Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:13:40 (3450108): wrapper (7.7.26015): starting
07:13:40 (3450108): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 07:13:40] Arguments: --nthreads 4
[2026-03-13 07:13:40] Threads: 4
[2026-03-13 07:13:40] Checking for CVMFS
[2026-03-13 07:13:40] No cvmfs_config command found, will try listing directly
[2026-03-13 07:13:40] CVMFS is ok
[2026-03-13 07:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 07:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 07:13:40] Further information can be found at the LHC@home message board.
[2026-03-13 07:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 07:13:40] Checking for apptainer binary...
[2026-03-13 07:13:40] which: no apptainer in ((null))
[2026-03-13 07:13:40] apptainer is not installed, using version from CVMFS
[2026-03-13 07:13:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 07:13:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-13 07:13:41] apptainer works
[2026-03-13 07:13:41] Set ATHENA_PROC_NUMBER=4
[2026-03-13 07:13:41] Set ATHENA_CORE_NUMBER=4
[2026-03-13 07:13:41] Starting ATLAS job with PandaID=7049824053
[2026-03-13 07:13:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 11:43:18]  *** The last 200 lines of the pilot log: ***
[2026-03-13 11:43:18] 2026-03-13 10:34:10,141 | INFO     | extracted standard info from prmon json
[2026-03-13 11:43:18] 2026-03-13 10:34:10,152 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 11:43:18] 2026-03-13 10:34:10,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 11:43:18] 2026-03-13 10:34:10,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 11:43:18] 2026-03-13 10:34:10,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 11:43:18] 2026-03-13 10:34:10,158 | INFO     | fitting pss+swap vs Time
[2026-03-13 11:43:18] 2026-03-13 10:34:10,158 | INFO     | sum of square deviations: 5141528960.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,160 | INFO     | sum of deviations: -6506760444.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,160 | INFO     | mean x: 1773390279.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,160 | INFO     | mean y: 2325949.3019607845
[2026-03-13 11:43:18] 2026-03-13 10:34:10,161 | INFO     | intersect: 2246604997.2160125
[2026-03-13 11:43:18] 2026-03-13 10:34:10,161 | INFO     | chi2: 2.223709257783807
[2026-03-13 11:43:18] 2026-03-13 10:34:10,161 | INFO     | sum of square deviations: 4844974562.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,163 | INFO     | sum of deviations: 8545678002.000008
[2026-03-13 11:43:18] 2026-03-13 10:34:10,163 | INFO     | mean x: 1773390126.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,164 | INFO     | mean y: 2333567.744
[2026-03-13 11:43:18] 2026-03-13 10:34:10,164 | INFO     | intersect: -3125612884.2958217
[2026-03-13 11:43:18] 2026-03-13 10:34:10,164 | INFO     | chi2: 1.5303949984558245
[2026-03-13 11:43:18] 2026-03-13 10:34:10,164 | INFO     | current chi2=1.5303949984558245 (change=31.17827822594728 %)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,165 | INFO     | sum of square deviations: 4560048290.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | sum of deviations: 8404168859.99998
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | mean x: 1773389974.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | mean y: 2333491.983673469
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | intersect: -3266024176.2477245
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | chi2: 1.530805691324702
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | current chi2=1.530805691324702 (change=-0.02683574301352237 %)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,167 | INFO     | right removable region: 244
[2026-03-13 11:43:18] 2026-03-13 10:34:10,168 | INFO     | sum of square deviations: 4844974562.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,170 | INFO     | sum of deviations: -42851192007.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,170 | INFO     | mean x: 1773390431.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,170 | INFO     | mean y: 2344469.18
[2026-03-13 11:43:18] 2026-03-13 10:34:10,170 | INFO     | intersect: 15687028238.759602
[2026-03-13 11:43:18] 2026-03-13 10:34:10,170 | INFO     | chi2: 0.767967379721229
[2026-03-13 11:43:18] 2026-03-13 10:34:10,171 | INFO     | current chi2=0.767967379721229 (change=65.46457784294155 %)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,171 | INFO     | sum of square deviations: 4560048290.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,173 | INFO     | sum of deviations: -42653133395.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,173 | INFO     | mean x: 1773390584.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,173 | INFO     | mean y: 2344348.5346938777
[2026-03-13 11:43:18] 2026-03-13 10:34:10,173 | INFO     | intersect: 16590033848.811666
[2026-03-13 11:43:18] 2026-03-13 10:34:10,173 | INFO     | chi2: 0.761784730581113
[2026-03-13 11:43:18] 2026-03-13 10:34:10,174 | INFO     | current chi2=0.761784730581113 (change=0.8050666347781994 %)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,174 | INFO     | left removable region: 20
[2026-03-13 11:43:18] 2026-03-13 10:34:10,174 | INFO     | sum of square deviations: 3485088600.0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,176 | INFO     | sum of deviations: -20816835264.500004
[2026-03-13 11:43:18] 2026-03-13 10:34:10,176 | INFO     | mean x: 1773390553.5
[2026-03-13 11:43:18] 2026-03-13 10:34:10,176 | INFO     | mean y: 2349295.379464286
[2026-03-13 11:43:18] 2026-03-13 10:34:10,176 | INFO     | intersect: 10595015149.507244
[2026-03-13 11:43:18] 2026-03-13 10:34:10,176 | INFO     | chi2: 0.0478857721397849
[2026-03-13 11:43:18] 2026-03-13 10:34:10,177 | INFO     | current memory leak: -5.97 B/s (using 224 data points, chi2=0.05)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,177 | INFO     | could have reported an average CPU frequency of 2509 MHz (12 samples)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,177 | INFO     | ..............................
[2026-03-13 11:43:18] 2026-03-13 10:34:10,177 | INFO     | . Timing measurements:
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . get job = 0 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . initial setup = 21 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . payload setup = 25 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . stage-in = 0 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . payload execution = 15528 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . stage-out = 1 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | . log creation = 0 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,178 | INFO     | ..............................
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | 
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | job summary report
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | --------------------------------------------------
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | PanDA job id: 7049824053
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | task id: 48967011
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | errors: (none)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | pilot state: finished 
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | transexitcode: 0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | exeerrorcode: 0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | exeerrordiag: 
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | exitcode: 0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | exitmsg: OK
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | cpuconsumptiontime: 55613 s
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | nevents: 400
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | neventsw: 0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | pid: 3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | pgrp: 3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:10,334 | INFO     | corecount: 4
[2026-03-13 11:43:18] 2026-03-13 10:34:10,335 | INFO     | event service: False
[2026-03-13 11:43:18] 2026-03-13 10:34:10,335 | INFO     | sizes: {0: 2279820, 1: 2280281, 15557: 2312072, 15558: 2321092, 15560: 2321148, 15562: 2321342}
[2026-03-13 11:43:18] 2026-03-13 10:34:10,335 | INFO     | --------------------------------------------------
[2026-03-13 11:43:18] 2026-03-13 10:34:10,335 | INFO     | 
[2026-03-13 11:43:18] 2026-03-13 10:34:10,335 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-03-13 11:43:18] 2026-03-13 10:34:10,369 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,382 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 11:43:18] 2026-03-13 10:34:10,382 | INFO     | job 7049824053 has completed (purged errors)
[2026-03-13 11:43:18] 2026-03-13 10:34:10,382 | INFO     | overall cleanup function is called
[2026-03-13 11:43:18] 2026-03-13 10:34:10,708 | WARNING  | process 3460249 can no longer be monitored (due to stat problems) - aborting
[2026-03-13 11:43:18] 2026-03-13 10:34:11,009 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 11:43:18] 2026-03-13 10:34:11,379 | INFO     | number of running child processes to parent process 3460249: 1
[2026-03-13 11:43:18] 2026-03-13 10:34:11,379 | INFO     | maximum number of monitored processes: 6
[2026-03-13 11:43:18] 2026-03-13 10:34:11,379 | INFO     | aborting job monitoring since job object (job id=7049824053) has expired
[2026-03-13 11:43:18] 2026-03-13 10:34:11,397 | INFO     | --- collectZombieJob: --- 10, [3460249]
[2026-03-13 11:43:18] 2026-03-13 10:34:11,397 | INFO     | zombie collector waiting for pid 3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:11,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 11:43:18] 2026-03-13 10:34:11,397 | INFO     | collected zombie processes
[2026-03-13 11:43:18] 2026-03-13 10:34:11,397 | INFO     | will attempt to kill all subprocesses of pid=3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:11,793 | INFO     | process IDs to be killed: [3460249] (in reverse order)
[2026-03-13 11:43:18] 2026-03-13 10:34:11,926 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 11:43:18] 2026-03-13 10:34:11,927 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 11:43:18] 2026-03-13 10:34:11,940 | INFO     | did not find any defunct processes belonging to 3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:11,952 | INFO     | did not find any defunct processes belonging to 3460249
[2026-03-13 11:43:18] 2026-03-13 10:34:11,953 | INFO     | ready for new job
[2026-03-13 11:43:18] 2026-03-13 10:34:11,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 11:43:18] 2026-03-13 10:34:11,955 | INFO     | **************************************
[2026-03-13 11:43:18] 2026-03-13 10:34:11,955 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 11:43:18] 2026-03-13 10:34:11,955 | INFO     | **************************************
[2026-03-13 11:43:18] 2026-03-13 10:34:11,955 | INFO     | 
[2026-03-13 11:43:18] 2026-03-13 10:34:11,959 | INFO     | architecture information:
[2026-03-13 11:43:18] 2026-03-13 10:34:11,960 | INFO     | executing command: cat /etc/os-release
[2026-03-13 11:43:18] 2026-03-13 10:34:11,977 | INFO     | cat /etc/os-release:
[2026-03-13 11:43:18] NAME="CentOS Linux"
[2026-03-13 11:43:18] VERSION="7 (Core)"
[2026-03-13 11:43:18] ID="centos"
[2026-03-13 11:43:18] ID_LIKE="rhel fedora"
[2026-03-13 11:43:18] VERSION_ID="7"
[2026-03-13 11:43:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 11:43:18] ANSI_COLOR="0;31"
[2026-03-13 11:43:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 11:43:18] HOME_URL="https://www.centos.org/"
[2026-03-13 11:43:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 11:43:18] 
[2026-03-13 11:43:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 11:43:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 11:43:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 11:43:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 11:43:18] 
[2026-03-13 11:43:18] 2026-03-13 10:34:11,978 | INFO     | **************************************
[2026-03-13 11:43:18] 2026-03-13 10:34:12,480 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-03-13 11:43:18] 2026-03-13 10:34:12,497 | INFO     | sufficient remaining disk space (21583888384 B)
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | INFO     | update_server=False
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 11:43:18] 2026-03-13 10:34:12,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:43:18] 2026-03-13 10:34:12,499 | INFO     | aborting loop
[2026-03-13 11:43:18] 2026-03-13 10:34:12,639 | INFO     | all payload control threads have been joined
[2026-03-13 11:43:18] 2026-03-13 10:34:12,948 | INFO     | all data control threads have been joined
[2026-03-13 11:43:18] 2026-03-13 10:34:13,503 | INFO     | [job] retrieve thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,504 | INFO     | [job] job monitor thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,526 | INFO     | all job control threads have been joined
[2026-03-13 11:43:18] 2026-03-13 10:34:13,544 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,604 | INFO     | [data] copytool_in thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,644 | INFO     | [payload] control thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,671 | INFO     | [payload] failed_post thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,953 | INFO     | [data] control thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:13,981 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,152 | INFO     | [payload] validate_post thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,328 | INFO     | [job] validate thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,423 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,504 | INFO     | [data] copytool_out thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,531 | INFO     | [job] control thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:14,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 11:43:18] 2026-03-13 10:34:15,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 11:43:18] 2026-03-13 10:34:16,353 | INFO     | [job] queue monitor thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:18,573 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 11:43:18] 2026-03-13 10:34:42,727 | INFO     | PID=3454769 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 11:43:18] 2026-03-13 10:34:42,727 | INFO     | .. there are 12 such processes running
[2026-03-13 11:43:18] 2026-03-13 10:34:42,729 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 11:43:18] 2026-03-13 10:34:42,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 11:43:18] 2026-03-13 10:34:42,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 11:43:18] 2026-03-13 10:35:12,561 | INFO     | [monitor] cgroup control has ended
[2026-03-13 11:43:18] 2026-03-13 10:35:13,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22748152584000)>', '<ExcThread(monitor, started 22747916027648)>']
[2026-03-13 11:43:18] 2026-03-13 10:35:14,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 11:43:18] 2026-03-13 10:35:14,892 | INFO     | [monitor] control thread has ended
[2026-03-13 11:43:18] 2026-03-13 10:35:18,928 | INFO     | all workflow threads have been joined
[2026-03-13 11:43:18] 2026-03-13 10:35:18,928 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 11:43:18] 2026-03-13 10:35:18,928 | INFO     | traces error code: 0
[2026-03-13 11:43:18] 2026-03-13 10:35:18,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 11:43:18] 2026-03-13 10:35:19,087 [wrapper] ==== pilot stdout END ====
[2026-03-13 11:43:18] 2026-03-13 10:35:19,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 11:43:18] 2026-03-13 10:35:19,095 [wrapper] pilotpid: 3454769
[2026-03-13 11:43:18] 2026-03-13 10:35:19,099 [wrapper] Pilot exit status: 0
[2026-03-13 11:43:18] 2026-03-13 10:35:19,178 [wrapper] pandaids: 7049824053
[2026-03-13 11:43:18] 2026-03-13 10:35:19,264 [wrapper] cleanup supervisor_pilot 3735725 3454770
[2026-03-13 11:43:18] 2026-03-13 10:35:19,268 [wrapper] Test setup, not cleaning
[2026-03-13 11:43:18] 2026-03-13 10:35:19,270 [wrapper] apfmon messages muted
[2026-03-13 11:43:18] 2026-03-13 10:35:19,273 [wrapper] ==== wrapper stdout END ====
[2026-03-13 11:43:18] 2026-03-13 10:35:19,276 [wrapper] ==== wrapper stderr END ====
[2026-03-13 11:43:18]  *** Error codes and diagnostics ***
[2026-03-13 11:43:18]     "exeErrorCode": 0,
[2026-03-13 11:43:18]     "exeErrorDiag": "",
[2026-03-13 11:43:18]     "pilotErrorCode": 0,
[2026-03-13 11:43:18]     "pilotErrorDiag": "",
[2026-03-13 11:43:18]  *** Listing of results directory ***
[2026-03-13 11:43:18] total 421860
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc    585013 Mar 11 13:15 pilot3.tar.gz
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc      5111 Mar 11 13:16 queuedata.json
[2026-03-13 11:43:18] -rwx------. 1 boinc boinc     36322 Mar 11 13:17 runpilot2-wrapper.sh
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc       100 Mar 13 07:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 11:43:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 07:13 run_atlas
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc       105 Mar 13 07:13 job.xml
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc 217786213 Mar 13 07:13 EVNT.48967008._000496.pool.root.1
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc      6563 Mar 13 07:13 init_data.xml
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:13 start_atlas.sh
[2026-03-13 11:43:18] drwxrwx--x. 2 boinc boinc      4096 Mar 13 07:13 shared
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc    597525 Mar 13 07:13 input.tar.gz
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc         0 Mar 13 07:13 boinc_lockfile
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc      2563 Mar 13 07:13 pandaJob.out
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc   1006514 Mar 13 07:14 agis_schedconf.cvmfs.json
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc       451 Mar 13 07:14 workernode_map.json
[2026-03-13 11:43:18] drwx------. 5 boinc boinc      4096 Mar 13 07:14 pilot3
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc 205049205 Mar 13 11:33 HITS.48967011._012545.pool.root.1
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc       529 Mar 13 11:33 boinc_task_state.xml
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc      1035 Mar 13 11:34 memory_monitor_summary.json
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc   1511578 Mar 13 11:34 agis_ddmendpoints.agis.ALL.json
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc    435808 Mar 13 11:34 log.48967011._012545.job.log.tgz.1
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc      6404 Mar 13 11:34 heartbeat.json
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc        95 Mar 13 11:34 pilot_heartbeat.json
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc      4829 Mar 13 11:35 pilotlog.txt
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc   2172024 Mar 13 11:35 log.48967011._012545.job.log.1
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc       357 Mar 13 11:35 output.list
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc       620 Mar 13 11:35 runtime_log
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc   2621440 Mar 13 11:35 result.tar.gz
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc      9205 Mar 13 11:35 runtime_log.err
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc       665 Mar 13 11:35 fqKKDmBgXK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmffjLDmdtbkOo.diag
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc        27 Mar 13 11:43 wrapper_checkpoint.txt
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc      8192 Mar 13 11:43 boinc_mmap_file
[2026-03-13 11:43:18] -rw-r--r--. 1 boinc boinc     20835 Mar 13 11:43 stderr.txt
[2026-03-13 11:43:18] HITS file was successfully produced:
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc 205049205 Mar 13 11:33 shared/HITS.pool.root.1
[2026-03-13 11:43:18]  *** Contents of shared directory: ***
[2026-03-13 11:43:18] total 416096
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc 217786213 Mar 13 07:13 ATLAS.root_0
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc     15845 Mar 13 07:13 start_atlas.sh
[2026-03-13 11:43:18] -rw-r--r--. 2 boinc boinc    597525 Mar 13 07:13 input.tar.gz
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc 205049205 Mar 13 11:33 HITS.pool.root.1
[2026-03-13 11:43:18] -rw-------. 1 boinc boinc   2621440 Mar 13 11:35 result.tar.gz
11:43:20 (3450108): run_atlas exited; CPU time 56308.341980
11:43:20 (3450108): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN