06] drwxrwx--x 2 boincer umatlas      4096 Mar 11 09:13 shared
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas    597956 Mar 11 09:13 input.tar.gz
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas         0 Mar 11 09:13 boinc_lockfile
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas      2595 Mar 11 09:13 pandaJob.out
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas        57 Mar 11 09:13 setup.sh.local
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas   1007016 Mar 11 09:13 agis_schedconf.cvmfs.json
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas       445 Mar 11 09:13 workernode_map.json
[2026-03-11 12:31:06] drwx------ 5 boincer umatlas      4096 Mar 11 09:13 pilot3
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas 211448810 Mar 11 12:29 HITS.48868979._000518.pool.root.1
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas      5951 Mar 11 12:30 init_data.xml
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas       530 Mar 11 12:30 boinc_task_state.xml
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas      1056 Mar 11 12:30 memory_monitor_summary.json
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas   1511578 Mar 11 12:30 agis_ddmendpoints.agis.ALL.json
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas    438132 Mar 11 12:30 log.48868979._000518.job.log.tgz.1
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas      6419 Mar 11 12:30 heartbeat.json
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas      8192 Mar 11 12:30 boinc_mmap_file
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas        28 Mar 11 12:30 wrapper_checkpoint.txt
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas        95 Mar 11 12:30 pilot_heartbeat.json
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas      4816 Mar 11 12:31 pilotlog.txt
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas   1659682 Mar 11 12:31 log.48868979._000518.job.log.1
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas       357 Mar 11 12:31 output.list
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas       620 Mar 11 12:31 runtime_log
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas   2119680 Mar 11 12:31 result.tar.gz
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas      9342 Mar 11 12:31 runtime_log.err
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas       662 Mar 11 12:31 BNeMDmtGaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDAGLDm2ApPlm.diag
[2026-03-11 12:31:06] -rw-r--r-- 1 boincer umatlas     21001 Mar 11 12:31 stderr.txt
[2026-03-11 12:31:06] HITS file was successfully produced:
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas 211448810 Mar 11 12:29 shared/HITS.pool.root.1
[2026-03-11 12:31:06]  *** Contents of shared directory: ***
[2026-03-11 12:31:06] total 498712
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas 296487738 Mar 11 09:13 ATLAS.root_0
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 09:13 start_atlas.sh
[2026-03-11 12:31:06] -rw-r--r-- 2 boincer umatlas    597956 Mar 11 09:13 input.tar.gz
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas 211448810 Mar 11 12:29 HITS.pool.root.1
[2026-03-11 12:31:06] -rw------- 1 boincer umatlas   2119680 Mar 11 12:31 result.tar.gz
12:31:08 (755): run_atlas exited; CPU time 90509.566235
12:31:08 (755): called boinc_finish(0)

</stderr_txt>
]]>

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