Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:37:13 (788896): wrapper (7.7.26015): starting
06:37:13 (788896): wrapper: running run_atlas (--nthreads 4)
[2026-03-11 06:37:13] Arguments: --nthreads 4
[2026-03-11 06:37:13] Threads: 4
[2026-03-11 06:37:13] Checking for CVMFS
[2026-03-11 06:37:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 06:37:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 06:37:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 06:37:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 06:37:14] 2.13.3.0 1760492 7242 50356 157151 1 50 3549420 4096001 1832 130560 0 5793799 99.991 255315 828 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-11 06:37:14] CVMFS is ok
[2026-03-11 06:37:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 06:37:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-11 06:37:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-11 06:37:14] Further information can be found at the LHC@home message board.
[2026-03-11 06:37:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 06:37:14] Checking for apptainer binary...
[2026-03-11 06:37:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 06:37:14] Running /usr/bin/apptainer --version
[2026-03-11 06:37:14] apptainer version 1.4.5
[2026-03-11 06:37:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 06:37:14] OptiPlex7070-Ubuntu
[2026-03-11 06:37:14] apptainer works
[2026-03-11 06:37:14] Set ATHENA_PROC_NUMBER=4
[2026-03-11 06:37:14] Set ATHENA_CORE_NUMBER=4
[2026-03-11 06:37:14] Starting ATLAS job with PandaID=7049536082
[2026-03-11 06:37:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 09:22:49]  *** The last 200 lines of the pilot log: ***
[2026-03-11 09:22:49] 2026-03-11 13:22:11,527 | INFO     | job 7049536082 has state=finished
[2026-03-11 09:22:49] 2026-03-11 13:22:11,527 | INFO     | preparing for final server update for job 7049536082 in state='finished'
[2026-03-11 09:22:49] 2026-03-11 13:22:11,527 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/0/PanDA_Pilot-7049536082/jobReport.json
[2026-03-11 09:22:49] 2026-03-11 13:22:11,529 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/0/workernode_map.json
[2026-03-11 09:22:49] 2026-03-11 13:22:11,529 | INFO     | this job has now completed (state=finished)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,529 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,529 | INFO     | log transfer has been attempted: DONE
[2026-03-11 09:22:49] 2026-03-11 13:22:11,529 | INFO     | job 7049536082 has finished - writing final server update
[2026-03-11 09:22:49] 2026-03-11 13:22:11,530 | INFO     | total number of processed events: 400 (read)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,532 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/0/PanDA_Pilot-7049536082/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,533 | INFO     | extracted standard info from prmon json
[2026-03-11 09:22:49] 2026-03-11 13:22:11,533 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 09:22:49] 2026-03-11 13:22:11,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 09:22:49] 2026-03-11 13:22:11,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 09:22:49] 2026-03-11 13:22:11,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 09:22:49] 2026-03-11 13:22:11,536 | INFO     | fitting pss+swap vs Time
[2026-03-11 09:22:49] 2026-03-11 13:22:11,536 | INFO     | sum of square deviations: 1318277740.5
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | sum of deviations: -27190565414.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | mean x: 1773230376.5
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | mean y: 2375219.814814815
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | intersect: 36576713892.95961
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | chi2: 1.6111929179602331
[2026-03-11 09:22:49] 2026-03-11 13:22:11,537 | INFO     | sum of square deviations: 1199940638.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,538 | INFO     | sum of deviations: -25932518371.999992
[2026-03-11 09:22:49] 2026-03-11 13:22:11,538 | INFO     | mean x: 1773230224.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,538 | INFO     | mean y: 2376841.5541401273
[2026-03-11 09:22:49] 2026-03-11 13:22:11,538 | INFO     | intersect: 38324543710.00022
[2026-03-11 09:22:49] 2026-03-11 13:22:11,539 | INFO     | chi2: 1.6052964305525574
[2026-03-11 09:22:49] 2026-03-11 13:22:11,539 | INFO     | current chi2=1.6052964305525574 (change=0.3659702908290224 %)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,539 | INFO     | right removable region: 156
[2026-03-11 09:22:49] 2026-03-11 13:22:11,539 | INFO     | sum of square deviations: 1199940638.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | sum of deviations: -42421973468.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | mean x: 1773230529.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | mean y: 2394348.01910828
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | intersect: 62692110882.051186
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | chi2: 0.35068497744738364
[2026-03-11 09:22:49] 2026-03-11 13:22:11,540 | INFO     | current chi2=0.35068497744738364 (change=78.2344514093725 %)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,541 | INFO     | sum of square deviations: 1088905998.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,541 | INFO     | sum of deviations: -35275575655.50001
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | mean x: 1773230681.5
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | mean y: 2384526.414473684
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | intersect: 57446951068.2429
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | chi2: 0.3356048910356245
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | current chi2=0.3356048910356245 (change=4.3001803275196515 %)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | left removable region: 20
[2026-03-11 09:22:49] 2026-03-11 13:22:11,542 | INFO     | sum of square deviations: 779958810.0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,543 | INFO     | sum of deviations: -18648156737.5
[2026-03-11 09:22:49] 2026-03-11 13:22:11,543 | INFO     | mean x: 1773230803.5
[2026-03-11 09:22:49] 2026-03-11 13:22:11,543 | INFO     | mean y: 2362306.904411765
[2026-03-11 09:22:49] 2026-03-11 13:22:11,543 | INFO     | intersect: 42398813929.04977
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | chi2: 0.25418041737600333
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | current memory leak: -23.91 B/s (using 136 data points, chi2=0.25)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | could have reported an average CPU frequency of 3338 MHz (9 samples)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | ..............................
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | . Timing measurements:
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | . get job = 0 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | . initial setup = 5 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,544 | INFO     | . payload setup = 3 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,545 | INFO     | . stage-in = 0 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,545 | INFO     | . payload execution = 9861 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,545 | INFO     | . stage-out = 0 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,545 | INFO     | . log creation = 0 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,545 | INFO     | ..............................
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | 
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | job summary report
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | --------------------------------------------------
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | PanDA job id: 7049536082
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | task id: 48967085
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | errors: (none)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | pilot state: finished 
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | transexitcode: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | exeerrorcode: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,616 | INFO     | exeerrordiag: 
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | exitcode: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | exitmsg: OK
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | cpuconsumptiontime: 38395 s
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | nevents: 400
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | neventsw: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | pid: 797583
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | pgrp: 797583
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | corecount: 4
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | event service: False
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | sizes: {0: 2279876, 1: 2280280, 11: 2280280, 9869: 2308987, 9870: 2318069, 9873: 2318271}
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | --------------------------------------------------
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | 
[2026-03-11 09:22:49] 2026-03-11 13:22:11,617 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/0
[2026-03-11 09:22:49] 2026-03-11 13:22:11,630 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,630 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | job 7049536082 has completed (purged errors)
[2026-03-11 09:22:49] 2026-03-11 13:22:11,632 | INFO     | overall cleanup function is called
[2026-03-11 09:22:49] 2026-03-11 13:22:12,639 | INFO     | --- collectZombieJob: --- 10, [797583]
[2026-03-11 09:22:49] 2026-03-11 13:22:12,639 | INFO     | zombie collector waiting for pid 797583
[2026-03-11 09:22:49] 2026-03-11 13:22:12,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 09:22:49] 2026-03-11 13:22:12,640 | INFO     | collected zombie processes
[2026-03-11 09:22:49] 2026-03-11 13:22:12,640 | INFO     | will attempt to kill all subprocesses of pid=797583
[2026-03-11 09:22:49] 2026-03-11 13:22:12,778 | INFO     | process IDs to be killed: [797583] (in reverse order)
[2026-03-11 09:22:49] 2026-03-11 13:22:12,815 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 09:22:49] 2026-03-11 13:22:12,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 09:22:49] 2026-03-11 13:22:12,819 | INFO     | did not find any defunct processes belonging to 797583
[2026-03-11 09:22:49] 2026-03-11 13:22:12,821 | INFO     | did not find any defunct processes belonging to 797583
[2026-03-11 09:22:49] 2026-03-11 13:22:12,821 | INFO     | ready for new job
[2026-03-11 09:22:49] 2026-03-11 13:22:12,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 09:22:49] 2026-03-11 13:22:12,823 | INFO     | **************************************
[2026-03-11 09:22:49] 2026-03-11 13:22:12,823 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 09:22:49] 2026-03-11 13:22:12,823 | INFO     | **************************************
[2026-03-11 09:22:49] 2026-03-11 13:22:12,823 | INFO     | 
[2026-03-11 09:22:49] 2026-03-11 13:22:12,824 | INFO     | architecture information:
[2026-03-11 09:22:49] 2026-03-11 13:22:12,824 | INFO     | executing command: cat /etc/os-release
[2026-03-11 09:22:49] 2026-03-11 13:22:12,835 | INFO     | cat /etc/os-release:
[2026-03-11 09:22:49] NAME="CentOS Linux"
[2026-03-11 09:22:49] VERSION="7 (Core)"
[2026-03-11 09:22:49] ID="centos"
[2026-03-11 09:22:49] ID_LIKE="rhel fedora"
[2026-03-11 09:22:49] VERSION_ID="7"
[2026-03-11 09:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 09:22:49] ANSI_COLOR="0;31"
[2026-03-11 09:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 09:22:49] HOME_URL="https://www.centos.org/"
[2026-03-11 09:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 09:22:49] 
[2026-03-11 09:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 09:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 09:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 09:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 09:22:49] 
[2026-03-11 09:22:49] 2026-03-11 13:22:12,835 | INFO     | **************************************
[2026-03-11 09:22:49] 2026-03-11 13:22:13,338 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/0
[2026-03-11 09:22:49] 2026-03-11 13:22:13,350 | INFO     | sufficient remaining disk space (411028160512 B)
[2026-03-11 09:22:49] 2026-03-11 13:22:13,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 09:22:49] 2026-03-11 13:22:13,351 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 09:22:49] 2026-03-11 13:22:13,351 | INFO     | update_server=False
[2026-03-11 09:22:49] 2026-03-11 13:22:13,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 09:22:49] 2026-03-11 13:22:13,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 09:22:49] 2026-03-11 13:22:13,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 09:22:49] 2026-03-11 13:22:13,879 | INFO     | aborting loop
[2026-03-11 09:22:49] 2026-03-11 13:22:14,051 | INFO     | all job control threads have been joined
[2026-03-11 09:22:49] 2026-03-11 13:22:14,350 | INFO     | all data control threads have been joined
[2026-03-11 09:22:49] 2026-03-11 13:22:14,356 | INFO     | [job] queue monitor thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,356 | INFO     | [job] retrieve thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,373 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,478 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,637 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 09:22:49] 2026-03-11 13:22:14,650 | INFO     | all payload control threads have been joined
[2026-03-11 09:22:49] 2026-03-11 13:22:14,740 | INFO     | [data] copytool_in thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,884 | INFO     | [job] job monitor thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,887 | INFO     | [payload] failed_post thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:14,918 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:15,056 | INFO     | [job] control thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:15,206 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 09:22:49] 2026-03-11 13:22:15,351 | INFO     | [data] control thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:15,390 | INFO     | [payload] validate_post thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:15,626 | INFO     | [job] validate thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:15,654 | INFO     | [payload] control thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:16,643 | INFO     | [data] copytool_out thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:19,211 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:22,013 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-03-11 09:22:49] 2026-03-11 13:22:23,454 | INFO     | job.realtimelogging is not enabled
[2026-03-11 09:22:49] 2026-03-11 13:22:24,459 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 09:22:49] 2026-03-11 13:22:42,899 | INFO     | PID=793076 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 09:22:49] 2026-03-11 13:22:42,899 | INFO     | .. there are 3 such processes running
[2026-03-11 09:22:49] 2026-03-11 13:22:42,899 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 09:22:49] 2026-03-11 13:22:42,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 09:22:49] 2026-03-11 13:22:42,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 09:22:49] 2026-03-11 13:22:43,648 | INFO     | [monitor] cgroup control has ended
[2026-03-11 09:22:49] 2026-03-11 13:22:43,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130147806996288)>', '<ExcThread(monitor, started 130147164350208)>']
[2026-03-11 09:22:49] 2026-03-11 13:22:44,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 09:22:49] 2026-03-11 13:22:44,910 | INFO     | [monitor] control thread has ended
[2026-03-11 09:22:49] 2026-03-11 13:22:48,987 | INFO     | all workflow threads have been joined
[2026-03-11 09:22:49] 2026-03-11 13:22:48,987 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 09:22:49] 2026-03-11 13:22:48,987 | INFO     | traces error code: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:48,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 09:22:49] 2026-03-11 13:22:49,045 [wrapper] ==== pilot stdout END ====
[2026-03-11 09:22:49] 2026-03-11 13:22:49,046 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 09:22:49] 2026-03-11 13:22:49,048 [wrapper] pilotpid: 793076
[2026-03-11 09:22:49] 2026-03-11 13:22:49,049 [wrapper] Pilot exit status: 0
[2026-03-11 09:22:49] 2026-03-11 13:22:49,057 [wrapper] pandaids: 7049536082
[2026-03-11 09:22:49] 2026-03-11 13:22:49,073 [wrapper] cleanup supervisor_pilot  859831 793077
[2026-03-11 09:22:49] 2026-03-11 13:22:49,075 [wrapper] Test setup, not cleaning
[2026-03-11 09:22:49] 2026-03-11 13:22:49,076 [wrapper] apfmon messages muted
[2026-03-11 09:22:49] 2026-03-11 13:22:49,078 [wrapper] ==== wrapper stdout END ====
[2026-03-11 09:22:49] 2026-03-11 13:22:49,079 [wrapper] ==== wrapper stderr END ====
[2026-03-11 09:22:49]  *** Error codes and diagnostics ***
[2026-03-11 09:22:49]     "exeErrorCode": 0,
[2026-03-11 09:22:49]     "exeErrorDiag": "",
[2026-03-11 09:22:49]     "pilotErrorCode": 0,
[2026-03-11 09:22:49]     "pilotErrorDiag": "",
[2026-03-11 09:22:49]  *** Listing of results directory ***
[2026-03-11 09:22:49] total 406248
[2026-03-11 09:22:49] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 11 02:14 queuedata.json
[2026-03-11 09:22:49] -rwx------ 1 whitlerd whitlerd     36322 Mar 11 02:14 runpilot2-wrapper.sh
[2026-03-11 09:22:49] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 11 02:14 pilot3.tar.gz
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 11 06:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 09:22:49] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 11 06:37 run_atlas
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 11 06:37 job.xml
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd 212050103 Mar 11 06:37 EVNT.48967083._000337.pool.root.1
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 06:37 start_atlas.sh
[2026-03-11 09:22:49] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 11 06:37 shared
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd    597509 Mar 11 06:37 input.tar.gz
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 11 06:37 init_data.xml
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 06:37 boinc_setup_complete
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 11 06:37 boinc_lockfile
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 11 06:37 pandaJob.out
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd   1007007 Mar 11 06:37 agis_schedconf.cvmfs.json
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd   1511578 Mar 11 06:37 agis_ddmendpoints.agis.ALL.json
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd       439 Mar 11 06:37 workernode_map.json
[2026-03-11 09:22:49] drwx------ 5 whitlerd whitlerd      4096 Mar 11 06:37 pilot3
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 11 09:21 boinc_task_state.xml
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd 196414456 Mar 11 09:21 HITS.48967085._008350.pool.root.1
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd        95 Mar 11 09:21 pilot_heartbeat.json
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd      1032 Mar 11 09:22 memory_monitor_summary.json
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd    355836 Mar 11 09:22 log.48967085._008350.job.log.tgz.1
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd      6376 Mar 11 09:22 heartbeat.json
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 09:22 boinc_mmap_file
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd        28 Mar 11 09:22 wrapper_checkpoint.txt
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd      4905 Mar 11 09:22 pilotlog.txt
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd   1444347 Mar 11 09:22 log.48967085._008350.job.log.1
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd       357 Mar 11 09:22 output.list
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 09:22 runtime_log
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd   1812480 Mar 11 09:22 result.tar.gz
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar 11 09:22 runtime_log.err
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd       658 Mar 11 09:22 A1nNDmw0RK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFtfLDmnpupNn.diag
[2026-03-11 09:22:49] -rw-rw-r-- 1 whitlerd whitlerd     21319 Mar 11 09:22 stderr.txt
[2026-03-11 09:22:49] HITS file was successfully produced:
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd 196414456 Mar 11 09:21 shared/HITS.pool.root.1
[2026-03-11 09:22:49]  *** Contents of shared directory: ***
[2026-03-11 09:22:49] total 401276
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd 212050103 Mar 11 06:37 ATLAS.root_0
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 11 06:37 start_atlas.sh
[2026-03-11 09:22:49] -rw-r--r-- 2 whitlerd whitlerd    597509 Mar 11 06:37 input.tar.gz
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd 196414456 Mar 11 09:21 HITS.pool.root.1
[2026-03-11 09:22:49] -rw------- 1 whitlerd whitlerd   1812480 Mar 11 09:22 result.tar.gz
09:22:50 (788896): run_atlas exited; CPU time 38566.420931
09:22:50 (788896): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN