Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:01 (552576): wrapper (7.7.26015): starting
06:18:01 (552576): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 06:18:01] Arguments: --nthreads 8
[2026-03-11 06:18:01] Threads: 8
[2026-03-11 06:18:01] Checking for CVMFS
[2026-03-11 06:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 06:18:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 06:18:01] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 06:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 06:18:02] 2.13.3.0 6948 109903 225920 157150 1 99 34441134 40960000 13385 16776704 0 145864482 99.724 100033357 40960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 06:18:02] CVMFS is ok
[2026-03-11 06:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 06:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 06:18:02] Further information can be found at the LHC@home message board.
[2026-03-11 06:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 06:18:02] Checking for apptainer binary...
[2026-03-11 06:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 06:18:02] Running /usr/bin/apptainer --version
[2026-03-11 06:18:02] apptainer version 1.4.5-2.el9
[2026-03-11 06:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 06:18:03] c-206-41.aglt2.org
[2026-03-11 06:18:03] apptainer works
[2026-03-11 06:18:03] Set ATHENA_PROC_NUMBER=8
[2026-03-11 06:18:03] Set ATHENA_CORE_NUMBER=8
[2026-03-11 06:18:03] Starting ATLAS job with PandaID=7036262518
[2026-03-11 06:18:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 08:21:12]  *** The last 200 lines of the pilot log: ***
[2026-03-11 08:21:12] 2026-03-11 12:20:30,162 | INFO     | fitting pss+swap vs Time
[2026-03-11 08:21:12] 2026-03-11 12:20:30,162 | INFO     | sum of square deviations: 496483693.0769216
[2026-03-11 08:21:12] 2026-03-11 12:20:30,163 | INFO     | sum of deviations: 24325216358.69229
[2026-03-11 08:21:12] 2026-03-11 12:20:30,163 | INFO     | mean x: 1773228040.4615386
[2026-03-11 08:21:12] 2026-03-11 12:20:30,163 | INFO     | mean y: 2546764.5982905985
[2026-03-11 08:21:12] 2026-03-11 12:20:30,175 | INFO     | intersect: -86876753278.88571
[2026-03-11 08:21:12] 2026-03-11 12:20:30,176 | INFO     | chi2: 5.667360460980335
[2026-03-11 08:21:12] 2026-03-11 12:20:30,176 | INFO     | sum of square deviations: 435512971.9642866
[2026-03-11 08:21:12] 2026-03-11 12:20:30,176 | INFO     | sum of deviations: 24375214088.76786
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | mean x: 1773227887.982143
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | mean y: 2546888.3839285714
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | intersect: -99243198198.82051
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | chi2: 5.689855787725008
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | current chi2=5.689855787725008 (change=-0.3969277567494273 %)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | right removable region: 111
[2026-03-11 08:21:12] 2026-03-11 12:20:30,177 | INFO     | sum of square deviations: 435480031.9642866
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | sum of deviations: -15020301005.142853
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | mean x: 1773228192.982143
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | mean y: 2644891.4285714286
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | intersect: 61163706833.25739
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | chi2: 1.036023622794092
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | current chi2=1.036023622794092 (change=81.71946834991185 %)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,178 | INFO     | sum of square deviations: 379712976.6355139
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | sum of deviations: -28482936365.869156
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | mean x: 1773228345.4672897
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | mean y: 2681112.037383178
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | intersect: 133015649416.73044
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | chi2: 0.20401076046005023
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | current chi2=0.20401076046005023 (change=80.30829066331077 %)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,179 | INFO     | sum of square deviations: 328903055.960785
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | sum of deviations: -27419869270.372555
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | mean x: 1773228497.9803922
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | mean y: 2677749.81372549
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | intersect: 147832540440.17007
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | chi2: 0.17182138611859196
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | current chi2=0.17182138611859196 (change=15.778272807213838 %)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,180 | INFO     | left removable region: 30
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | sum of square deviations: 164693327.55555555
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | sum of deviations: -14499929899.814816
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | mean x: 1773228772.4074075
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | mean y: 2641782.358024691
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | intersect: 156121248879.95786
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | chi2: 0.1550650401292881
[2026-03-11 08:21:12] 2026-03-11 12:20:30,181 | INFO     | current memory leak: -88.04 B/s (using 81 data points, chi2=0.16)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | could have reported an average CPU frequency of 3228 MHz (8 samples)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | ..............................
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . Timing measurements:
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . get job = 1 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . initial setup = 48 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . payload setup = 67 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . stage-in = 0 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,182 | INFO     | . payload execution = 7155 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,183 | INFO     | . stage-out = 0 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,183 | INFO     | . log creation = 0 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,183 | INFO     | ..............................
[2026-03-11 08:21:12] 2026-03-11 12:20:30,292 | INFO     | 
[2026-03-11 08:21:12] 2026-03-11 12:20:30,292 | INFO     | job summary report
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | --------------------------------------------------
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | PanDA job id: 7036262518
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | task id: 48878057
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | errors: (none)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | pilot state: finished 
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | transexitcode: 0
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | exeerrorcode: 0
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | exeerrordiag: 
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | exitcode: 0
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | exitmsg: OK
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | cpuconsumptiontime: 37930 s
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | nevents: 400
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | neventsw: 0
[2026-03-11 08:21:12] 2026-03-11 12:20:30,293 | INFO     | pid: 563982
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | pgrp: 563982
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | corecount: 8
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | event service: False
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | sizes: {0: 2279177, 1: 2279778, 2: 2279890, 3: 2268401, 4: 2280379, 7227: 2307855, 7229: 2316853, 7231: 2316909, 7232: 2317103}
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | --------------------------------------------------
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | 
[2026-03-11 08:21:12] 2026-03-11 12:20:30,294 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-11 08:21:12] 2026-03-11 12:20:30,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,398 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,398 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,398 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,405 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 08:21:12] 2026-03-11 12:20:30,406 | INFO     | job 7036262518 has completed (purged errors)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,406 | INFO     | overall cleanup function is called
[2026-03-11 08:21:12] 2026-03-11 12:20:30,559 | WARNING  | process 563982 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 08:21:12] 2026-03-11 12:20:30,776 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,777 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-7036262518/payload.stdout) since it has not been created yet
[2026-03-11 08:21:12] 2026-03-11 12:20:30,777 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-11 08:21:12] 2026-03-11 12:20:30,844 | INFO     | sufficient remaining disk space (84595965952 B)
[2026-03-11 08:21:12] 2026-03-11 12:20:30,844 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-11 08:21:12] 2026-03-11 12:20:30,844 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-7036262518/HITS.48878057._000555.pool.root.1 since it does not exist
[2026-03-11 08:21:12] 2026-03-11 12:20:31,233 | INFO     | number of running child processes to parent process 563982: 1
[2026-03-11 08:21:12] 2026-03-11 12:20:31,233 | INFO     | maximum number of monitored processes: 6
[2026-03-11 08:21:12] 2026-03-11 12:20:31,233 | INFO     | aborting job monitoring since job object (job id=7036262518) has expired
[2026-03-11 08:21:12] 2026-03-11 12:20:31,416 | INFO     | --- collectZombieJob: --- 10, [563982]
[2026-03-11 08:21:12] 2026-03-11 12:20:31,417 | INFO     | zombie collector waiting for pid 563982
[2026-03-11 08:21:12] 2026-03-11 12:20:31,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 08:21:12] 2026-03-11 12:20:31,417 | INFO     | collected zombie processes
[2026-03-11 08:21:12] 2026-03-11 12:20:31,417 | INFO     | will attempt to kill all subprocesses of pid=563982
[2026-03-11 08:21:12] 2026-03-11 12:20:31,659 | INFO     | process IDs to be killed: [563982] (in reverse order)
[2026-03-11 08:21:12] 2026-03-11 12:20:31,736 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 08:21:12] 2026-03-11 12:20:31,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 08:21:12] 2026-03-11 12:20:31,745 | INFO     | did not find any defunct processes belonging to 563982
[2026-03-11 08:21:12] 2026-03-11 12:20:31,754 | INFO     | did not find any defunct processes belonging to 563982
[2026-03-11 08:21:12] 2026-03-11 12:20:31,754 | INFO     | ready for new job
[2026-03-11 08:21:12] 2026-03-11 12:20:31,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 08:21:12] 2026-03-11 12:20:31,756 | INFO     | **************************************
[2026-03-11 08:21:12] 2026-03-11 12:20:31,756 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 08:21:12] 2026-03-11 12:20:31,756 | INFO     | **************************************
[2026-03-11 08:21:12] 2026-03-11 12:20:31,756 | INFO     | 
[2026-03-11 08:21:12] 2026-03-11 12:20:31,759 | INFO     | architecture information:
[2026-03-11 08:21:12] 2026-03-11 12:20:31,759 | INFO     | executing command: cat /etc/os-release
[2026-03-11 08:21:12] 2026-03-11 12:20:31,775 | INFO     | cat /etc/os-release:
[2026-03-11 08:21:12] NAME="CentOS Linux"
[2026-03-11 08:21:12] VERSION="7 (Core)"
[2026-03-11 08:21:12] ID="centos"
[2026-03-11 08:21:12] ID_LIKE="rhel fedora"
[2026-03-11 08:21:12] VERSION_ID="7"
[2026-03-11 08:21:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 08:21:12] ANSI_COLOR="0;31"
[2026-03-11 08:21:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 08:21:12] HOME_URL="https://www.centos.org/"
[2026-03-11 08:21:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 08:21:12] 
[2026-03-11 08:21:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 08:21:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 08:21:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 08:21:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 08:21:12] 
[2026-03-11 08:21:12] 2026-03-11 12:20:31,776 | INFO     | **************************************
[2026-03-11 08:21:12] 2026-03-11 12:20:32,278 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-11 08:21:12] 2026-03-11 12:20:32,295 | INFO     | sufficient remaining disk space (84597014528 B)
[2026-03-11 08:21:12] 2026-03-11 12:20:32,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | INFO     | update_server=False
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | INFO     | aborting loop
[2026-03-11 08:21:12] 2026-03-11 12:20:32,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 08:21:12] 2026-03-11 12:20:32,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 08:21:12] 2026-03-11 12:20:33,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 08:21:12] 2026-03-11 12:20:33,106 | INFO     | all data control threads have been joined
[2026-03-11 08:21:12] 2026-03-11 12:20:33,132 | INFO     | all payload control threads have been joined
[2026-03-11 08:21:12] 2026-03-11 12:20:33,301 | INFO     | [job] retrieve thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,302 | INFO     | [job] job monitor thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,302 | INFO     | [job] queue monitor thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,305 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,316 | INFO     | [payload] validate_post thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,578 | INFO     | all job control threads have been joined
[2026-03-11 08:21:12] 2026-03-11 12:20:33,670 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:33,928 | INFO     | [payload] failed_post thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,038 | INFO     | [data] copytool_in thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,043 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,130 | INFO     | [data] control thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,138 | INFO     | [payload] control thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,584 | INFO     | [job] control thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:34,656 | INFO     | [job] validate thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:35,046 | INFO     | [data] copytool_out thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:20:36,300 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 08:21:12] 2026-03-11 12:21:03,658 | INFO     | PID=556839 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 08:21:12] 2026-03-11 12:21:03,659 | INFO     | .. there are 12 such processes running
[2026-03-11 08:21:12] 2026-03-11 12:21:03,659 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 08:21:12] 2026-03-11 12:21:03,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 08:21:12] 2026-03-11 12:21:03,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 08:21:12] 2026-03-11 12:21:05,149 | INFO     | [monitor] cgroup control has ended
[2026-03-11 08:21:12] 2026-03-11 12:21:06,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592599545664)>', '<ExcThread(monitor, started 140592247985920)>']
[2026-03-11 08:21:12] 2026-03-11 12:21:06,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 08:21:12] 2026-03-11 12:21:06,687 | INFO     | [monitor] control thread has ended
[2026-03-11 08:21:12] 2026-03-11 12:21:11,582 | INFO     | all workflow threads have been joined
[2026-03-11 08:21:12] 2026-03-11 12:21:11,582 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 08:21:12] 2026-03-11 12:21:11,583 | INFO     | traces error code: 0
[2026-03-11 08:21:12] 2026-03-11 12:21:11,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 08:21:12] 2026-03-11 12:21:11,728 [wrapper] ==== pilot stdout END ====
[2026-03-11 08:21:12] 2026-03-11 12:21:11,751 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 08:21:12] 2026-03-11 12:21:11,777 [wrapper] pilotpid: 556839
[2026-03-11 08:21:12] 2026-03-11 12:21:11,799 [wrapper] Pilot exit status: 0
[2026-03-11 08:21:12] 2026-03-11 12:21:11,999 [wrapper] pandaids: 7036262518
[2026-03-11 08:21:12] 2026-03-11 12:21:12,582 [wrapper] cleanup supervisor_pilot  776780 556840
[2026-03-11 08:21:12] 2026-03-11 12:21:12,628 [wrapper] Test setup, not cleaning
[2026-03-11 08:21:12] 2026-03-11 12:21:12,667 [wrapper] apfmon messages muted
[2026-03-11 08:21:12] 2026-03-11 12:21:12,685 [wrapper] ==== wrapper stdout END ====
[2026-03-11 08:21:12] 2026-03-11 12:21:12,688 [wrapper] ==== wrapper stderr END ====
[2026-03-11 08:21:12]  *** Error codes and diagnostics ***
[2026-03-11 08:21:12]     "exeErrorCode": 0,
[2026-03-11 08:21:12]     "exeErrorDiag": "",
[2026-03-11 08:21:12]     "pilotErrorCode": 0,
[2026-03-11 08:21:12]     "pilotErrorDiag": "",
[2026-03-11 08:21:12]  *** Listing of results directory ***
[2026-03-11 08:21:12] total 505404
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 03:25 pilot3.tar.gz
[2026-03-11 08:21:12] -rwx------. 1 boincer umatlas     36322 Mar  3 04:02 runpilot2-wrapper.sh
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 04:03 queuedata.json
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas       100 Mar 11 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 08:21:12] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 06:18 run_atlas
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas       105 Mar 11 06:18 job.xml
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas 294449814 Mar 11 06:18 EVNT.48717157._000023.pool.root.1
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas    597952 Mar 11 06:18 input.tar.gz
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 06:18 start_atlas.sh
[2026-03-11 08:21:12] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 06:18 shared
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas         0 Mar 11 06:18 boinc_lockfile
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas      2593 Mar 11 06:18 pandaJob.out
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas        57 Mar 11 06:18 setup.sh.local
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas   1006978 Mar 11 06:19 agis_schedconf.cvmfs.json
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas   1511578 Mar 11 06:19 agis_ddmendpoints.agis.ALL.json
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas       430 Mar 11 06:19 workernode_map.json
[2026-03-11 08:21:12] drwx------. 5 boincer umatlas      4096 Mar 11 06:19 pilot3
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas       529 Mar 11 08:19 boinc_task_state.xml
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas 216384176 Mar 11 08:19 HITS.48878057._000555.pool.root.1
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas        95 Mar 11 08:20 pilot_heartbeat.json
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas      1033 Mar 11 08:20 memory_monitor_summary.json
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas    353637 Mar 11 08:20 log.48878057._000555.job.log.tgz.1
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas      6332 Mar 11 08:20 heartbeat.json
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas      6907 Mar 11 08:20 init_data.xml
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas        27 Mar 11 08:21 wrapper_checkpoint.txt
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 08:21 boinc_mmap_file
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas      4819 Mar 11 08:21 pilotlog.txt
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas   1024239 Mar 11 08:21 log.48878057._000555.job.log.1
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas       357 Mar 11 08:21 output.list
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas       620 Mar 11 08:21 runtime_log
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas   1392640 Mar 11 08:21 result.tar.gz
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas      9341 Mar 11 08:21 runtime_log.err
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas       653 Mar 11 08:21 INtMDmPpaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4AELDmPNJDen.diag
[2026-03-11 08:21:12] -rw-r--r--. 1 boincer umatlas     21163 Mar 11 08:21 stderr.txt
[2026-03-11 08:21:12] HITS file was successfully produced:
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas 216384176 Mar 11 08:19 shared/HITS.pool.root.1
[2026-03-11 08:21:12]  *** Contents of shared directory: ***
[2026-03-11 08:21:12] total 500836
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas 294449814 Mar 11 06:18 ATLAS.root_0
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas    597952 Mar 11 06:18 input.tar.gz
[2026-03-11 08:21:12] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 06:18 start_atlas.sh
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas 216384176 Mar 11 08:19 HITS.pool.root.1
[2026-03-11 08:21:12] -rw-------. 1 boincer umatlas   1392640 Mar 11 08:21 result.tar.gz
08:21:14 (552576): run_atlas exited; CPU time 38031.714655
08:21:14 (552576): called boinc_finish(0)

</stderr_txt>
]]>

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