Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:43:35 (3056658): wrapper (7.7.26015): starting
08:43:35 (3056658): wrapper: running run_atlas (--nthreads 3)
[2026-03-12 08:43:35] Arguments: --nthreads 3
[2026-03-12 08:43:35] Threads: 3
[2026-03-12 08:43:35] Checking for CVMFS
[2026-03-12 08:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-12 08:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-12 08:43:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-12 08:43:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-12 08:43:36] 2.9.2.0 36660 21223 89876 157188 0 50 25433335 36864000 0 130560 0 8556583 99.983 791249 11818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-12 08:43:36] CVMFS is ok
[2026-03-12 08:43:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 08:43:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 08:43:36] Further information can be found at the LHC@home message board.
[2026-03-12 08:43:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 08:43:36] Checking for apptainer binary...
[2026-03-12 08:43:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-12 08:43:36] Running /usr/bin/apptainer --version
[2026-03-12 08:43:36] apptainer version 1.4.1-1.1
[2026-03-12 08:43:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 08:43:36] thA371a
[2026-03-12 08:43:36] apptainer works
[2026-03-12 08:43:36] Set ATHENA_PROC_NUMBER=3
[2026-03-12 08:43:36] Set ATHENA_CORE_NUMBER=3
[2026-03-12 08:43:36] Starting ATLAS job with PandaID=7036191282
[2026-03-12 08:43:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 10:55:04]  *** The last 200 lines of the pilot log: ***
[2026-03-12 10:55:04] 2026-03-12 09:54:24,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:55:04] 2026-03-12 09:54:24,733 | INFO     | will abort loop
[2026-03-12 10:55:04] 2026-03-12 09:54:24,778 | INFO     | all payload control threads have been joined
[2026-03-12 10:55:04] 2026-03-12 09:54:25,588 | INFO     | all job control threads have been joined
[2026-03-12 10:55:04] 2026-03-12 09:54:25,624 | INFO     | [job] retrieve thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:25,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 10:55:04] 2026-03-12 09:54:25,701 | INFO     | [data] control thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:25,739 | INFO     | [job] job monitor thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:25,784 | INFO     | [payload] control thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:25,801 | INFO     | [data] copytool_in thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:25,893 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:26,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:26,321 | INFO     | [payload] validate_post thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:26,594 | INFO     | [job] control thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:26,733 | INFO     | [payload] failed_post thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:27,015 | INFO     | [job] validate thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:27,103 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:27,120 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:27,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:55:04] 2026-03-12 09:54:27,678 | INFO     | [data] copytool_out thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:28,581 | INFO     | [job] queue monitor thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:28,625 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 10:55:04] 2026-03-12 09:54:54,544 | INFO     | 7842s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-12 10:55:04] 2026-03-12 09:54:55,601 | INFO     | PID=3060696 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 10:55:04] 2026-03-12 09:54:55,601 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 10:55:04] 2026-03-12 09:54:55,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 10:55:04] 2026-03-12 09:54:55,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 10:55:04] 2026-03-12 09:54:57,002 | INFO     | [monitor] cgroup control has ended
[2026-03-12 10:55:04] 2026-03-12 09:54:58,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564869494592)>', '<ExcThread(monitor, started 140564498454272)>']
[2026-03-12 10:55:04] 2026-03-12 09:54:59,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 10:55:04] 2026-03-12 09:54:59,623 | INFO     | [monitor] control thread has ended
[2026-03-12 10:55:04] 2026-03-12 09:55:03,961 | INFO     | all workflow threads have been joined
[2026-03-12 10:55:04] 2026-03-12 09:55:03,961 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 10:55:04] 2026-03-12 09:55:03,962 | INFO     | traces error code: 0
[2026-03-12 10:55:04] 2026-03-12 09:55:03,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 10:55:04] 2026-03-12 09:55:04,012 [wrapper] ==== pilot stdout END ====
[2026-03-12 10:55:04] 2026-03-12 09:55:04,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 10:55:04] 2026-03-12 09:55:04,017 [wrapper] pilotpid: 3060696
[2026-03-12 10:55:04] 2026-03-12 09:55:04,019 [wrapper] Pilot exit status: 0
[2026-03-12 10:55:04] 2026-03-12 09:55:04,027 [wrapper] pandaids: 7036191282
[2026-03-12 10:55:04] 2026-03-12 09:55:04,042 [wrapper] cleanup supervisor_pilot 3070638 3060697
[2026-03-12 10:55:04] 2026-03-12 09:55:04,044 [wrapper] Test setup, not cleaning
[2026-03-12 10:55:04] 2026-03-12 09:55:04,047 [wrapper] apfmon messages muted
[2026-03-12 10:55:04] 2026-03-12 09:55:04,049 [wrapper] ==== wrapper stdout END ====
[2026-03-12 10:55:04] 2026-03-12 09:55:04,051 [wrapper] ==== wrapper stderr END ====
[2026-03-12 10:55:04]  *** Error codes and diagnostics ***
[2026-03-12 10:55:04]     "exeErrorCode": 0,
[2026-03-12 10:55:04]     "exeErrorDiag": "",
[2026-03-12 10:55:04]     "pilotErrorCode": 0,
[2026-03-12 10:55:04]     "pilotErrorDiag": "",
[2026-03-12 10:55:04]  *** Listing of results directory ***
[2026-03-12 10:55:04] total 369920
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc    584627 Mar  3 05:44 pilot3.tar.gz
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      5111 Mar  3 05:45 queuedata.json
[2026-03-12 10:55:04] -rwx------ 1 boinc boinc     36322 Mar  3 05:45 runpilot2-wrapper.sh
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc       100 Mar 12 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 10:55:04] -rwxr-xr-x 1 boinc boinc      7986 Mar 12 08:43 run_atlas
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc       105 Mar 12 08:43 job.xml
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc 210213556 Mar 12 08:43 EVNT.48461276._000002.pool.root.1
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc    597984 Mar 12 08:43 input.tar.gz
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc     15845 Mar 12 08:43 start_atlas.sh
[2026-03-12 10:55:04] drwxrwx--x 2 boinc boinc      4096 Mar 12 08:43 shared
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc         0 Mar 12 08:43 boinc_setup_complete
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      6439 Mar 12 08:43 init_data.xml
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc         0 Mar 12 08:43 boinc_lockfile
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      2647 Mar 12 08:43 pandaJob.out
[2026-03-12 10:55:04] -rw------- 1 boinc boinc   1006243 Mar 12 08:43 agis_schedconf.cvmfs.json
[2026-03-12 10:55:04] -rw------- 1 boinc boinc   1511578 Mar 12 08:43 agis_ddmendpoints.agis.ALL.json
[2026-03-12 10:55:04] -rw------- 1 boinc boinc       428 Mar 12 08:43 workernode_map.json
[2026-03-12 10:55:04] drwx------ 5 boinc boinc      4096 Mar 12 08:43 pilot3
[2026-03-12 10:55:04] -rw------- 1 boinc boinc 161850609 Mar 12 10:54 HITS.48851883._000026.pool.root.1
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc       529 Mar 12 10:54 boinc_task_state.xml
[2026-03-12 10:55:04] -rw------- 1 boinc boinc      1022 Mar 12 10:54 memory_monitor_summary.json
[2026-03-12 10:55:04] -rw------- 1 boinc boinc    280286 Mar 12 10:54 log.48851883._000026.job.log.tgz.1
[2026-03-12 10:55:04] -rw------- 1 boinc boinc        95 Mar 12 10:54 pilot_heartbeat.json
[2026-03-12 10:55:04] -rw------- 1 boinc boinc      6297 Mar 12 10:54 heartbeat.json
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      8192 Mar 12 10:54 boinc_mmap_file
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc        27 Mar 12 10:54 wrapper_checkpoint.txt
[2026-03-12 10:55:04] -rw------- 1 boinc boinc      5049 Mar 12 10:55 pilotlog.txt
[2026-03-12 10:55:04] -rw------- 1 boinc boinc   1126061 Mar 12 10:55 log.48851883._000026.job.log.1
[2026-03-12 10:55:04] -rw------- 1 boinc boinc       357 Mar 12 10:55 output.list
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc       620 Mar 12 10:55 runtime_log
[2026-03-12 10:55:04] -rw------- 1 boinc boinc   1423360 Mar 12 10:55 result.tar.gz
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      8901 Mar 12 10:55 runtime_log.err
[2026-03-12 10:55:04] -rw------- 1 boinc boinc       658 Mar 12 10:55 HMwKDm2oWH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRaFLDmDnTYLn.diag
[2026-03-12 10:55:04] -rw-r--r-- 1 boinc boinc      7101 Mar 12 10:55 stderr.txt
[2026-03-12 10:55:04] HITS file was successfully produced:
[2026-03-12 10:55:04] -rw------- 1 boinc boinc 161850609 Mar 12 10:54 shared/HITS.pool.root.1
[2026-03-12 10:55:04]  *** Contents of shared directory: ***
[2026-03-12 10:55:04] total 365348
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc 210213556 Mar 12 08:43 ATLAS.root_0
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc    597984 Mar 12 08:43 input.tar.gz
[2026-03-12 10:55:04] -rw-r--r-- 2 boinc boinc     15845 Mar 12 08:43 start_atlas.sh
[2026-03-12 10:55:04] -rw------- 1 boinc boinc 161850609 Mar 12 10:54 HITS.pool.root.1
[2026-03-12 10:55:04] -rw------- 1 boinc boinc   1423360 Mar 12 10:55 result.tar.gz
10:55:05 (3056658): run_atlas exited; CPU time 22708.461809
10:55:05 (3056658): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN