Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:08:49 (1076771): wrapper (7.7.26015): starting
03:08:49 (1076771): wrapper: running run_atlas (--nthreads 11)
[2026-03-11 03:08:49] Arguments: --nthreads 11
[2026-03-11 03:08:49] Threads: 11
[2026-03-11 03:08:49] Checking for CVMFS
[2026-03-11 03:08:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 03:08:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 03:09:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 03:09:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 03:09:12] 2.13.3.0 14106 180882 280300 157146 2 509 20576262 40960001 67539 16776704 0 2055049966 99.742 1393179807 46286 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 03:09:12] CVMFS is ok
[2026-03-11 03:09:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 03:09:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 03:09:12] Further information can be found at the LHC@home message board.
[2026-03-11 03:09:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 03:09:12] Checking for apptainer binary...
[2026-03-11 03:09:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 03:09:12] Running /usr/bin/apptainer --version
[2026-03-11 03:09:12] apptainer version 1.4.5-2.el9
[2026-03-11 03:09:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 03:09:13] c8-7-5.aglt2.org
[2026-03-11 03:09:13] apptainer works
[2026-03-11 03:09:14] Set ATHENA_PROC_NUMBER=11
[2026-03-11 03:09:14] Set ATHENA_CORE_NUMBER=11
[2026-03-11 03:09:14] Starting ATLAS job with PandaID=7036184070
[2026-03-11 03:09:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:01:40]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:01:40] 2026-03-11 09:00:37,721 | INFO     | total number of processed events: 400 (read)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7036184070/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | INFO     | extracted standard info from prmon json
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 05:01:40] 2026-03-11 09:00:37,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | sum of square deviations: 338810721.3786412
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | sum of deviations: 46367367800.640785
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | mean x: 1773216500.0776699
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | mean y: 2448730.669902913
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | intersect: -242668094027.57193
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | chi2: 10.625320807860001
[2026-03-11 05:01:40] 2026-03-11 09:00:37,834 | INFO     | sum of square deviations: 291819950.0000002
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | sum of deviations: 58659605002.142815
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | mean x: 1773216347.5714285
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | mean y: 2487210.2653061226
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | intersect: -356437058927.28394
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | chi2: 9.110605511221358
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | current chi2=9.110605511221358 (change=14.255713535897607 %)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | right removable region: 97
[2026-03-11 05:01:40] 2026-03-11 09:00:37,847 | INFO     | sum of square deviations: 291821353.84693915
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | sum of deviations: 10616116136.510204
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | mean x: 1773216652.5816326
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | mean y: 2564599.06122449
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | intersect: -64504962594.696014
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | chi2: 5.057147059958723
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | current chi2=5.057147059958723 (change=52.404758864148974 %)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | sum of square deviations: 249390211.3118274
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | sum of deviations: -16292718885.623655
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | mean x: 1773216805.0860214
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | mean y: 2661062.8279569894
[2026-03-11 05:01:40] 2026-03-11 09:00:37,848 | INFO     | intersect: 115847315817.16684
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | chi2: 2.2384766053864915
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | current chi2=2.2384766053864915 (change=55.73637509752856 %)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | sum of square deviations: 211290403.44318137
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | sum of deviations: -24070272964.818188
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | mean x: 1773216957.5795455
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | mean y: 2691596.5454545454
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | intersect: 202008156583.32495
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | chi2: 1.8358403344325307
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | current chi2=1.8358403344325307 (change=17.987066292544178 %)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | left removable region: 30
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | sum of square deviations: 93241310.62686554
[2026-03-11 05:01:40] 2026-03-11 09:00:37,849 | INFO     | sum of deviations: -5166509057.597014
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | mean x: 1773217232.074627
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | mean y: 2722596.119402985
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | intersect: 98256842245.53816
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | chi2: 0.013277615325077177
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | current memory leak: -55.41 B/s (using 67 data points, chi2=0.01)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | ..............................
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . Timing measurements:
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . get job = 1 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . initial setup = 85 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . payload setup = 105 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . stage-in = 0 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . payload execution = 6305 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,850 | INFO     | . stage-out = 5 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,866 | INFO     | . log creation = 2 s
[2026-03-11 05:01:40] 2026-03-11 09:00:37,866 | INFO     | ..............................
[2026-03-11 05:01:40] 2026-03-11 09:00:38,490 | INFO     | 
[2026-03-11 05:01:40] 2026-03-11 09:00:38,491 | INFO     | job summary report
[2026-03-11 05:01:40] 2026-03-11 09:00:38,495 | INFO     | --------------------------------------------------
[2026-03-11 05:01:40] 2026-03-11 09:00:38,495 | INFO     | PanDA job id: 7036184070
[2026-03-11 05:01:40] 2026-03-11 09:00:38,495 | INFO     | task id: 48838586
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | errors: (none)
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | pilot state: finished 
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | transexitcode: 0
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | exeerrorcode: 0
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | exeerrordiag: 
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | exitcode: 0
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | exitmsg: OK
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | cpuconsumptiontime: 25745 s
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | nevents: 400
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | neventsw: 0
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | pid: 1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | pgrp: 1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | corecount: 11
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | event service: False
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | sizes: {0: 2279750, 1: 2271274, 2: 2280211, 12: 2280239, 6416: 2307110, 6422: 2316108, 6423: 2316292, 6424: 2316486}
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | --------------------------------------------------
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | 
[2026-03-11 05:01:40] 2026-03-11 09:00:38,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | job 7036184070 has completed (purged errors)
[2026-03-11 05:01:40] 2026-03-11 09:00:38,891 | INFO     | overall cleanup function is called
[2026-03-11 05:01:40] 2026-03-11 09:00:39,847 | INFO     | PID=1126570 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-11 05:01:40] 2026-03-11 09:00:39,847 | INFO     | .. there are 115 such processes running
[2026-03-11 05:01:40] 2026-03-11 09:00:40,026 | INFO     | --- collectZombieJob: --- 10, [1180780]
[2026-03-11 05:01:40] 2026-03-11 09:00:40,026 | INFO     | zombie collector waiting for pid 1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:40,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:01:40] 2026-03-11 09:00:40,026 | INFO     | collected zombie processes
[2026-03-11 05:01:40] 2026-03-11 09:00:40,026 | INFO     | will attempt to kill all subprocesses of pid=1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:42,869 | INFO     | process IDs to be killed: [1180780] (in reverse order)
[2026-03-11 05:01:40] 2026-03-11 09:00:43,728 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:01:40] 2026-03-11 09:00:43,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:01:40] 2026-03-11 09:00:43,863 | INFO     | did not find any defunct processes belonging to 1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:43,898 | INFO     | did not find any defunct processes belonging to 1180780
[2026-03-11 05:01:40] 2026-03-11 09:00:43,898 | INFO     | ready for new job
[2026-03-11 05:01:40] 2026-03-11 09:00:43,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:01:40] 2026-03-11 09:00:43,900 | INFO     | **************************************
[2026-03-11 05:01:40] 2026-03-11 09:00:43,900 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:01:40] 2026-03-11 09:00:43,900 | INFO     | **************************************
[2026-03-11 05:01:40] 2026-03-11 09:00:43,900 | INFO     | 
[2026-03-11 05:01:40] 2026-03-11 09:00:43,904 | INFO     | architecture information:
[2026-03-11 05:01:40] 2026-03-11 09:00:43,909 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:01:40] 2026-03-11 09:00:44,050 | INFO     | cat /etc/os-release:
[2026-03-11 05:01:40] NAME="CentOS Linux"
[2026-03-11 05:01:40] VERSION="7 (Core)"
[2026-03-11 05:01:40] ID="centos"
[2026-03-11 05:01:40] ID_LIKE="rhel fedora"
[2026-03-11 05:01:40] VERSION_ID="7"
[2026-03-11 05:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:01:40] ANSI_COLOR="0;31"
[2026-03-11 05:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:01:40] HOME_URL="https://www.centos.org/"
[2026-03-11 05:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:01:40] 
[2026-03-11 05:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:01:40] 
[2026-03-11 05:01:40] 2026-03-11 09:00:44,056 | INFO     | **************************************
[2026-03-11 05:01:40] 2026-03-11 09:00:44,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-11 05:01:40] 2026-03-11 09:00:44,721 | INFO     | sufficient remaining disk space (167801520128 B)
[2026-03-11 05:01:40] 2026-03-11 09:00:44,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:01:40] 2026-03-11 09:00:44,722 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:01:40] 2026-03-11 09:00:44,722 | INFO     | update_server=False
[2026-03-11 05:01:40] 2026-03-11 09:00:44,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:01:40] 2026-03-11 09:00:44,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:01:40] 2026-03-11 09:00:44,726 | INFO     | all data control threads have been joined
[2026-03-11 05:01:40] 2026-03-11 09:00:45,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:01:40] 2026-03-11 09:00:45,239 | INFO     | aborting loop
[2026-03-11 05:01:40] 2026-03-11 09:00:45,728 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:45,732 | INFO     | [data] control thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:45,759 | INFO     | all job control threads have been joined
[2026-03-11 05:01:40] 2026-03-11 09:00:46,169 | INFO     | all payload control threads have been joined
[2026-03-11 05:01:40] 2026-03-11 09:00:46,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,240 | INFO     | [job] validate thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,247 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,322 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,322 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,322 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,323 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,656 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,734 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,764 | INFO     | [job] control thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:46,780 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:47,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:01:40] 2026-03-11 09:00:47,225 | INFO     | [payload] control thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:47,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:01:40] 2026-03-11 09:00:48,417 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:00:51,221 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:01:40] 2026-03-11 09:01:10,963 | INFO     | 6526s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-11 05:01:40] 2026-03-11 09:01:21,719 | INFO     | PID=1126570 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 05:01:40] 2026-03-11 09:01:21,752 | INFO     | .. there are 116 such processes running
[2026-03-11 05:01:40] 2026-03-11 09:01:21,753 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:01:40] 2026-03-11 09:01:21,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:01:40] 2026-03-11 09:01:21,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:01:40] 2026-03-11 09:01:30,835 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:01:40] 2026-03-11 09:01:31,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241303144256)>', '<ExcThread(monitor, started 140240815650560)>']
[2026-03-11 05:01:40] 2026-03-11 09:01:31,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:01:40] 2026-03-11 09:01:31,826 | INFO     | [monitor] control thread has ended
[2026-03-11 05:01:40] 2026-03-11 09:01:36,539 | INFO     | all workflow threads have been joined
[2026-03-11 05:01:40] 2026-03-11 09:01:36,539 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:01:40] 2026-03-11 09:01:36,539 | INFO     | traces error code: 0
[2026-03-11 05:01:40] 2026-03-11 09:01:36,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:01:40] 2026-03-11 09:01:37,833 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:01:40] 2026-03-11 09:01:37,879 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:01:40] 2026-03-11 09:01:37,930 [wrapper] pilotpid: 1126570
[2026-03-11 05:01:40] 2026-03-11 09:01:37,978 [wrapper] Pilot exit status: 0
[2026-03-11 05:01:40] 2026-03-11 09:01:38,206 [wrapper] pandaids: 7036184070
[2026-03-11 05:01:40] 2026-03-11 09:01:39,109 [wrapper] cleanup supervisor_pilot 2903921 1126571
[2026-03-11 05:01:40] 2026-03-11 09:01:39,156 [wrapper] Test setup, not cleaning
[2026-03-11 05:01:40] 2026-03-11 09:01:39,199 [wrapper] apfmon messages muted
[2026-03-11 05:01:40] 2026-03-11 09:01:39,265 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:01:40] 2026-03-11 09:01:39,307 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:01:40]  *** Error codes and diagnostics ***
[2026-03-11 05:01:40]     "exeErrorCode": 0,
[2026-03-11 05:01:40]     "exeErrorDiag": "",
[2026-03-11 05:01:40]     "pilotErrorCode": 0,
[2026-03-11 05:01:40]     "pilotErrorDiag": "",
[2026-03-11 05:01:40]  *** Listing of results directory ***
[2026-03-11 05:01:40] total 483936
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 22:05 pilot3.tar.gz
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 22:05 queuedata.json
[2026-03-11 05:01:40] -rwx------. 1 boincer umatlas     36322 Mar  2 22:05 runpilot2-wrapper.sh
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas       100 Mar 11 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:01:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 03:08 run_atlas
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas       105 Mar 11 03:08 job.xml
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas 277376796 Mar 11 03:08 EVNT.48220221._000089.pool.root.1
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas    597957 Mar 11 03:08 input.tar.gz
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 03:08 start_atlas.sh
[2026-03-11 05:01:40] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 03:08 shared
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas         0 Mar 11 03:08 boinc_lockfile
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas      2561 Mar 11 03:09 pandaJob.out
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas        57 Mar 11 03:09 setup.sh.local
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas   1511578 Mar 11 03:11 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas       430 Mar 11 03:13 workernode_map.json
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas   1006644 Mar 11 03:13 agis_schedconf.cvmfs.json
[2026-03-11 05:01:40] drwx------. 5 boincer umatlas      4096 Mar 11 03:13 pilot3
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas 211931527 Mar 11 04:58 HITS.48838586._002276.pool.root.1
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas       529 Mar 11 04:58 boinc_task_state.xml
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas      7171 Mar 11 05:00 init_data.xml
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas      1045 Mar 11 05:00 memory_monitor_summary.json
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas    377692 Mar 11 05:00 log.48838586._002276.job.log.tgz.1
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas      6356 Mar 11 05:00 heartbeat.json
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas        95 Mar 11 05:01 pilot_heartbeat.json
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 05:01 boinc_mmap_file
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas        27 Mar 11 05:01 wrapper_checkpoint.txt
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas      4937 Mar 11 05:01 pilotlog.txt
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas    770576 Mar 11 05:01 log.48838586._002276.job.log.1
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas       357 Mar 11 05:01 output.list
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas       620 Mar 11 05:01 runtime_log
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas   1167360 Mar 11 05:01 result.tar.gz
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas      9333 Mar 11 05:01 runtime_log.err
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas       654 Mar 11 05:01 9kwMDmFGVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2PFLDmbRygVm.diag
[2026-03-11 05:01:40] -rw-r--r--. 1 boincer umatlas     21034 Mar 11 05:01 stderr.txt
[2026-03-11 05:01:40] HITS file was successfully produced:
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas 211931527 Mar 11 04:58 shared/HITS.pool.root.1
[2026-03-11 05:01:40]  *** Contents of shared directory: ***
[2026-03-11 05:01:40] total 479592
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas 277376796 Mar 11 03:08 ATLAS.root_0
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas    597957 Mar 11 03:08 input.tar.gz
[2026-03-11 05:01:40] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 03:08 start_atlas.sh
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas 211931527 Mar 11 04:58 HITS.pool.root.1
[2026-03-11 05:01:40] -rw-------. 1 boincer umatlas   1167360 Mar 11 05:01 result.tar.gz
05:01:43 (1076771): run_atlas exited; CPU time 26047.890812
05:01:43 (1076771): called boinc_finish(0)

</stderr_txt>
]]>

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