Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:20:07 (3722736): wrapper (7.7.26015): starting
12:20:07 (3722736): wrapper: running run_atlas (--nthreads 5)
[2026-03-11 12:20:07] Arguments: --nthreads 5
[2026-03-11 12:20:07] Threads: 5
[2026-03-11 12:20:07] Checking for CVMFS
[2026-03-11 12:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 12:20:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 12:20:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 12:20:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 12:20:07] 2.11.0.0 919232 20206 104364 157161 1 55 3483358 4096000 5560 130560 35 47121293 99.997 724428 397 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 12:20:07] CVMFS is ok
[2026-03-11 12:20:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 12:20:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 12:20:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 12:20:07] Further information can be found at the LHC@home message board.
[2026-03-11 12:20:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 12:20:07] Checking for apptainer binary...
[2026-03-11 12:20:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 12:20:07] Running /usr/bin/apptainer --version
[2026-03-11 12:20:07] apptainer version 1.4.5
[2026-03-11 12:20:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 12:20:07] x32-linux4
[2026-03-11 12:20:07] apptainer works
[2026-03-11 12:20:07] Set ATHENA_PROC_NUMBER=5
[2026-03-11 12:20:07] Set ATHENA_CORE_NUMBER=5
[2026-03-11 12:20:07] Starting ATLAS job with PandaID=7041050143
[2026-03-11 12:20:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 14:10:39]  *** The last 200 lines of the pilot log: ***
[2026-03-11 14:10:39] 2026-03-11 18:09:45,741 | INFO     | log transfer has been attempted: DONE
[2026-03-11 14:10:39] 2026-03-11 18:09:45,741 | INFO     | job 7041050143 has finished - writing final server update
[2026-03-11 14:10:39] 2026-03-11 18:09:45,741 | INFO     | total number of processed events: 400 (read)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,745 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-7041050143/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,746 | INFO     | extracted standard info from prmon json
[2026-03-11 14:10:39] 2026-03-11 18:09:45,746 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 14:10:39] 2026-03-11 18:09:45,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 14:10:39] 2026-03-11 18:09:45,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 14:10:39] 2026-03-11 18:09:45,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 14:10:39] 2026-03-11 18:09:45,747 | INFO     | fitting pss+swap vs Time
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | sum of square deviations: 390582207.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | sum of deviations: -3861219327.5000033
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | mean x: 1773249309.5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | mean y: 2373117.1018518517
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | intersect: 17532369065.73306
[2026-03-11 14:10:39] 2026-03-11 18:09:45,748 | INFO     | chi2: 2.02832419498156
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | sum of square deviations: 338804492.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | sum of deviations: 3591935712.000001
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | mean x: 1773249157.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | mean y: 2394324.359223301
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | intersect: -18797229422.371376
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | chi2: 1.2363710170613458
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | current chi2=1.2363710170613458 (change=39.044703991583255 %)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,749 | INFO     | sum of square deviations: 291817564.5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | sum of deviations: 4145888301.9999986
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | mean x: 1773249004.5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | mean y: 2396123.5918367347
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | intersect: -25190372231.137177
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | chi2: 1.2383225578402217
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | current chi2=1.2383225578402217 (change=-0.15784426777606247 %)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | right removable region: 97
[2026-03-11 14:10:39] 2026-03-11 18:09:45,750 | INFO     | sum of square deviations: 338804492.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | sum of deviations: -15354360386.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | mean x: 1773249462.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | mean y: 2405956.2621359224
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | intersect: 80364715006.84169
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | chi2: 0.8361682832139478
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | current chi2=0.8361682832139478 (change=58.775412466962685 %)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,751 | INFO     | sum of square deviations: 291817564.5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | sum of deviations: -13472493184.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | mean x: 1773249614.5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | mean y: 2399824.673469388
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | intersect: 81868936493.96252
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | chi2: 0.8367421855233886
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | current chi2=0.8367421855233886 (change=-0.06863478571980638 %)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | left removable region: 20
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | sum of square deviations: 141539398.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,752 | INFO     | sum of deviations: -3987012643.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | mean x: 1773249584.0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | mean y: 2423774.4285714286
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | intersect: 49952957763.57618
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | chi2: 0.007514016769104727
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | current memory leak: -28.17 B/s (using 77 data points, chi2=0.01)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | could have reported an average CPU frequency of 3866 MHz (7 samples)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | ..............................
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | . Timing measurements:
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | . get job = 0 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,753 | INFO     | . initial setup = 6 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | . payload setup = 6 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | . stage-in = 0 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | . payload execution = 6541 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | . stage-out = 0 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | . log creation = 0 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,754 | INFO     | ..............................
[2026-03-11 14:10:39] 2026-03-11 18:09:45,819 | INFO     | 
[2026-03-11 14:10:39] 2026-03-11 18:09:45,819 | INFO     | job summary report
[2026-03-11 14:10:39] 2026-03-11 18:09:45,819 | INFO     | --------------------------------------------------
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | PanDA job id: 7041050143
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | task id: 48955006
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | errors: (none)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | pilot state: finished 
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | transexitcode: 0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | exeerrorcode: 0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | exeerrordiag: 
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | exitcode: 0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | exitmsg: OK
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | cpuconsumptiontime: 26083 s
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | nevents: 400
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | neventsw: 0
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | pid: 3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | pgrp: 3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | corecount: 5
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | event service: False
[2026-03-11 14:10:39] 2026-03-11 18:09:45,820 | INFO     | sizes: {0: 2280263, 11: 2280263, 6551: 2307441, 6552: 2316647}
[2026-03-11 14:10:39] 2026-03-11 18:09:45,821 | INFO     | --------------------------------------------------
[2026-03-11 14:10:39] 2026-03-11 18:09:45,821 | INFO     | 
[2026-03-11 14:10:39] 2026-03-11 18:09:45,821 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | job 7041050143 has completed (purged errors)
[2026-03-11 14:10:39] 2026-03-11 18:09:45,839 | INFO     | overall cleanup function is called
[2026-03-11 14:10:39] 2026-03-11 18:09:46,850 | INFO     | --- collectZombieJob: --- 10, [3740801]
[2026-03-11 14:10:39] 2026-03-11 18:09:46,850 | INFO     | zombie collector waiting for pid 3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:46,850 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 14:10:39] 2026-03-11 18:09:46,850 | INFO     | collected zombie processes
[2026-03-11 14:10:39] 2026-03-11 18:09:46,850 | INFO     | will attempt to kill all subprocesses of pid=3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:47,004 | INFO     | process IDs to be killed: [3740801] (in reverse order)
[2026-03-11 14:10:39] 2026-03-11 18:09:47,060 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 14:10:39] 2026-03-11 18:09:47,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 14:10:39] 2026-03-11 18:09:47,065 | INFO     | did not find any defunct processes belonging to 3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:47,070 | INFO     | did not find any defunct processes belonging to 3740801
[2026-03-11 14:10:39] 2026-03-11 18:09:47,070 | INFO     | ready for new job
[2026-03-11 14:10:39] 2026-03-11 18:09:47,070 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 14:10:39] 2026-03-11 18:09:47,071 | INFO     | **************************************
[2026-03-11 14:10:39] 2026-03-11 18:09:47,071 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 14:10:39] 2026-03-11 18:09:47,071 | INFO     | **************************************
[2026-03-11 14:10:39] 2026-03-11 18:09:47,071 | INFO     | 
[2026-03-11 14:10:39] 2026-03-11 18:09:47,073 | INFO     | architecture information:
[2026-03-11 14:10:39] 2026-03-11 18:09:47,073 | INFO     | executing command: cat /etc/os-release
[2026-03-11 14:10:39] 2026-03-11 18:09:47,085 | INFO     | cat /etc/os-release:
[2026-03-11 14:10:39] NAME="CentOS Linux"
[2026-03-11 14:10:39] VERSION="7 (Core)"
[2026-03-11 14:10:39] ID="centos"
[2026-03-11 14:10:39] ID_LIKE="rhel fedora"
[2026-03-11 14:10:39] VERSION_ID="7"
[2026-03-11 14:10:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 14:10:39] ANSI_COLOR="0;31"
[2026-03-11 14:10:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 14:10:39] HOME_URL="https://www.centos.org/"
[2026-03-11 14:10:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 14:10:39] 
[2026-03-11 14:10:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 14:10:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 14:10:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 14:10:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 14:10:39] 
[2026-03-11 14:10:39] 2026-03-11 18:09:47,085 | INFO     | **************************************
[2026-03-11 14:10:39] 2026-03-11 18:09:47,588 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-03-11 14:10:39] 2026-03-11 18:09:47,602 | INFO     | sufficient remaining disk space (136238333952 B)
[2026-03-11 14:10:39] 2026-03-11 18:09:47,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | INFO     | update_server=False
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 14:10:39] 2026-03-11 18:09:47,603 | INFO     | aborting loop
[2026-03-11 14:10:39] 2026-03-11 18:09:48,370 | INFO     | all data control threads have been joined
[2026-03-11 14:10:39] 2026-03-11 18:09:48,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 14:10:39] 2026-03-11 18:09:48,604 | INFO     | [job] retrieve thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:48,608 | INFO     | [job] queue monitor thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:48,610 | INFO     | [job] job monitor thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:48,636 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:48,822 | INFO     | all job control threads have been joined
[2026-03-11 14:10:39] 2026-03-11 18:09:48,835 | INFO     | [data] copytool_in thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,002 | INFO     | [payload] validate_post thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,030 | INFO     | all payload control threads have been joined
[2026-03-11 14:10:39] 2026-03-11 18:09:49,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,375 | INFO     | [data] control thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,827 | INFO     | [job] control thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,835 | INFO     | [job] validate thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,919 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:49,954 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:50,035 | INFO     | [payload] control thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:50,081 | INFO     | [payload] failed_post thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:50,596 | INFO     | [data] copytool_out thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:09:51,610 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 14:10:39] 2026-03-11 18:10:18,571 | INFO     | PID=3729069 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 14:10:39] 2026-03-11 18:10:18,571 | INFO     | .. there are 8 such processes running
[2026-03-11 14:10:39] 2026-03-11 18:10:18,572 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 14:10:39] 2026-03-11 18:10:18,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 14:10:39] 2026-03-11 18:10:18,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 14:10:39] 2026-03-11 18:10:32,601 | INFO     | [monitor] cgroup control has ended
[2026-03-11 14:10:39] 2026-03-11 18:10:33,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127662936930112)>', '<ExcThread(monitor, started 127662458660608)>']
[2026-03-11 14:10:39] 2026-03-11 18:10:34,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 14:10:39] 2026-03-11 18:10:34,640 | INFO     | [monitor] control thread has ended
[2026-03-11 14:10:39] 2026-03-11 18:10:39,014 | INFO     | all workflow threads have been joined
[2026-03-11 14:10:39] 2026-03-11 18:10:39,014 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 14:10:39] 2026-03-11 18:10:39,014 | INFO     | traces error code: 0
[2026-03-11 14:10:39] 2026-03-11 18:10:39,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 14:10:39] 2026-03-11 18:10:39,092 [wrapper] ==== pilot stdout END ====
[2026-03-11 14:10:39] 2026-03-11 18:10:39,095 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 14:10:39] 2026-03-11 18:10:39,097 [wrapper] pilotpid: 3729069
[2026-03-11 14:10:39] 2026-03-11 18:10:39,099 [wrapper] Pilot exit status: 0
[2026-03-11 14:10:39] 2026-03-11 18:10:39,108 [wrapper] pandaids: 7041050143
[2026-03-11 14:10:39] 2026-03-11 18:10:39,145 [wrapper] cleanup supervisor_pilot 3814970 3729070
[2026-03-11 14:10:39] ./runpilot2-wrapper.sh: line 616: 3814970 Terminated              sleep 900
[2026-03-11 14:10:39] 2026-03-11 18:10:39,149 [wrapper] Test setup, not cleaning
[2026-03-11 14:10:39] 2026-03-11 18:10:39,151 [wrapper] apfmon messages muted
[2026-03-11 14:10:39] 2026-03-11 18:10:39,153 [wrapper] ==== wrapper stdout END ====
[2026-03-11 14:10:39] 2026-03-11 18:10:39,156 [wrapper] ==== wrapper stderr END ====
[2026-03-11 14:10:39]  *** Error codes and diagnostics ***
[2026-03-11 14:10:39]     "exeErrorCode": 0,
[2026-03-11 14:10:39]     "exeErrorDiag": "",
[2026-03-11 14:10:39]     "pilotErrorCode": 0,
[2026-03-11 14:10:39]     "pilotErrorDiag": "",
[2026-03-11 14:10:39]  *** Listing of results directory ***
[2026-03-11 14:10:39] total 613828
[2026-03-11 14:10:39] -rwx------ 1 boinc boinc     36322 Mar  9 14:27 runpilot2-wrapper.sh
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc      5111 Mar  9 14:27 queuedata.json
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc    584627 Mar  9 14:27 pilot3.tar.gz
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc       100 Mar 11 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 14:10:39] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 12:20 run_atlas
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc       105 Mar 11 12:20 job.xml
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc 435072640 Mar 11 12:20 EVNT.46701403._000704.pool.root.1
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 12:20 start_atlas.sh
[2026-03-11 14:10:39] drwxrwx--x 2 boinc boinc      4096 Mar 11 12:20 shared
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc    597937 Mar 11 12:20 input.tar.gz
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 12:20 boinc_setup_complete
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc      9742 Mar 11 12:20 init_data.xml
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc         0 Mar 11 12:20 boinc_lockfile
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc      2563 Mar 11 12:20 pandaJob.out
[2026-03-11 14:10:39] -rw------- 1 boinc boinc   1006251 Mar 11 12:20 agis_schedconf.cvmfs.json
[2026-03-11 14:10:39] -rw------- 1 boinc boinc   1511578 Mar 11 12:20 agis_ddmendpoints.agis.ALL.json
[2026-03-11 14:10:39] -rw------- 1 boinc boinc       424 Mar 11 12:20 workernode_map.json
[2026-03-11 14:10:39] drwx------ 5 boinc boinc      4096 Mar 11 12:20 pilot3
[2026-03-11 14:10:39] -rw------- 1 boinc boinc 187044677 Mar 11 14:09 HITS.48955006._035174.pool.root.1
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc       530 Mar 11 14:09 boinc_task_state.xml
[2026-03-11 14:10:39] -rw------- 1 boinc boinc      1036 Mar 11 14:09 memory_monitor_summary.json
[2026-03-11 14:10:39] -rw------- 1 boinc boinc    294598 Mar 11 14:09 log.48955006._035174.job.log.tgz.1
[2026-03-11 14:10:39] -rw------- 1 boinc boinc      6295 Mar 11 14:09 heartbeat.json
[2026-03-11 14:10:39] -rw------- 1 boinc boinc        95 Mar 11 14:10 pilot_heartbeat.json
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc        27 Mar 11 14:10 wrapper_checkpoint.txt
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc      8192 Mar 11 14:10 boinc_mmap_file
[2026-03-11 14:10:39] -rw------- 1 boinc boinc      4827 Mar 11 14:10 pilotlog.txt
[2026-03-11 14:10:39] -rw------- 1 boinc boinc    957206 Mar 11 14:10 log.48955006._035174.job.log.1
[2026-03-11 14:10:39] -rw------- 1 boinc boinc       357 Mar 11 14:10 output.list
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc       620 Mar 11 14:10 runtime_log
[2026-03-11 14:10:39] -rw------- 1 boinc boinc   1269760 Mar 11 14:10 result.tar.gz
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc      8891 Mar 11 14:10 runtime_log.err
[2026-03-11 14:10:39] -rw------- 1 boinc boinc       643 Mar 11 14:10 lb7LDm1UuJ9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwNdLDm4Hdy9m.diag
[2026-03-11 14:10:39] -rw-r--r-- 1 boinc boinc     21056 Mar 11 14:10 stderr.txt
[2026-03-11 14:10:39] HITS file was successfully produced:
[2026-03-11 14:10:39] -rw------- 1 boinc boinc 187044677 Mar 11 14:09 shared/HITS.pool.root.1
[2026-03-11 14:10:39]  *** Contents of shared directory: ***
[2026-03-11 14:10:39] total 609388
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc 435072640 Mar 11 12:20 ATLAS.root_0
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc     15845 Mar 11 12:20 start_atlas.sh
[2026-03-11 14:10:39] -rw-r--r-- 2 boinc boinc    597937 Mar 11 12:20 input.tar.gz
[2026-03-11 14:10:39] -rw------- 1 boinc boinc 187044677 Mar 11 14:09 HITS.pool.root.1
[2026-03-11 14:10:39] -rw------- 1 boinc boinc   1269760 Mar 11 14:10 result.tar.gz
14:10:40 (3722736): run_atlas exited; CPU time 26179.033126
14:10:40 (3722736): called boinc_finish(0)

</stderr_txt>
]]>

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