Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:51:47 (19839): wrapper (7.7.26015): starting
21:51:47 (19839): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 21:51:47] Arguments: --nthreads 8
[2026-03-11 21:51:47] Threads: 8
[2026-03-11 21:51:47] Checking for CVMFS
[2026-03-11 21:51:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 21:51:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 21:51:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 21:51:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 21:51:50] 2.11.2.0 31778 92016 131452 157170 1 94 24017049 25165824 1081 130560 156 26601415 99.811 18358949 658 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 21:51:50] CVMFS is ok
[2026-03-11 21:51:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 21:51:50] Checking for apptainer binary...
[2026-03-11 21:51:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 21:51:50] Running /usr/bin/apptainer --version
[2026-03-11 21:51:50] apptainer version 1.3.2-1.el7
[2026-03-11 21:51:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 21:52:03] cg-vwn373.simple-grid.lan
[2026-03-11 21:52:03] apptainer works
[2026-03-11 21:52:03] Set ATHENA_PROC_NUMBER=8
[2026-03-11 21:52:03] Set ATHENA_CORE_NUMBER=8
[2026-03-11 21:52:03] Starting ATLAS job with PandaID=7036220243
[2026-03-11 21:52:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 05:40:49]  *** The last 200 lines of the pilot log: ***
[2026-03-12 05:40:49] 2026-03-12 04:40:02,296 | INFO     | total number of processed events: 400 (read)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,298 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7036220243/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,299 | INFO     | extracted standard info from prmon json
[2026-03-12 05:40:49] 2026-03-12 04:40:02,299 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 05:40:49] 2026-03-12 04:40:02,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 05:40:49] 2026-03-12 04:40:02,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 05:40:49] 2026-03-12 04:40:02,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 05:40:49] 2026-03-12 04:40:02,309 | INFO     | fitting pss+swap vs Time
[2026-03-12 05:40:49] 2026-03-12 04:40:02,310 | INFO     | sum of square deviations: 28068247200.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,325 | INFO     | sum of deviations: 291731691750.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,326 | INFO     | mean x: 1773276687.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,326 | INFO     | mean y: 2456281.3474387527
[2026-03-12 05:40:49] 2026-03-12 04:40:02,326 | INFO     | intersect: -18428370700.942543
[2026-03-12 05:40:49] 2026-03-12 04:40:02,327 | INFO     | chi2: 8.185360530229426
[2026-03-12 05:40:49] 2026-03-12 04:40:02,328 | INFO     | sum of square deviations: 27140955395.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,333 | INFO     | sum of deviations: 317856043959.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,334 | INFO     | mean x: 1773276534.5
[2026-03-12 05:40:49] 2026-03-12 04:40:02,334 | INFO     | mean y: 2460533.085585586
[2026-03-12 05:40:49] 2026-03-12 04:40:02,334 | INFO     | intersect: -20764924251.214676
[2026-03-12 05:40:49] 2026-03-12 04:40:02,335 | INFO     | chi2: 7.445825753004968
[2026-03-12 05:40:49] 2026-03-12 04:40:02,335 | INFO     | current chi2=7.445825753004968 (change=9.034846718031243 %)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,335 | INFO     | right removable region: 443
[2026-03-12 05:40:49] 2026-03-12 04:40:02,336 | INFO     | sum of square deviations: 27140955395.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,342 | INFO     | sum of deviations: 133560729820.99997
[2026-03-12 05:40:49] 2026-03-12 04:40:02,342 | INFO     | mean x: 1773276839.5
[2026-03-12 05:40:49] 2026-03-12 04:40:02,342 | INFO     | mean y: 2482284.4324324327
[2026-03-12 05:40:49] 2026-03-12 04:40:02,342 | INFO     | intersect: -8723818813.35161
[2026-03-12 05:40:49] 2026-03-12 04:40:02,343 | INFO     | chi2: 3.4183980537996046
[2026-03-12 05:40:49] 2026-03-12 04:40:02,343 | INFO     | current chi2=3.4183980537996046 (change=58.23766050163472 %)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,349 | INFO     | sum of square deviations: 26234315140.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,355 | INFO     | sum of deviations: 17450343383.000004
[2026-03-12 05:40:49] 2026-03-12 04:40:02,355 | INFO     | mean x: 1773276992.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,355 | INFO     | mean y: 2501794.874715262
[2026-03-12 05:40:49] 2026-03-12 04:40:02,355 | INFO     | intersect: -1177033186.6347487
[2026-03-12 05:40:49] 2026-03-12 04:40:02,356 | INFO     | chi2: 0.9300066522362227
[2026-03-12 05:40:49] 2026-03-12 04:40:02,373 | INFO     | current chi2=0.9300066522362227 (change=72.79407963614695 %)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,373 | INFO     | sum of square deviations: 25348093872.5
[2026-03-12 05:40:49] 2026-03-12 04:40:02,380 | INFO     | sum of deviations: -2161679387.000004
[2026-03-12 05:40:49] 2026-03-12 04:40:02,380 | INFO     | mean x: 1773277144.5
[2026-03-12 05:40:49] 2026-03-12 04:40:02,380 | INFO     | mean y: 2505164.331797235
[2026-03-12 05:40:49] 2026-03-12 04:40:02,380 | INFO     | intersect: 153729815.3838653
[2026-03-12 05:40:49] 2026-03-12 04:40:02,381 | INFO     | chi2: 0.8443301973149965
[2026-03-12 05:40:49] 2026-03-12 04:40:02,381 | INFO     | current chi2=0.8443301973149965 (change=9.212456138374407 %)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,381 | INFO     | left removable region: 30
[2026-03-12 05:40:49] 2026-03-12 04:40:02,382 | INFO     | sum of square deviations: 21843691422.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,388 | INFO     | sum of deviations: 9455282369.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,388 | INFO     | mean x: 1773277419.0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,388 | INFO     | mean y: 2513130.9128329298
[2026-03-12 05:40:49] 2026-03-12 04:40:02,388 | INFO     | intersect: -765069526.7660658
[2026-03-12 05:40:49] 2026-03-12 04:40:02,389 | INFO     | chi2: 0.008210043624693221
[2026-03-12 05:40:49] 2026-03-12 04:40:02,389 | INFO     | current memory leak: 0.43 B/s (using 413 data points, chi2=0.01)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,390 | INFO     | could have reported an average CPU frequency of 1999 MHz (19 samples)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,390 | INFO     | ..............................
[2026-03-12 05:40:49] 2026-03-12 04:40:02,390 | INFO     | . Timing measurements:
[2026-03-12 05:40:49] 2026-03-12 04:40:02,390 | INFO     | . get job = 0 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . initial setup = 120 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . payload setup = 154 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . stage-in = 0 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . payload execution = 27504 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . stage-out = 5 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | . log creation = 1 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,391 | INFO     | ..............................
[2026-03-12 05:40:49] 2026-03-12 04:40:02,600 | INFO     | 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,600 | INFO     | job summary report
[2026-03-12 05:40:49] 2026-03-12 04:40:02,600 | INFO     | --------------------------------------------------
[2026-03-12 05:40:49] 2026-03-12 04:40:02,600 | INFO     | PanDA job id: 7036220243
[2026-03-12 05:40:49] 2026-03-12 04:40:02,600 | INFO     | task id: 48851808
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | errors: (none)
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | pilot state: finished 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | transexitcode: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | exeerrorcode: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | exeerrordiag: 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,601 | INFO     | exitcode: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,606 | INFO     | exitmsg: OK
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | cpuconsumptiontime: 121315 s
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | nevents: 400
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | neventsw: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | pid: 28292
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | pgrp: 28292
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | corecount: 8
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | event service: False
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | sizes: {0: 2279223, 1: 2279909, 2: 2280370, 27663: 2317138, 27668: 2326138, 27669: 2326194, 27670: 2326516}
[2026-03-12 05:40:49] 2026-03-12 04:40:02,607 | INFO     | --------------------------------------------------
[2026-03-12 05:40:49] 2026-03-12 04:40:02,608 | INFO     | 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,608 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-03-12 05:40:49] 2026-03-12 04:40:02,664 | INFO     | PID=23828 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 05:40:49] 2026-03-12 04:40:02,665 | INFO     | .. there are 2 such processes running
[2026-03-12 05:40:49] 2026-03-12 04:40:03,239 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,239 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,239 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,239 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 05:40:49] 2026-03-12 04:40:03,242 | INFO     | job 7036220243 has completed (purged errors)
[2026-03-12 05:40:49] 2026-03-12 04:40:03,242 | INFO     | overall cleanup function is called
[2026-03-12 05:40:49] 2026-03-12 04:40:04,252 | INFO     | --- collectZombieJob: --- 10, [28292]
[2026-03-12 05:40:49] 2026-03-12 04:40:04,253 | INFO     | zombie collector waiting for pid 28292
[2026-03-12 05:40:49] 2026-03-12 04:40:04,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 05:40:49] 2026-03-12 04:40:04,253 | INFO     | collected zombie processes
[2026-03-12 05:40:49] 2026-03-12 04:40:04,253 | INFO     | will attempt to kill all subprocesses of pid=28292
[2026-03-12 05:40:49] 2026-03-12 04:40:04,368 | INFO     | process IDs to be killed: [28292] (in reverse order)
[2026-03-12 05:40:49] 2026-03-12 04:40:05,199 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 05:40:49] 2026-03-12 04:40:05,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 05:40:49] 2026-03-12 04:40:05,202 | INFO     | did not find any defunct processes belonging to 28292
[2026-03-12 05:40:49] 2026-03-12 04:40:05,204 | INFO     | did not find any defunct processes belonging to 28292
[2026-03-12 05:40:49] 2026-03-12 04:40:05,204 | INFO     | ready for new job
[2026-03-12 05:40:49] 2026-03-12 04:40:05,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 05:40:49] 2026-03-12 04:40:05,207 | INFO     | **************************************
[2026-03-12 05:40:49] 2026-03-12 04:40:05,207 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-12 05:40:49] 2026-03-12 04:40:05,207 | INFO     | **************************************
[2026-03-12 05:40:49] 2026-03-12 04:40:05,207 | INFO     | 
[2026-03-12 05:40:49] 2026-03-12 04:40:05,208 | INFO     | pilot is running in a VM
[2026-03-12 05:40:49] 2026-03-12 04:40:05,208 | INFO     | architecture information:
[2026-03-12 05:40:49] 2026-03-12 04:40:05,214 | INFO     | executing command: cat /etc/os-release
[2026-03-12 05:40:49] 2026-03-12 04:40:05,529 | INFO     | cat /etc/os-release:
[2026-03-12 05:40:49] NAME="CentOS Linux"
[2026-03-12 05:40:49] VERSION="7 (Core)"
[2026-03-12 05:40:49] ID="centos"
[2026-03-12 05:40:49] ID_LIKE="rhel fedora"
[2026-03-12 05:40:49] VERSION_ID="7"
[2026-03-12 05:40:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 05:40:49] ANSI_COLOR="0;31"
[2026-03-12 05:40:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 05:40:49] HOME_URL="https://www.centos.org/"
[2026-03-12 05:40:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 05:40:49] 
[2026-03-12 05:40:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 05:40:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 05:40:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 05:40:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 05:40:49] 
[2026-03-12 05:40:49] 2026-03-12 04:40:05,529 | INFO     | **************************************
[2026-03-12 05:40:49] 2026-03-12 04:40:06,033 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-03-12 05:40:49] 2026-03-12 04:40:06,229 | INFO     | sufficient remaining disk space (496699965440 B)
[2026-03-12 05:40:49] 2026-03-12 04:40:06,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 05:40:49] 2026-03-12 04:40:06,230 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 05:40:49] 2026-03-12 04:40:06,230 | INFO     | update_server=False
[2026-03-12 05:40:49] 2026-03-12 04:40:06,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 05:40:49] 2026-03-12 04:40:06,382 | INFO     | all payload control threads have been joined
[2026-03-12 05:40:49] 2026-03-12 04:40:06,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 05:40:49] 2026-03-12 04:40:06,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 05:40:49] 2026-03-12 04:40:06,502 | INFO     | aborting loop
[2026-03-12 05:40:49] 2026-03-12 04:40:06,530 | INFO     | all data control threads have been joined
[2026-03-12 05:40:49] 2026-03-12 04:40:06,539 | INFO     | all job control threads have been joined
[2026-03-12 05:40:49] 2026-03-12 04:40:07,236 | INFO     | [job] retrieve thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,298 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,388 | INFO     | [payload] control thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,508 | INFO     | [job] job monitor thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,536 | INFO     | [data] control thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,545 | INFO     | [job] control thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 05:40:49] 2026-03-12 04:40:07,743 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,856 | INFO     | [job] validate thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,879 | INFO     | [payload] validate_post thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:07,894 | INFO     | [data] copytool_in thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:08,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 05:40:49] 2026-03-12 04:40:08,215 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:08,238 | INFO     | [payload] failed_post thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:08,431 | INFO     | [data] copytool_out thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:08,472 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:08,625 | INFO     | [job] queue monitor thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:12,119 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 05:40:49] 2026-03-12 04:40:34,821 | INFO     | PID=23828 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 05:40:49] 2026-03-12 04:40:34,821 | INFO     | .. there are 2 such processes running
[2026-03-12 05:40:49] 2026-03-12 04:40:34,822 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 05:40:49] 2026-03-12 04:40:34,822 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 05:40:49] 2026-03-12 04:40:34,822 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 05:40:49] 2026-03-12 04:40:37,303 | INFO     | [monitor] cgroup control has ended
[2026-03-12 05:40:49] 2026-03-12 04:40:38,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622073141056)>', '<ExcThread(monitor, started 140621624882944)>']
[2026-03-12 05:40:49] 2026-03-12 04:40:38,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 05:40:49] 2026-03-12 04:40:38,847 | INFO     | [monitor] control thread has ended
[2026-03-12 05:40:49] 2026-03-12 04:40:43,336 | INFO     | all workflow threads have been joined
[2026-03-12 05:40:49] 2026-03-12 04:40:43,337 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 05:40:49] 2026-03-12 04:40:43,337 | INFO     | traces error code: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:43,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 05:40:49] 2026-03-12 04:40:43,583 [wrapper] ==== pilot stdout END ====
[2026-03-12 05:40:49] 2026-03-12 04:40:43,600 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 05:40:49] 2026-03-12 04:40:43,616 [wrapper] pilotpid: 23828
[2026-03-12 05:40:49] 2026-03-12 04:40:43,753 [wrapper] Pilot exit status: 0
[2026-03-12 05:40:49] 2026-03-12 04:40:44,280 [wrapper] pandaids: 7036220243
[2026-03-12 05:40:49] 2026-03-12 04:40:45,394 [wrapper] cleanup supervisor_pilot 20388 23829
[2026-03-12 05:40:49] 2026-03-12 04:40:45,519 [wrapper] Test setup, not cleaning
[2026-03-12 05:40:49] 2026-03-12 04:40:45,641 [wrapper] apfmon messages muted
[2026-03-12 05:40:49] 2026-03-12 04:40:45,753 [wrapper] ==== wrapper stdout END ====
[2026-03-12 05:40:49] 2026-03-12 04:40:45,861 [wrapper] ==== wrapper stderr END ====
[2026-03-12 05:40:49]  *** Error codes and diagnostics ***
[2026-03-12 05:40:49]     "exeErrorCode": 0,
[2026-03-12 05:40:49]     "exeErrorDiag": "",
[2026-03-12 05:40:49]     "pilotErrorCode": 0,
[2026-03-12 05:40:49]     "pilotErrorDiag": "",
[2026-03-12 05:40:49]  *** Listing of results directory ***
[2026-03-12 05:40:49] total 419824
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc    584627 Mar  3 08:05 pilot3.tar.gz
[2026-03-12 05:40:49] -rwx------. 1 boinc boinc     36322 Mar  3 08:05 runpilot2-wrapper.sh
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc      5111 Mar  3 08:05 queuedata.json
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc       100 Mar 11 21:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 05:40:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 21:51 run_atlas
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc       105 Mar 11 21:51 job.xml
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc 220748938 Mar 11 21:51 EVNT.48461070._000001.pool.root.1
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc     15845 Mar 11 21:51 start_atlas.sh
[2026-03-12 05:40:49] drwxrwx--x. 2 boinc boinc        68 Mar 11 21:51 shared
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc    597954 Mar 11 21:51 input.tar.gz
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc      6392 Mar 11 21:51 init_data.xml
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc         0 Mar 11 21:51 boinc_lockfile
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc      2621 Mar 11 21:52 pandaJob.out
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc       415 Mar 11 21:58 workernode_map.json
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc   1006235 Mar 11 21:58 agis_schedconf.cvmfs.json
[2026-03-12 05:40:49] drwx------. 5 boinc boinc      4096 Mar 11 21:58 pilot3
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc 196186639 Mar 12 05:38 HITS.48851808._000014.pool.root.1
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc       532 Mar 12 05:38 boinc_task_state.xml
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc      1020 Mar 12 05:39 memory_monitor_summary.json
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc   1511578 Mar 12 05:39 agis_ddmendpoints.agis.ALL.json
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc    651708 Mar 12 05:40 log.48851808._000014.job.log.tgz.1
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc      6315 Mar 12 05:40 heartbeat.json
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc        95 Mar 12 05:40 pilot_heartbeat.json
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc        29 Mar 12 05:40 wrapper_checkpoint.txt
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc      8192 Mar 12 05:40 boinc_mmap_file
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc      4881 Mar 12 05:40 pilotlog.txt
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc   3867355 Mar 12 05:40 log.48851808._000014.job.log.1
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc       357 Mar 12 05:40 output.list
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc       620 Mar 12 05:40 runtime_log
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc   4536320 Mar 12 05:40 result.tar.gz
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc       658 Mar 12 05:40 tiqLDmrzYH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6tFLDm8EASOm.diag
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc      8832 Mar 12 05:40 runtime_log.err
[2026-03-12 05:40:49] -rw-r--r--. 1 boinc boinc     20809 Mar 12 05:40 stderr.txt
[2026-03-12 05:40:49] HITS file was successfully produced:
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc 196186639 Mar 12 05:38 shared/HITS.pool.root.1
[2026-03-12 05:40:49]  *** Contents of shared directory: ***
[2026-03-12 05:40:49] total 412200
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc 220748938 Mar 11 21:51 ATLAS.root_0
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc     15845 Mar 11 21:51 start_atlas.sh
[2026-03-12 05:40:49] -rw-r--r--. 2 boinc boinc    597954 Mar 11 21:51 input.tar.gz
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc 196186639 Mar 12 05:38 HITS.pool.root.1
[2026-03-12 05:40:49] -rw-------. 1 boinc boinc   4536320 Mar 12 05:40 result.tar.gz
05:40:51 (19839): run_atlas exited; CPU time 121631.281152
05:40:51 (19839): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN