Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:17:10 (20225): wrapper (7.7.26015): starting
08:17:10 (20225): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 08:17:10] Arguments: --nthreads 8
[2026-03-11 08:17:10] Threads: 8
[2026-03-11 08:17:10] Checking for CVMFS
[2026-03-11 08:17:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 08:17:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 08:17:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 08:17:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 08:17:11] 2.11.2.0 2466 268858 152228 157153 1 50 14876957 18432001 917 130560 0 173420522 99.982 10069229 26698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 08:17:11] CVMFS is ok
[2026-03-11 08:17:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 08:17:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 08:17:11] Further information can be found at the LHC@home message board.
[2026-03-11 08:17:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 08:17:11] Checking for apptainer binary...
[2026-03-11 08:17:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 08:17:11] Running /usr/bin/apptainer --version
[2026-03-11 08:17:11] apptainer version 1.3.2-1.el7
[2026-03-11 08:17:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 08:17:11] c-206-20.aglt2.org
[2026-03-11 08:17:11] apptainer works
[2026-03-11 08:17:12] Set ATHENA_PROC_NUMBER=8
[2026-03-11 08:17:12] Set ATHENA_CORE_NUMBER=8
[2026-03-11 08:17:12] Starting ATLAS job with PandaID=7036240248
[2026-03-11 08:17:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 12:34:57]  *** The last 200 lines of the pilot log: ***
[2026-03-11 12:34:57] 2026-03-11 16:33:50,077 | INFO     | mean y: 2489562.964285714
[2026-03-11 12:34:57] 2026-03-11 16:33:50,077 | INFO     | intersect: -13678992949.369047
[2026-03-11 12:34:57] 2026-03-11 16:33:50,078 | INFO     | chi2: 1.249933448358144
[2026-03-11 12:34:57] 2026-03-11 16:33:50,078 | INFO     | sum of square deviations: 4672638308.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,081 | INFO     | sum of deviations: 37286229015.99999
[2026-03-11 12:34:57] 2026-03-11 16:33:50,081 | INFO     | mean x: 1773238968.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,081 | INFO     | mean y: 2489036.4331983807
[2026-03-11 12:34:57] 2026-03-11 16:33:50,081 | INFO     | intersect: -14147417269.763075
[2026-03-11 12:34:57] 2026-03-11 16:33:50,082 | INFO     | chi2: 1.2503190039256509
[2026-03-11 12:34:57] 2026-03-11 16:33:50,082 | INFO     | current chi2=1.2503190039256509 (change=-0.030846087686781733 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,082 | INFO     | right removable region: 246
[2026-03-11 12:34:57] 2026-03-11 16:33:50,083 | INFO     | sum of square deviations: 4672638308.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,085 | INFO     | sum of deviations: 3756859887.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,085 | INFO     | mean x: 1773239273.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,085 | INFO     | mean y: 2507585.846153846
[2026-03-11 12:34:57] 2026-03-11 16:33:50,086 | INFO     | intersect: -1423199061.163329
[2026-03-11 12:34:57] 2026-03-11 16:33:50,086 | INFO     | chi2: 0.02495904434868987
[2026-03-11 12:34:57] 2026-03-11 16:33:50,086 | INFO     | current chi2=0.02495904434868987 (change=98.00317013826017 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,087 | INFO     | sum of square deviations: 4394577280.5
[2026-03-11 12:34:57] 2026-03-11 16:33:50,089 | INFO     | sum of deviations: 3379414792.500002
[2026-03-11 12:34:57] 2026-03-11 16:33:50,089 | INFO     | mean x: 1773239425.5
[2026-03-11 12:34:57] 2026-03-11 16:33:50,090 | INFO     | mean y: 2507770.9214876033
[2026-03-11 12:34:57] 2026-03-11 16:33:50,090 | INFO     | intersect: -1361107239.7348042
[2026-03-11 12:34:57] 2026-03-11 16:33:50,090 | INFO     | chi2: 0.013621730131915049
[2026-03-11 12:34:57] 2026-03-11 16:33:50,090 | INFO     | current chi2=0.013621730131915049 (change=45.42367110850512 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,091 | INFO     | sum of square deviations: 4127772278.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,093 | INFO     | sum of deviations: 6741725673.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,093 | INFO     | mean x: 1773239578.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,093 | INFO     | mean y: 2505847.4135021097
[2026-03-11 12:34:57] 2026-03-11 16:33:50,094 | INFO     | intersect: -2893655564.178372
[2026-03-11 12:34:57] 2026-03-11 16:33:50,094 | INFO     | chi2: 0.0054966095277375095
[2026-03-11 12:34:57] 2026-03-11 16:33:50,094 | INFO     | current chi2=0.0054966095277375095 (change=59.648227688351994 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,095 | INFO     | sum of square deviations: 3871990738.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,097 | INFO     | sum of deviations: 7781513403.499999
[2026-03-11 12:34:57] 2026-03-11 16:33:50,097 | INFO     | mean x: 1773239730.5
[2026-03-11 12:34:57] 2026-03-11 16:33:50,097 | INFO     | mean y: 2505242.168103448
[2026-03-11 12:34:57] 2026-03-11 16:33:50,098 | INFO     | intersect: -3561162561.8597054
[2026-03-11 12:34:57] 2026-03-11 16:33:50,098 | INFO     | chi2: 0.00042826584683532527
[2026-03-11 12:34:57] 2026-03-11 16:33:50,098 | INFO     | current chi2=0.00042826584683532527 (change=92.20854520092486 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,099 | INFO     | sum of square deviations: 3627000098.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,101 | INFO     | sum of deviations: 7131369517.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,101 | INFO     | mean x: 1773239883.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,101 | INFO     | mean y: 2505646.5066079297
[2026-03-11 12:34:57] 2026-03-11 16:33:50,101 | INFO     | intersect: -3484019996.249205
[2026-03-11 12:34:57] 2026-03-11 16:33:50,102 | INFO     | chi2: 0.00040900362068253387
[2026-03-11 12:34:57] 2026-03-11 16:33:50,102 | INFO     | current chi2=0.00040900362068253387 (change=4.4977264227651625 %)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,102 | INFO     | left removable region: 50
[2026-03-11 12:34:57] 2026-03-11 16:33:50,103 | INFO     | sum of square deviations: 2334722845.0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,104 | INFO     | sum of deviations: 4226349833.5
[2026-03-11 12:34:57] 2026-03-11 16:33:50,105 | INFO     | mean x: 1773240462.5
[2026-03-11 12:34:57] 2026-03-11 16:33:50,105 | INFO     | mean y: 2507259.7806122447
[2026-03-11 12:34:57] 2026-03-11 16:33:50,105 | INFO     | intersect: -3207438858.4458265
[2026-03-11 12:34:57] 2026-03-11 16:33:50,105 | INFO     | chi2: 0.0003470024912456254
[2026-03-11 12:34:57] 2026-03-11 16:33:50,106 | INFO     | current memory leak: 1.81 B/s (using 196 data points, chi2=0.00)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,106 | INFO     | could have reported an average CPU frequency of 2006 MHz (12 samples)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | ..............................
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | . Timing measurements:
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | . get job = 0 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | . initial setup = 5 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | . payload setup = 4 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,107 | INFO     | . stage-in = 0 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,108 | INFO     | . payload execution = 15359 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,108 | INFO     | . stage-out = 2 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,108 | INFO     | . log creation = 0 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,108 | INFO     | ..............................
[2026-03-11 12:34:57] 2026-03-11 16:33:50,263 | INFO     | 
[2026-03-11 12:34:57] 2026-03-11 16:33:50,263 | INFO     | job summary report
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | --------------------------------------------------
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | PanDA job id: 7036240248
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | task id: 48852301
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | errors: (none)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 12:34:57] 2026-03-11 16:33:50,264 | INFO     | pilot state: finished 
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | transexitcode: 0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | exeerrorcode: 0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | exeerrordiag: 
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | exitcode: 0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | exitmsg: OK
[2026-03-11 12:34:57] 2026-03-11 16:33:50,265 | INFO     | cpuconsumptiontime: 117603 s
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | nevents: 400
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | neventsw: 0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | pid: 28578
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | pgrp: 28578
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | corecount: 8
[2026-03-11 12:34:57] 2026-03-11 16:33:50,266 | INFO     | event service: False
[2026-03-11 12:34:57] 2026-03-11 16:33:50,267 | INFO     | sizes: {0: 2280319, 11: 2280319, 15367: 2311549, 15372: 2320603, 15373: 2320741}
[2026-03-11 12:34:57] 2026-03-11 16:33:50,267 | INFO     | --------------------------------------------------
[2026-03-11 12:34:57] 2026-03-11 16:33:50,267 | INFO     | 
[2026-03-11 12:34:57] 2026-03-11 16:33:50,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-11 12:34:57] 2026-03-11 16:33:50,290 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,290 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,292 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,292 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,294 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,294 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 12:34:57] 2026-03-11 16:33:50,294 | INFO     | job 7036240248 has completed (purged errors)
[2026-03-11 12:34:57] 2026-03-11 16:33:50,294 | INFO     | overall cleanup function is called
[2026-03-11 12:34:57] 2026-03-11 16:33:51,302 | INFO     | --- collectZombieJob: --- 10, [28578]
[2026-03-11 12:34:57] 2026-03-11 16:33:51,302 | INFO     | zombie collector waiting for pid 28578
[2026-03-11 12:34:57] 2026-03-11 16:33:51,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 12:34:57] 2026-03-11 16:33:51,302 | INFO     | collected zombie processes
[2026-03-11 12:34:57] 2026-03-11 16:33:51,302 | INFO     | will attempt to kill all subprocesses of pid=28578
[2026-03-11 12:34:57] 2026-03-11 16:33:51,434 | INFO     | process IDs to be killed: [28578] (in reverse order)
[2026-03-11 12:34:57] 2026-03-11 16:33:51,481 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 12:34:57] 2026-03-11 16:33:51,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 12:34:57] 2026-03-11 16:33:51,488 | INFO     | did not find any defunct processes belonging to 28578
[2026-03-11 12:34:57] 2026-03-11 16:33:51,493 | INFO     | did not find any defunct processes belonging to 28578
[2026-03-11 12:34:57] 2026-03-11 16:33:51,493 | INFO     | ready for new job
[2026-03-11 12:34:57] 2026-03-11 16:33:51,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 12:34:57] 2026-03-11 16:33:51,495 | INFO     | **************************************
[2026-03-11 12:34:57] 2026-03-11 16:33:51,495 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 12:34:57] 2026-03-11 16:33:51,496 | INFO     | **************************************
[2026-03-11 12:34:57] 2026-03-11 16:33:51,496 | INFO     | 
[2026-03-11 12:34:57] 2026-03-11 16:33:51,497 | INFO     | architecture information:
[2026-03-11 12:34:57] 2026-03-11 16:33:51,497 | INFO     | executing command: cat /etc/os-release
[2026-03-11 12:34:57] 2026-03-11 16:33:51,511 | INFO     | cat /etc/os-release:
[2026-03-11 12:34:57] NAME="CentOS Linux"
[2026-03-11 12:34:57] VERSION="7 (Core)"
[2026-03-11 12:34:57] ID="centos"
[2026-03-11 12:34:57] ID_LIKE="rhel fedora"
[2026-03-11 12:34:57] VERSION_ID="7"
[2026-03-11 12:34:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 12:34:57] ANSI_COLOR="0;31"
[2026-03-11 12:34:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 12:34:57] HOME_URL="https://www.centos.org/"
[2026-03-11 12:34:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 12:34:57] 
[2026-03-11 12:34:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 12:34:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 12:34:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 12:34:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 12:34:57] 
[2026-03-11 12:34:57] 2026-03-11 16:33:51,512 | INFO     | **************************************
[2026-03-11 12:34:57] 2026-03-11 16:33:52,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-11 12:34:57] 2026-03-11 16:33:52,035 | INFO     | sufficient remaining disk space (28110225408 B)
[2026-03-11 12:34:57] 2026-03-11 16:33:52,035 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 12:34:57] 2026-03-11 16:33:52,035 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 12:34:57] 2026-03-11 16:33:52,036 | INFO     | update_server=False
[2026-03-11 12:34:57] 2026-03-11 16:33:52,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 12:34:57] 2026-03-11 16:33:52,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 12:34:57] 2026-03-11 16:33:52,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 12:34:57] 2026-03-11 16:33:52,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 12:34:57] 2026-03-11 16:33:52,351 | INFO     | aborting loop
[2026-03-11 12:34:57] 2026-03-11 16:33:52,560 | INFO     | all data control threads have been joined
[2026-03-11 12:34:57] 2026-03-11 16:33:53,035 | INFO     | all payload control threads have been joined
[2026-03-11 12:34:57] 2026-03-11 16:33:53,042 | INFO     | [job] retrieve thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,042 | INFO     | [job] queue monitor thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,083 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,356 | INFO     | [job] job monitor thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,376 | INFO     | [payload] validate_post thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,492 | INFO     | [job] validate thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,497 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,575 | INFO     | [data] control thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,597 | INFO     | [data] copytool_in thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:53,739 | INFO     | all job control threads have been joined
[2026-03-11 12:34:57] 2026-03-11 16:33:53,980 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:54,040 | INFO     | [payload] control thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:54,042 | INFO     | [data] copytool_out thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:54,126 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:54,348 | INFO     | [payload] failed_post thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:54,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 12:34:57] 2026-03-11 16:33:54,745 | INFO     | [job] control thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:33:58,551 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 12:34:57] 2026-03-11 16:34:22,080 | INFO     | PID=24187 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-11 12:34:57] 2026-03-11 16:34:22,080 | INFO     | .. there are 3 such processes running
[2026-03-11 12:34:57] 2026-03-11 16:34:22,080 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 12:34:57] 2026-03-11 16:34:22,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 12:34:57] 2026-03-11 16:34:22,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 12:34:57] 2026-03-11 16:34:50,160 | INFO     | [monitor] cgroup control has ended
[2026-03-11 12:34:57] 2026-03-11 16:34:51,803 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520076302144)>', '<ExcThread(monitor, started 140519501977344)>']
[2026-03-11 12:34:57] 2026-03-11 16:34:52,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 12:34:57] 2026-03-11 16:34:52,228 | INFO     | [monitor] control thread has ended
[2026-03-11 12:34:57] 2026-03-11 16:34:56,828 | INFO     | all workflow threads have been joined
[2026-03-11 12:34:57] 2026-03-11 16:34:56,828 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 12:34:57] 2026-03-11 16:34:56,828 | INFO     | traces error code: 0
[2026-03-11 12:34:57] 2026-03-11 16:34:56,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 12:34:57] 2026-03-11 16:34:56,945 [wrapper] ==== pilot stdout END ====
[2026-03-11 12:34:57] 2026-03-11 16:34:56,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 12:34:57] 2026-03-11 16:34:56,950 [wrapper] pilotpid: 24187
[2026-03-11 12:34:57] 2026-03-11 16:34:56,952 [wrapper] Pilot exit status: 0
[2026-03-11 12:34:57] 2026-03-11 16:34:56,960 [wrapper] pandaids: 7036240248
[2026-03-11 12:34:57] 2026-03-11 16:34:56,990 [wrapper] cleanup supervisor_pilot  2049 24188
[2026-03-11 12:34:57] 2026-03-11 16:34:56,993 [wrapper] Test setup, not cleaning
[2026-03-11 12:34:57] 2026-03-11 16:34:56,995 [wrapper] apfmon messages muted
[2026-03-11 12:34:57] 2026-03-11 16:34:56,998 [wrapper] ==== wrapper stdout END ====
[2026-03-11 12:34:57] 2026-03-11 16:34:57,000 [wrapper] ==== wrapper stderr END ====
[2026-03-11 12:34:57]  *** Error codes and diagnostics ***
[2026-03-11 12:34:57]     "exeErrorCode": 0,
[2026-03-11 12:34:57]     "exeErrorDiag": "",
[2026-03-11 12:34:57]     "pilotErrorCode": 0,
[2026-03-11 12:34:57]     "pilotErrorDiag": "",
[2026-03-11 12:34:57]  *** Listing of results directory ***
[2026-03-11 12:34:57] total 424820
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 03:25 pilot3.tar.gz
[2026-03-11 12:34:57] -rwx------ 1 boincer umatlas     36322 Mar  3 03:25 runpilot2-wrapper.sh
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 03:26 queuedata.json
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas       100 Mar 11 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 12:34:57] -rwxr-xr-x 1 boincer umatlas      7986 Mar 11 08:17 run_atlas
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas       105 Mar 11 08:17 job.xml
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas 234156998 Mar 11 08:17 EVNT.48462218._000003.pool.root.1
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 08:17 start_atlas.sh
[2026-03-11 12:34:57] drwxrwx--x 2 boincer umatlas      4096 Mar 11 08:17 shared
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas    597962 Mar 11 08:17 input.tar.gz
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas         0 Mar 11 08:17 boinc_lockfile
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas      2626 Mar 11 08:17 pandaJob.out
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas        57 Mar 11 08:17 setup.sh.local
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas   1007002 Mar 11 08:17 agis_schedconf.cvmfs.json
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas       445 Mar 11 08:17 workernode_map.json
[2026-03-11 12:34:57] drwx------ 5 boincer umatlas      4096 Mar 11 08:17 pilot3
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas      5952 Mar 11 12:27 init_data.xml
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas 191651182 Mar 11 12:33 HITS.48852301._000056.pool.root.1
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas       532 Mar 11 12:33 boinc_task_state.xml
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas        95 Mar 11 12:33 pilot_heartbeat.json
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas      1053 Mar 11 12:33 memory_monitor_summary.json
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas   1511578 Mar 11 12:33 agis_ddmendpoints.agis.ALL.json
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas    472843 Mar 11 12:33 log.48852301._000056.job.log.tgz.1
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas      6416 Mar 11 12:33 heartbeat.json
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas      8192 Mar 11 12:34 boinc_mmap_file
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas        29 Mar 11 12:34 wrapper_checkpoint.txt
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas      4817 Mar 11 12:34 pilotlog.txt
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas   2157385 Mar 11 12:34 log.48852301._000056.job.log.1
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas       357 Mar 11 12:34 output.list
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas       620 Mar 11 12:34 runtime_log
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas   2652160 Mar 11 12:34 result.tar.gz
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas       663 Mar 11 12:34 xn2NDmlFaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQwDLDm7KdSGm.diag
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas      9342 Mar 11 12:34 runtime_log.err
[2026-03-11 12:34:57] -rw-r--r-- 1 boincer umatlas     20861 Mar 11 12:34 stderr.txt
[2026-03-11 12:34:57] HITS file was successfully produced:
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas 191651182 Mar 11 12:33 shared/HITS.pool.root.1
[2026-03-11 12:34:57]  *** Contents of shared directory: ***
[2026-03-11 12:34:57] total 419032
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas 234156998 Mar 11 08:17 ATLAS.root_0
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 08:17 start_atlas.sh
[2026-03-11 12:34:57] -rw-r--r-- 2 boincer umatlas    597962 Mar 11 08:17 input.tar.gz
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas 191651182 Mar 11 12:33 HITS.pool.root.1
[2026-03-11 12:34:57] -rw------- 1 boincer umatlas   2652160 Mar 11 12:34 result.tar.gz
12:34:58 (20225): run_atlas exited; CPU time 117828.253685
12:34:58 (20225): called boinc_finish(0)

</stderr_txt>
]]>

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