Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:28:43 (1353012): wrapper (7.7.26015): starting
03:28:43 (1353012): wrapper: running run_atlas (--nthreads 11)
[2026-03-11 03:28:43] Arguments: --nthreads 11
[2026-03-11 03:28:43] Threads: 11
[2026-03-11 03:28:43] Checking for CVMFS
[2026-03-11 03:28:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 03:28:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 03:28:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 03:28:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 03:28:46] 2.13.3.0 14106 180901 285144 157147 3 777 22152382 40960000 70552 16776704 0 2056191760 99.742 1393545761 46265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 03:28:46] CVMFS is ok
[2026-03-11 03:28:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 03:28:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 03:28:46] Further information can be found at the LHC@home message board.
[2026-03-11 03:28:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 03:28:46] Checking for apptainer binary...
[2026-03-11 03:28:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 03:28:46] Running /usr/bin/apptainer --version
[2026-03-11 03:28:46] apptainer version 1.4.5-2.el9
[2026-03-11 03:28:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 03:28:47] c8-7-5.aglt2.org
[2026-03-11 03:28:47] apptainer works
[2026-03-11 03:28:47] Set ATHENA_PROC_NUMBER=11
[2026-03-11 03:28:47] Set ATHENA_CORE_NUMBER=11
[2026-03-11 03:28:47] Starting ATLAS job with PandaID=7036183796
[2026-03-11 03:28:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:20:14]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:20:14] 2026-03-11 09:19:26,479 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:20:14] 2026-03-11 09:19:26,479 | INFO     | sum of square deviations: 329070902.6666656
[2026-03-11 05:20:14] 2026-03-11 09:19:26,479 | INFO     | sum of deviations: 56901730842.0
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | mean x: 1773217630.6666667
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | mean y: 2428839.2352941176
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | intersect: -306615845602.03326
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | chi2: 9.935954752199908
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | sum of square deviations: 283007330.6804123
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | sum of deviations: 60568383275.96906
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | mean x: 1773217478.1546392
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | mean y: 2440066.402061856
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | intersect: -379496266169.5881
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | chi2: 9.338683729361824
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | current chi2=9.338683729361824 (change=6.011209166445161 %)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,480 | INFO     | right removable region: 96
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | sum of square deviations: 283009040.0206186
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | sum of deviations: 20923062803.494854
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | mean x: 1773217783.1752577
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | mean y: 2547890.206185567
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | intersect: -131092723974.41986
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | chi2: 4.017318848206057
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | current chi2=4.017318848206057 (change=59.56786289393491 %)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | sum of square deviations: 241458889.85869613
[2026-03-11 05:20:14] 2026-03-11 09:19:26,494 | INFO     | sum of deviations: -6770244134.152174
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | mean x: 1773217935.6847825
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | mean y: 2649294.8913043477
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | intersect: 49721747790.990685
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | chi2: 0.9788337213076699
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | current chi2=0.9788337213076699 (change=75.63465190857902 %)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | sum of square deviations: 204187889.67816097
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | sum of deviations: -12226100927.827583
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | mean x: 1773218088.1954024
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | mean y: 2671151.9310344825
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | intersect: 106177152642.96144
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | chi2: 0.7783020391891895
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | current chi2=0.7783020391891895 (change=20.486797476754344 %)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | left removable region: 30
[2026-03-11 05:20:14] 2026-03-11 09:19:26,495 | INFO     | sum of square deviations: 89133439.09090905
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | sum of deviations: -1388294477.0909088
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | mean x: 1773218362.7272727
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | mean y: 2673032.9393939395
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | intersect: 27621367933.06175
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | chi2: 0.006928007921363795
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | current memory leak: -15.58 B/s (using 66 data points, chi2=0.01)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | ..............................
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . Timing measurements:
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . get job = 1 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . initial setup = 82 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . payload setup = 117 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . stage-in = 0 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,496 | INFO     | . payload execution = 6271 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,576 | INFO     | . stage-out = 2 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,576 | INFO     | . log creation = 0 s
[2026-03-11 05:20:14] 2026-03-11 09:19:26,576 | INFO     | ..............................
[2026-03-11 05:20:14] 2026-03-11 09:19:27,234 | INFO     | 
[2026-03-11 05:20:14] 2026-03-11 09:19:27,234 | INFO     | job summary report
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | --------------------------------------------------
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | PanDA job id: 7036183796
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | task id: 48838551
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | errors: (none)
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | pilot state: finished 
[2026-03-11 05:20:14] 2026-03-11 09:19:27,239 | INFO     | transexitcode: 0
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | exeerrorcode: 0
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | exeerrordiag: 
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | exitcode: 0
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | exitmsg: OK
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | cpuconsumptiontime: 25644 s
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | nevents: 400
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | neventsw: 0
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | pid: 1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | pgrp: 1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | corecount: 11
[2026-03-11 05:20:14] 2026-03-11 09:19:27,240 | INFO     | event service: False
[2026-03-11 05:20:14] 2026-03-11 09:19:27,241 | INFO     | sizes: {0: 2279079, 1: 2279764, 2: 2280165, 3: 2280225, 13: 2280253, 6392: 2307356, 6396: 2316354, 6398: 2316410, 6400: 2316604}
[2026-03-11 05:20:14] 2026-03-11 09:19:27,241 | INFO     | --------------------------------------------------
[2026-03-11 05:20:14] 2026-03-11 09:19:27,241 | INFO     | 
[2026-03-11 05:20:14] 2026-03-11 09:19:27,242 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-03-11 05:20:14] 2026-03-11 09:19:27,376 | WARNING  | process 1474473 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 05:20:14] 2026-03-11 09:19:27,376 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-7036183796/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | job 7036183796 has completed (purged errors)
[2026-03-11 05:20:14] 2026-03-11 09:19:27,769 | INFO     | overall cleanup function is called
[2026-03-11 05:20:14] 2026-03-11 09:19:28,803 | INFO     | --- collectZombieJob: --- 10, [1474473]
[2026-03-11 05:20:14] 2026-03-11 09:19:28,803 | INFO     | zombie collector waiting for pid 1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:28,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:20:14] 2026-03-11 09:19:28,803 | INFO     | collected zombie processes
[2026-03-11 05:20:14] 2026-03-11 09:19:28,803 | INFO     | will attempt to kill all subprocesses of pid=1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:31,156 | INFO     | PID=1396644 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 05:20:14] 2026-03-11 09:19:31,171 | INFO     | .. there are 116 such processes running
[2026-03-11 05:20:14] 2026-03-11 09:19:32,020 | INFO     | number of running child processes to parent process 1474473: 1
[2026-03-11 05:20:14] 2026-03-11 09:19:32,020 | INFO     | maximum number of monitored processes: 7
[2026-03-11 05:20:14] 2026-03-11 09:19:32,020 | INFO     | aborting job monitoring since job object (job id=7036183796) has expired
[2026-03-11 05:20:14] 2026-03-11 09:19:32,533 | INFO     | process IDs to be killed: [1474473] (in reverse order)
[2026-03-11 05:20:14] 2026-03-11 09:19:33,233 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:20:14] 2026-03-11 09:19:33,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:20:14] 2026-03-11 09:19:33,307 | INFO     | did not find any defunct processes belonging to 1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:33,437 | INFO     | did not find any defunct processes belonging to 1474473
[2026-03-11 05:20:14] 2026-03-11 09:19:33,438 | INFO     | ready for new job
[2026-03-11 05:20:14] 2026-03-11 09:19:33,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:20:14] 2026-03-11 09:19:33,439 | INFO     | **************************************
[2026-03-11 05:20:14] 2026-03-11 09:19:33,439 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:20:14] 2026-03-11 09:19:33,439 | INFO     | **************************************
[2026-03-11 05:20:14] 2026-03-11 09:19:33,439 | INFO     | 
[2026-03-11 05:20:14] 2026-03-11 09:19:33,450 | INFO     | architecture information:
[2026-03-11 05:20:14] 2026-03-11 09:19:33,456 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:20:14] 2026-03-11 09:19:33,487 | INFO     | cat /etc/os-release:
[2026-03-11 05:20:14] NAME="CentOS Linux"
[2026-03-11 05:20:14] VERSION="7 (Core)"
[2026-03-11 05:20:14] ID="centos"
[2026-03-11 05:20:14] ID_LIKE="rhel fedora"
[2026-03-11 05:20:14] VERSION_ID="7"
[2026-03-11 05:20:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:20:14] ANSI_COLOR="0;31"
[2026-03-11 05:20:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:20:14] HOME_URL="https://www.centos.org/"
[2026-03-11 05:20:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:20:14] 
[2026-03-11 05:20:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:20:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:20:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:20:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:20:14] 
[2026-03-11 05:20:14] 2026-03-11 09:19:33,487 | INFO     | **************************************
[2026-03-11 05:20:14] 2026-03-11 09:19:33,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-03-11 05:20:14] 2026-03-11 09:19:34,042 | INFO     | sufficient remaining disk space (168116092928 B)
[2026-03-11 05:20:14] 2026-03-11 09:19:34,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:20:14] 2026-03-11 09:19:34,043 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:20:14] 2026-03-11 09:19:34,043 | INFO     | update_server=False
[2026-03-11 05:20:14] 2026-03-11 09:19:34,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:20:14] 2026-03-11 09:19:34,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:20:14] 2026-03-11 09:19:34,232 | INFO     | all payload control threads have been joined
[2026-03-11 05:20:14] 2026-03-11 09:19:34,534 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 05:20:14] 2026-03-11 09:19:34,534 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 05:20:14] 2026-03-11 09:19:34,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:20:14] 2026-03-11 09:19:34,534 | INFO     | will abort loop
[2026-03-11 05:20:14] 2026-03-11 09:19:34,983 | INFO     | all data control threads have been joined
[2026-03-11 05:20:14] 2026-03-11 09:19:35,049 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,081 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,238 | INFO     | [payload] control thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,330 | INFO     | all job control threads have been joined
[2026-03-11 05:20:14] 2026-03-11 09:19:35,383 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,383 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,383 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,485 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,547 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:20:14] 2026-03-11 09:19:35,989 | INFO     | [data] control thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:35,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:20:14] 2026-03-11 09:19:36,059 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:36,336 | INFO     | [job] control thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:36,367 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:36,377 | INFO     | [job] validate thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:36,943 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:40,008 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:44,438 | INFO     | job.realtimelogging is not enabled
[2026-03-11 05:20:14] 2026-03-11 09:19:44,612 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:20:14] 2026-03-11 09:19:45,476 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:20:14] 2026-03-11 09:19:45,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717756094272)>', '<ExcThread(monitor, started 140717280192256)>']
[2026-03-11 05:20:14] 2026-03-11 09:19:50,507 | INFO     | all workflow threads have been joined
[2026-03-11 05:20:14] 2026-03-11 09:19:50,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:20:14] 2026-03-11 09:19:50,507 | INFO     | traces error code: 0
[2026-03-11 05:20:14] 2026-03-11 09:19:50,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:20:14] 2026-03-11 09:20:10,479 | INFO     | PID=1396644 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 05:20:14] 2026-03-11 09:20:10,491 | INFO     | .. there are 116 such processes running
[2026-03-11 05:20:14] 2026-03-11 09:20:10,492 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:20:14] 2026-03-11 09:20:10,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:20:14] 2026-03-11 09:20:10,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:20:14] 2026-03-11 09:20:10,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:20:14] 2026-03-11 09:20:10,493 | INFO     | [monitor] control thread has ended
[2026-03-11 05:20:14] 2026-03-11 09:20:12,445 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:20:14] 2026-03-11 09:20:12,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:20:14] 2026-03-11 09:20:12,566 [wrapper] pilotpid: 1396644
[2026-03-11 05:20:14] 2026-03-11 09:20:12,626 [wrapper] Pilot exit status: 0
[2026-03-11 05:20:14] 2026-03-11 09:20:12,765 [wrapper] pandaids: 7036183796
[2026-03-11 05:20:14] 2026-03-11 09:20:14,083 [wrapper] cleanup supervisor_pilot 3165133 1396645
[2026-03-11 05:20:14] 2026-03-11 09:20:14,102 [wrapper] Test setup, not cleaning
[2026-03-11 05:20:14] 2026-03-11 09:20:14,139 [wrapper] apfmon messages muted
[2026-03-11 05:20:14] 2026-03-11 09:20:14,207 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:20:14] 2026-03-11 09:20:14,237 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:20:14]  *** Error codes and diagnostics ***
[2026-03-11 05:20:14]     "exeErrorCode": 0,
[2026-03-11 05:20:14]     "exeErrorDiag": "",
[2026-03-11 05:20:14]     "pilotErrorCode": 0,
[2026-03-11 05:20:14]     "pilotErrorDiag": "",
[2026-03-11 05:20:14]  *** Listing of results directory ***
[2026-03-11 05:20:14] total 466968
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 22:05 pilot3.tar.gz
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 22:05 queuedata.json
[2026-03-11 05:20:14] -rwx------. 1 boincer umatlas     36322 Mar  2 22:05 runpilot2-wrapper.sh
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas       100 Mar 11 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:20:14] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 03:28 run_atlas
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas       105 Mar 11 03:28 job.xml
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas 269322849 Mar 11 03:28 EVNT.48343723._000035.pool.root.1
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 03:28 start_atlas.sh
[2026-03-11 05:20:14] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 03:28 shared
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas    597954 Mar 11 03:28 input.tar.gz
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas         0 Mar 11 03:28 boinc_lockfile
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas      2549 Mar 11 03:28 pandaJob.out
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas        57 Mar 11 03:28 setup.sh.local
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas   1511578 Mar 11 03:31 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas       430 Mar 11 03:32 workernode_map.json
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas   1006644 Mar 11 03:32 agis_schedconf.cvmfs.json
[2026-03-11 05:20:14] drwx------. 5 boincer umatlas      4096 Mar 11 03:32 pilot3
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas      7172 Mar 11 05:11 init_data.xml
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas 202652414 Mar 11 05:18 HITS.48838551._001533.pool.root.1
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas       529 Mar 11 05:18 boinc_task_state.xml
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas      1046 Mar 11 05:19 memory_monitor_summary.json
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas    377238 Mar 11 05:19 log.48838551._001533.job.log.tgz.1
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas      6350 Mar 11 05:19 heartbeat.json
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas        95 Mar 11 05:20 pilot_heartbeat.json
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas       824 Mar 11 05:20 pilotlog.txt
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas        27 Mar 11 05:20 wrapper_checkpoint.txt
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas    756128 Mar 11 05:20 log.48838551._001533.job.log.1
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas       357 Mar 11 05:20 output.list
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas       620 Mar 11 05:20 runtime_log
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas   1146880 Mar 11 05:20 result.tar.gz
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas      9333 Mar 11 05:20 runtime_log.err
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas       654 Mar 11 05:20 JvzMDm6FVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSPFLDm3ywvSm.diag
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 05:20 boinc_mmap_file
[2026-03-11 05:20:14] -rw-r--r--. 1 boincer umatlas     21350 Mar 11 05:20 stderr.txt
[2026-03-11 05:20:14] HITS file was successfully produced:
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas 202652414 Mar 11 05:18 shared/HITS.pool.root.1
[2026-03-11 05:20:14]  *** Contents of shared directory: ***
[2026-03-11 05:20:14] total 462644
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas 269322849 Mar 11 03:28 ATLAS.root_0
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 03:28 start_atlas.sh
[2026-03-11 05:20:14] -rw-r--r--. 2 boincer umatlas    597954 Mar 11 03:28 input.tar.gz
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas 202652414 Mar 11 05:18 HITS.pool.root.1
[2026-03-11 05:20:14] -rw-------. 1 boincer umatlas   1146880 Mar 11 05:20 result.tar.gz
05:20:16 (1353012): run_atlas exited; CPU time 25921.074571
05:20:16 (1353012): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN