Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:39 (3435173): wrapper (7.7.26015): starting
07:48:39 (3435173): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 07:48:40] Arguments: --nthreads 4
[2026-03-12 07:48:40] Threads: 4
[2026-03-12 07:48:40] Checking for CVMFS
[2026-03-12 07:48:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 07:48:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 07:48:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 07:48:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 07:48:40] 2.9.2.0 3122 20318 101248 157186 0 50 31126697 36864000 0 130560 0 9508005 99.985 755857 8673 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 07:48:40] CVMFS is ok
[2026-03-12 07:48:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 07:48:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 07:48:40] Further information can be found at the LHC@home message board.
[2026-03-12 07:48:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 07:48:40] Checking for apptainer binary...
[2026-03-12 07:48:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 07:48:40] Running /usr/bin/apptainer --version
[2026-03-12 07:48:40] apptainer version 1.4.1-1.1
[2026-03-12 07:48:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 07:48:40] atlasA139
[2026-03-12 07:48:40] apptainer works
[2026-03-12 07:48:40] Set ATHENA_PROC_NUMBER=4
[2026-03-12 07:48:40] Set ATHENA_CORE_NUMBER=4
[2026-03-12 07:48:40] Starting ATLAS job with PandaID=7036220289
[2026-03-12 07:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 10:17:11]  *** The last 200 lines of the pilot log: ***
[2026-03-12 10:17:11] 2026-03-12 09:16:40,849 | INFO     | aborting job monitoring since job object (job id=7036220289) has expired
[2026-03-12 10:17:11] 2026-03-12 09:16:40,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:17:11] 2026-03-12 09:16:40,849 | INFO     | will abort loop
[2026-03-12 10:17:11] 2026-03-12 09:16:41,528 | INFO     | all data control threads have been joined
[2026-03-12 10:17:11] 2026-03-12 09:16:41,629 | INFO     | all payload control threads have been joined
[2026-03-12 10:17:11] 2026-03-12 09:16:41,674 | INFO     | all job control threads have been joined
[2026-03-12 10:17:11] 2026-03-12 09:16:41,812 | INFO     | [job] queue monitor thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:41,812 | INFO     | [job] retrieve thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:41,855 | INFO     | [job] job monitor thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:41,992 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,061 | INFO     | [payload] validate_post thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,308 | INFO     | [payload] failed_post thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,534 | INFO     | [data] control thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,635 | INFO     | [payload] control thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,680 | INFO     | [job] control thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,684 | INFO     | [job] validate thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,813 | INFO     | [data] copytool_out thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,897 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:42,926 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 10:17:11] 2026-03-12 09:16:43,005 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:43,127 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:43,173 | INFO     | [data] copytool_in thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:16:46,934 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 10:17:11] 2026-03-12 09:17:03,591 | INFO     | [monitor] cgroup control has ended
[2026-03-12 10:17:11] 2026-03-12 09:17:04,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161093654336)>', '<ExcThread(monitor, started 140160595379968)>']
[2026-03-12 10:17:11] 2026-03-12 09:17:09,121 | INFO     | all workflow threads have been joined
[2026-03-12 10:17:11] 2026-03-12 09:17:09,122 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 10:17:11] 2026-03-12 09:17:09,122 | INFO     | traces error code: 0
[2026-03-12 10:17:11] 2026-03-12 09:17:09,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 10:17:11] 2026-03-12 09:17:11,699 | INFO     | PID=3439286 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 10:17:11] 2026-03-12 09:17:11,700 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 10:17:11] 2026-03-12 09:17:11,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 10:17:11] 2026-03-12 09:17:11,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 10:17:11] 2026-03-12 09:17:11,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 10:17:11] 2026-03-12 09:17:11,700 | INFO     | [monitor] control thread has ended
[2026-03-12 10:17:11] 2026-03-12 09:17:11,767 [wrapper] ==== pilot stdout END ====
[2026-03-12 10:17:11] 2026-03-12 09:17:11,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 10:17:11] 2026-03-12 09:17:11,775 [wrapper] pilotpid: 3439286
[2026-03-12 10:17:11] 2026-03-12 09:17:11,779 [wrapper] Pilot exit status: 0
[2026-03-12 10:17:11] 2026-03-12 09:17:11,790 [wrapper] pandaids: 7036220289
[2026-03-12 10:17:11] 2026-03-12 09:17:11,812 [wrapper] cleanup supervisor_pilot 3449780 3439287
[2026-03-12 10:17:11] 2026-03-12 09:17:11,815 [wrapper] Test setup, not cleaning
[2026-03-12 10:17:11] 2026-03-12 09:17:11,819 [wrapper] apfmon messages muted
[2026-03-12 10:17:11] 2026-03-12 09:17:11,823 [wrapper] ==== wrapper stdout END ====
[2026-03-12 10:17:11] 2026-03-12 09:17:11,827 [wrapper] ==== wrapper stderr END ====
[2026-03-12 10:17:11]  *** Error codes and diagnostics ***
[2026-03-12 10:17:11]     "exeErrorCode": 0,
[2026-03-12 10:17:11]     "exeErrorDiag": "",
[2026-03-12 10:17:11]     "pilotErrorCode": 0,
[2026-03-12 10:17:11]     "pilotErrorDiag": "",
[2026-03-12 10:17:11]  *** Listing of results directory ***
[2026-03-12 10:17:11] total 424380
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc    584627 Mar  3 08:05 pilot3.tar.gz
[2026-03-12 10:17:11] -rwx------ 1 boinc boinc     36322 Mar  3 08:06 runpilot2-wrapper.sh
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      5111 Mar  3 08:06 queuedata.json
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc       100 Mar 12 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 10:17:11] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 07:48 run_atlas
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc       105 Mar 12 07:48 job.xml
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc 220634799 Mar 12 07:48 EVNT.48461070._000003.pool.root.1
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc    597967 Mar 12 07:48 input.tar.gz
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc     15845 Mar 12 07:48 start_atlas.sh
[2026-03-12 10:17:11] drwxrwx--x 2 boinc boinc      4096 Mar 12 07:48 shared
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc         0 Mar 12 07:48 boinc_setup_complete
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      6372 Mar 12 07:48 init_data.xml
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc         0 Mar 12 07:48 boinc_lockfile
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      2622 Mar 12 07:48 pandaJob.out
[2026-03-12 10:17:11] -rw------- 1 boinc boinc   1006243 Mar 12 07:48 agis_schedconf.cvmfs.json
[2026-03-12 10:17:11] -rw------- 1 boinc boinc   1511578 Mar 12 07:48 agis_ddmendpoints.agis.ALL.json
[2026-03-12 10:17:11] -rw------- 1 boinc boinc       423 Mar 12 07:48 workernode_map.json
[2026-03-12 10:17:11] drwx------ 5 boinc boinc      4096 Mar 12 07:48 pilot3
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc       530 Mar 12 10:16 boinc_task_state.xml
[2026-03-12 10:17:11] -rw------- 1 boinc boinc 206837102 Mar 12 10:16 HITS.48851808._000060.pool.root.1
[2026-03-12 10:17:11] -rw------- 1 boinc boinc      1018 Mar 12 10:16 memory_monitor_summary.json
[2026-03-12 10:17:11] -rw------- 1 boinc boinc    322204 Mar 12 10:16 log.48851808._000060.job.log.tgz.1
[2026-03-12 10:17:11] -rw------- 1 boinc boinc        95 Mar 12 10:16 pilot_heartbeat.json
[2026-03-12 10:17:11] -rw------- 1 boinc boinc      6301 Mar 12 10:16 heartbeat.json
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      8192 Mar 12 10:17 boinc_mmap_file
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc        27 Mar 12 10:17 wrapper_checkpoint.txt
[2026-03-12 10:17:11] -rw------- 1 boinc boinc       747 Mar 12 10:17 pilotlog.txt
[2026-03-12 10:17:11] -rw------- 1 boinc boinc   1265333 Mar 12 10:17 log.48851808._000060.job.log.1
[2026-03-12 10:17:11] -rw------- 1 boinc boinc       357 Mar 12 10:17 output.list
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc       620 Mar 12 10:17 runtime_log
[2026-03-12 10:17:11] -rw------- 1 boinc boinc   1607680 Mar 12 10:17 result.tar.gz
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      8911 Mar 12 10:17 runtime_log.err
[2026-03-12 10:17:11] -rw------- 1 boinc boinc       660 Mar 12 10:17 AYxNDmz0YH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmjoDLDmB4i9Go.diag
[2026-03-12 10:17:11] -rw-r--r-- 1 boinc boinc      7073 Mar 12 10:17 stderr.txt
[2026-03-12 10:17:11] HITS file was successfully produced:
[2026-03-12 10:17:11] -rw------- 1 boinc boinc 206837102 Mar 12 10:16 shared/HITS.pool.root.1
[2026-03-12 10:17:11]  *** Contents of shared directory: ***
[2026-03-12 10:17:11] total 419636
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc 220634799 Mar 12 07:48 ATLAS.root_0
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc    597967 Mar 12 07:48 input.tar.gz
[2026-03-12 10:17:11] -rw-r--r-- 2 boinc boinc     15845 Mar 12 07:48 start_atlas.sh
[2026-03-12 10:17:11] -rw------- 1 boinc boinc 206837102 Mar 12 10:16 HITS.pool.root.1
[2026-03-12 10:17:11] -rw------- 1 boinc boinc   1607680 Mar 12 10:17 result.tar.gz
10:17:13 (3435173): run_atlas exited; CPU time 34186.324147
10:17:13 (3435173): called boinc_finish(0)

</stderr_txt>
]]>

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