Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:10:58 (31231): wrapper (7.7.26015): starting
00:10:58 (31231): wrapper: running run_atlas (--nthreads 8)
[2026-03-12 00:10:58] Arguments: --nthreads 8
[2026-03-12 00:10:58] Threads: 8
[2026-03-12 00:10:58] Checking for CVMFS
[2026-03-12 00:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 00:11:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 00:11:02] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 00:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 00:11:03] 2.11.2.0 12336 123880 140380 157175 1 53 19146692 25165824 4780 130560 167 53981927 99.827 37551736 1166 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-12 00:11:03] CVMFS is ok
[2026-03-12 00:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 00:11:03] Checking for apptainer binary...
[2026-03-12 00:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 00:11:03] Running /usr/bin/apptainer --version
[2026-03-12 00:11:03] apptainer version 1.3.2-1.el7
[2026-03-12 00:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 00:11:13] cg-vwn469.simple-grid.lan
[2026-03-12 00:11:13] apptainer works
[2026-03-12 00:11:14] Set ATHENA_PROC_NUMBER=8
[2026-03-12 00:11:14] Set ATHENA_CORE_NUMBER=8
[2026-03-12 00:11:14] Starting ATLAS job with PandaID=7036223604
[2026-03-12 00:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 04:45:11]  *** The last 200 lines of the pilot log: ***
[2026-03-12 04:45:11] 2026-03-12 03:44:27,070 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7036223604/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,071 | INFO     | extracted standard info from prmon json
[2026-03-12 04:45:11] 2026-03-12 03:44:27,071 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 04:45:11] 2026-03-12 03:44:27,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 04:45:11] 2026-03-12 03:44:27,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 04:45:11] 2026-03-12 03:44:27,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 04:45:11] 2026-03-12 03:44:27,077 | INFO     | fitting pss+swap vs Time
[2026-03-12 04:45:11] 2026-03-12 03:44:27,078 | INFO     | sum of square deviations: 5449944045.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,080 | INFO     | sum of deviations: 25233878722.999996
[2026-03-12 04:45:11] 2026-03-12 03:44:27,080 | INFO     | mean x: 1773279158.5
[2026-03-12 04:45:11] 2026-03-12 03:44:27,080 | INFO     | mean y: 2479553.1615384617
[2026-03-12 04:45:11] 2026-03-12 03:44:27,080 | INFO     | intersect: -8208010473.550744
[2026-03-12 04:45:11] 2026-03-12 03:44:27,081 | INFO     | chi2: 7.812678507842497
[2026-03-12 04:45:11] 2026-03-12 03:44:27,081 | INFO     | sum of square deviations: 5141528960.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,084 | INFO     | sum of deviations: 62225956039.99999
[2026-03-12 04:45:11] 2026-03-12 03:44:27,088 | INFO     | mean x: 1773279006.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,088 | INFO     | mean y: 2497625.6039215685
[2026-03-12 04:45:11] 2026-03-12 03:44:27,088 | INFO     | intersect: -21458819101.864418
[2026-03-12 04:45:11] 2026-03-12 03:44:27,089 | INFO     | chi2: 6.0975535016402995
[2026-03-12 04:45:11] 2026-03-12 03:44:27,089 | INFO     | current chi2=6.0975535016402995 (change=21.953098472956828 %)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,089 | INFO     | right removable region: 254
[2026-03-12 04:45:11] 2026-03-12 03:44:27,089 | INFO     | sum of square deviations: 5141528960.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,092 | INFO     | sum of deviations: -63227336127.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,092 | INFO     | mean x: 1773279311.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,092 | INFO     | mean y: 2523258.933333333
[2026-03-12 04:45:11] 2026-03-12 03:44:27,092 | INFO     | intersect: 21809213042.443172
[2026-03-12 04:45:11] 2026-03-12 03:44:27,092 | INFO     | chi2: 3.353813967240527
[2026-03-12 04:45:11] 2026-03-12 03:44:27,093 | INFO     | current chi2=3.353813967240527 (change=57.072162077654774 %)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,093 | INFO     | sum of square deviations: 4844974562.5
[2026-03-12 04:45:11] 2026-03-12 03:44:27,095 | INFO     | sum of deviations: -103138116129.00002
[2026-03-12 04:45:11] 2026-03-12 03:44:27,095 | INFO     | mean x: 1773279463.5
[2026-03-12 04:45:11] 2026-03-12 03:44:27,096 | INFO     | mean y: 2543642.216
[2026-03-12 04:45:11] 2026-03-12 03:44:27,096 | INFO     | intersect: 37751493791.7626
[2026-03-12 04:45:11] 2026-03-12 03:44:27,096 | INFO     | chi2: 2.115186525610982
[2026-03-12 04:45:11] 2026-03-12 03:44:27,096 | INFO     | current chi2=2.115186525610982 (change=36.93190659136861 %)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,097 | INFO     | sum of square deviations: 4560048290.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,099 | INFO     | sum of deviations: -101072189662.00002
[2026-03-12 04:45:11] 2026-03-12 03:44:27,099 | INFO     | mean x: 1773279616.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,099 | INFO     | mean y: 2542506.0653061224
[2026-03-12 04:45:11] 2026-03-12 03:44:27,099 | INFO     | intersect: 39306787170.56875
[2026-03-12 04:45:11] 2026-03-12 03:44:27,100 | INFO     | chi2: 2.0983646355591876
[2026-03-12 04:45:11] 2026-03-12 03:44:27,100 | INFO     | current chi2=2.0983646355591876 (change=0.795291093627554 %)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,100 | INFO     | left removable region: 30
[2026-03-12 04:45:11] 2026-03-12 03:44:27,100 | INFO     | sum of square deviations: 3485088600.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,102 | INFO     | sum of deviations: -40694290049.0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,102 | INFO     | mean x: 1773279890.5
[2026-03-12 04:45:11] 2026-03-12 03:44:27,102 | INFO     | mean y: 2549193.0714285714
[2026-03-12 04:45:11] 2026-03-12 03:44:27,102 | INFO     | intersect: 20708584099.060894
[2026-03-12 04:45:11] 2026-03-12 03:44:27,103 | INFO     | chi2: 0.1861863881118717
[2026-03-12 04:45:11] 2026-03-12 03:44:27,103 | INFO     | current memory leak: -11.68 B/s (using 224 data points, chi2=0.19)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | ..............................
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . Timing measurements:
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . get job = 0 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . initial setup = 107 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . payload setup = 125 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . stage-in = 0 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . payload execution = 15927 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . stage-out = 3 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,104 | INFO     | . log creation = 1 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,105 | INFO     | ..............................
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | 
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | job summary report
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | --------------------------------------------------
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | PanDA job id: 7036223604
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | task id: 48878057
[2026-03-12 04:45:11] 2026-03-12 03:44:27,264 | INFO     | errors: (none)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | pilot state: finished 
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | transexitcode: 0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | exeerrorcode: 0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | exeerrordiag: 
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | exitcode: 0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | exitmsg: OK
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | cpuconsumptiontime: 61781 s
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | nevents: 400
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | neventsw: 0
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | pid: 7368
[2026-03-12 04:45:11] 2026-03-12 03:44:27,265 | INFO     | pgrp: 7368
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | corecount: 8
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | event service: False
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | sizes: {0: 2279834, 1: 2280295, 12: 2280295, 16056: 2311636, 16059: 2320634, 16060: 2320690, 16061: 2321012}
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | --------------------------------------------------
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | 
[2026-03-12 04:45:11] 2026-03-12 03:44:27,266 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-12 04:45:11] 2026-03-12 03:44:27,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,386 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 04:45:11] 2026-03-12 03:44:27,387 | INFO     | job 7036223604 has completed (purged errors)
[2026-03-12 04:45:11] 2026-03-12 03:44:27,387 | INFO     | overall cleanup function is called
[2026-03-12 04:45:11] 2026-03-12 03:44:28,396 | INFO     | --- collectZombieJob: --- 10, [7368]
[2026-03-12 04:45:11] 2026-03-12 03:44:28,396 | INFO     | zombie collector waiting for pid 7368
[2026-03-12 04:45:11] 2026-03-12 03:44:28,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 04:45:11] 2026-03-12 03:44:28,396 | INFO     | collected zombie processes
[2026-03-12 04:45:11] 2026-03-12 03:44:28,396 | INFO     | will attempt to kill all subprocesses of pid=7368
[2026-03-12 04:45:11] 2026-03-12 03:44:28,505 | INFO     | process IDs to be killed: [7368] (in reverse order)
[2026-03-12 04:45:11] 2026-03-12 03:44:29,076 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 04:45:11] 2026-03-12 03:44:29,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 04:45:11] 2026-03-12 03:44:29,080 | INFO     | did not find any defunct processes belonging to 7368
[2026-03-12 04:45:11] 2026-03-12 03:44:29,083 | INFO     | did not find any defunct processes belonging to 7368
[2026-03-12 04:45:11] 2026-03-12 03:44:29,083 | INFO     | ready for new job
[2026-03-12 04:45:11] 2026-03-12 03:44:29,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 04:45:11] 2026-03-12 03:44:29,085 | INFO     | **************************************
[2026-03-12 04:45:11] 2026-03-12 03:44:29,085 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 04:45:11] 2026-03-12 03:44:29,085 | INFO     | **************************************
[2026-03-12 04:45:11] 2026-03-12 03:44:29,086 | INFO     | 
[2026-03-12 04:45:11] 2026-03-12 03:44:29,086 | INFO     | pilot is running in a VM
[2026-03-12 04:45:11] 2026-03-12 03:44:29,086 | INFO     | architecture information:
[2026-03-12 04:45:11] 2026-03-12 03:44:29,092 | INFO     | executing command: cat /etc/os-release
[2026-03-12 04:45:11] 2026-03-12 03:44:29,369 | INFO     | cat /etc/os-release:
[2026-03-12 04:45:11] NAME="CentOS Linux"
[2026-03-12 04:45:11] VERSION="7 (Core)"
[2026-03-12 04:45:11] ID="centos"
[2026-03-12 04:45:11] ID_LIKE="rhel fedora"
[2026-03-12 04:45:11] VERSION_ID="7"
[2026-03-12 04:45:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 04:45:11] ANSI_COLOR="0;31"
[2026-03-12 04:45:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 04:45:11] HOME_URL="https://www.centos.org/"
[2026-03-12 04:45:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 04:45:11] 
[2026-03-12 04:45:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 04:45:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 04:45:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 04:45:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 04:45:11] 
[2026-03-12 04:45:11] 2026-03-12 03:44:29,369 | INFO     | **************************************
[2026-03-12 04:45:11] 2026-03-12 03:44:29,872 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-12 04:45:11] 2026-03-12 03:44:30,074 | INFO     | sufficient remaining disk space (497108910080 B)
[2026-03-12 04:45:11] 2026-03-12 03:44:30,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 04:45:11] 2026-03-12 03:44:30,075 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 04:45:11] 2026-03-12 03:44:30,075 | INFO     | update_server=False
[2026-03-12 04:45:11] 2026-03-12 03:44:30,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 04:45:11] 2026-03-12 03:44:30,224 | INFO     | all job control threads have been joined
[2026-03-12 04:45:11] 2026-03-12 03:44:30,284 | INFO     | all data control threads have been joined
[2026-03-12 04:45:11] 2026-03-12 03:44:30,288 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-12 04:45:11] 2026-03-12 03:44:30,288 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-12 04:45:11] 2026-03-12 03:44:30,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:45:11] 2026-03-12 03:44:30,288 | INFO     | will abort loop
[2026-03-12 04:45:11] 2026-03-12 03:44:30,893 | INFO     | all payload control threads have been joined
[2026-03-12 04:45:11] 2026-03-12 03:44:31,080 | INFO     | [job] retrieve thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 04:45:11] 2026-03-12 03:44:31,230 | INFO     | [job] control thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,290 | INFO     | [data] control thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,293 | INFO     | [job] job monitor thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,414 | INFO     | [payload] validate_post thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,704 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,899 | INFO     | [payload] control thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:31,983 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:32,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 04:45:11] 2026-03-12 03:44:32,213 | INFO     | [data] copytool_in thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:32,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 04:45:11] 2026-03-12 03:44:32,271 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:32,299 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:32,314 | INFO     | [job] validate thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:32,489 | INFO     | [payload] failed_post thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:33,223 | INFO     | [data] copytool_out thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:33,274 | INFO     | [job] queue monitor thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:36,087 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 04:45:11] 2026-03-12 03:44:50,561 [wrapper] supervise_pilot (15 min periods counter: 19)
[2026-03-12 04:45:11] 2026-03-12 03:44:59,801 | INFO     | PID=2892 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-12 04:45:11] 2026-03-12 03:44:59,801 | INFO     | .. there are 9 such processes running
[2026-03-12 04:45:11] 2026-03-12 03:44:59,801 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 04:45:11] 2026-03-12 03:44:59,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 04:45:11] 2026-03-12 03:44:59,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 04:45:11] 2026-03-12 03:45:00,748 | INFO     | [monitor] cgroup control has ended
[2026-03-12 04:45:11] 2026-03-12 03:45:02,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895223846720)>', '<ExcThread(monitor, started 139894626166528)>']
[2026-03-12 04:45:11] 2026-03-12 03:45:02,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 04:45:11] 2026-03-12 03:45:02,820 | INFO     | [monitor] control thread has ended
[2026-03-12 04:45:11] 2026-03-12 03:45:07,283 | INFO     | all workflow threads have been joined
[2026-03-12 04:45:11] 2026-03-12 03:45:07,283 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 04:45:11] 2026-03-12 03:45:07,283 | INFO     | traces error code: 0
[2026-03-12 04:45:11] 2026-03-12 03:45:07,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 04:45:11] 2026-03-12 03:45:07,690 [wrapper] ==== pilot stdout END ====
[2026-03-12 04:45:11] 2026-03-12 03:45:07,743 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 04:45:11] 2026-03-12 03:45:07,815 [wrapper] pilotpid: 2892
[2026-03-12 04:45:11] 2026-03-12 03:45:07,891 [wrapper] Pilot exit status: 0
[2026-03-12 04:45:11] 2026-03-12 03:45:08,326 [wrapper] pandaids: 7036223604
[2026-03-12 04:45:11] 2026-03-12 03:45:09,057 [wrapper] cleanup supervisor_pilot 16204 2893
[2026-03-12 04:45:11] 2026-03-12 03:45:09,148 [wrapper] Test setup, not cleaning
[2026-03-12 04:45:11] 2026-03-12 03:45:09,281 [wrapper] apfmon messages muted
[2026-03-12 04:45:11] 2026-03-12 03:45:09,409 [wrapper] ==== wrapper stdout END ====
[2026-03-12 04:45:11] 2026-03-12 03:45:09,470 [wrapper] ==== wrapper stderr END ====
[2026-03-12 04:45:11]  *** Error codes and diagnostics ***
[2026-03-12 04:45:11]     "exeErrorCode": 0,
[2026-03-12 04:45:11]     "exeErrorDiag": "",
[2026-03-12 04:45:11]     "pilotErrorCode": 0,
[2026-03-12 04:45:11]     "pilotErrorDiag": "",
[2026-03-12 04:45:11]  *** Listing of results directory ***
[2026-03-12 04:45:11] total 505492
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-12 04:45:11] -rwx------. 1 boinc boinc     36322 Mar  3 09:26 runpilot2-wrapper.sh
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc      5111 Mar  3 09:26 queuedata.json
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc       100 Mar 12 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 04:45:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 00:10 run_atlas
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc       105 Mar 12 00:10 job.xml
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc 294318514 Mar 12 00:10 EVNT.48717157._000012.pool.root.1
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc    597943 Mar 12 00:10 input.tar.gz
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc      6392 Mar 12 00:10 init_data.xml
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc     15845 Mar 12 00:10 start_atlas.sh
[2026-03-12 04:45:11] drwxrwx--x. 2 boinc boinc        68 Mar 12 00:10 shared
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc         0 Mar 12 00:10 boinc_lockfile
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc      2593 Mar 12 00:11 pandaJob.out
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc       415 Mar 12 00:16 workernode_map.json
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc   1006243 Mar 12 00:16 agis_schedconf.cvmfs.json
[2026-03-12 04:45:11] drwx------. 5 boinc boinc      4096 Mar 12 00:16 pilot3
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc 213965457 Mar 12 04:43 HITS.48878057._000281.pool.root.1
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc       531 Mar 12 04:43 boinc_task_state.xml
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc        95 Mar 12 04:44 pilot_heartbeat.json
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc      1016 Mar 12 04:44 memory_monitor_summary.json
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc   1511578 Mar 12 04:44 agis_ddmendpoints.agis.ALL.json
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc    476516 Mar 12 04:44 log.48878057._000281.job.log.tgz.1
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc      6315 Mar 12 04:44 heartbeat.json
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc      5065 Mar 12 04:45 pilotlog.txt
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc        28 Mar 12 04:45 wrapper_checkpoint.txt
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc      8192 Mar 12 04:45 boinc_mmap_file
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc   2233233 Mar 12 04:45 log.48878057._000281.job.log.1
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc       357 Mar 12 04:45 output.list
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc       620 Mar 12 04:45 runtime_log
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc   2723840 Mar 12 04:45 result.tar.gz
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc       656 Mar 12 04:45 RymKDm5FaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIzDLDmcgSVtm.diag
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc      8816 Mar 12 04:45 runtime_log.err
[2026-03-12 04:45:11] -rw-r--r--. 1 boinc boinc     20697 Mar 12 04:45 stderr.txt
[2026-03-12 04:45:11] HITS file was successfully produced:
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc 213965457 Mar 12 04:43 shared/HITS.pool.root.1
[2026-03-12 04:45:11]  *** Contents of shared directory: ***
[2026-03-12 04:45:11] total 499636
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc 294318514 Mar 12 00:10 ATLAS.root_0
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc    597943 Mar 12 00:10 input.tar.gz
[2026-03-12 04:45:11] -rw-r--r--. 2 boinc boinc     15845 Mar 12 00:10 start_atlas.sh
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc 213965457 Mar 12 04:43 HITS.pool.root.1
[2026-03-12 04:45:11] -rw-------. 1 boinc boinc   2723840 Mar 12 04:45 result.tar.gz
04:45:13 (31231): run_atlas exited; CPU time 62014.671233
04:45:13 (31231): called boinc_finish(0)

</stderr_txt>
]]>

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