Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:07:46 (14551): wrapper (7.7.26015): starting
21:07:46 (14551): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 21:07:46] Arguments: --nthreads 8
[2026-03-11 21:07:46] Threads: 8
[2026-03-11 21:07:46] Checking for CVMFS
[2026-03-11 21:07:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 21:07:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 21:07:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 21:07:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 21:07:56] 2.11.2.0 25223 21875 105200 157168 1 54 20232741 25165824 4890 130560 152 6420989 99.823 3133649 150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-11 21:07:56] CVMFS is ok
[2026-03-11 21:07:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 21:07:56] Checking for apptainer binary...
[2026-03-11 21:07:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 21:07:56] Running /usr/bin/apptainer --version
[2026-03-11 21:07:56] apptainer version 1.3.2-1.el7
[2026-03-11 21:07:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 21:08:10] cg-vwn444.simple-grid.lan
[2026-03-11 21:08:10] apptainer works
[2026-03-11 21:08:10] Set ATHENA_PROC_NUMBER=8
[2026-03-11 21:08:10] Set ATHENA_CORE_NUMBER=8
[2026-03-11 21:08:10] Starting ATLAS job with PandaID=7043090522
[2026-03-11 21:08:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 01:10:56]  *** The last 200 lines of the pilot log: ***
[2026-03-12 01:10:56] 2026-03-12 00:09:48,373 | INFO     | time since job start (14126s) is within the limit (345600.0s)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,820 | INFO     | job 7043090522 has state=finished
[2026-03-12 01:10:56] 2026-03-12 00:09:48,820 | INFO     | preparing for final server update for job 7043090522 in state='finished'
[2026-03-12 01:10:56] 2026-03-12 00:09:48,820 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-7043090522/jobReport.json
[2026-03-12 01:10:56] 2026-03-12 00:09:48,823 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-03-12 01:10:56] 2026-03-12 00:09:48,823 | INFO     | this job has now completed (state=finished)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,824 | INFO     | log transfer has been attempted: DONE
[2026-03-12 01:10:56] 2026-03-12 00:09:48,824 | INFO     | job 7043090522 has finished - writing final server update
[2026-03-12 01:10:56] 2026-03-12 00:09:48,824 | INFO     | total number of processed events: 400 (read)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,826 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7043090522/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,827 | INFO     | extracted standard info from prmon json
[2026-03-12 01:10:56] 2026-03-12 00:09:48,827 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 01:10:56] 2026-03-12 00:09:48,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 01:10:56] 2026-03-12 00:09:48,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 01:10:56] 2026-03-12 00:09:48,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 01:10:56] 2026-03-12 00:09:48,832 | INFO     | fitting pss+swap vs Time
[2026-03-12 01:10:56] 2026-03-12 00:09:48,832 | INFO     | sum of square deviations: 3627000098.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,834 | INFO     | sum of deviations: 64191181572.00002
[2026-03-12 01:10:56] 2026-03-12 00:09:48,835 | INFO     | mean x: 1773267230.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,835 | INFO     | mean y: 2441218.1365638766
[2026-03-12 01:10:56] 2026-03-12 00:09:48,835 | INFO     | intersect: -31381103215.560757
[2026-03-12 01:10:56] 2026-03-12 00:09:48,835 | INFO     | chi2: 5.103058026847275
[2026-03-12 01:10:56] 2026-03-12 00:09:48,836 | INFO     | sum of square deviations: 3392567795.5
[2026-03-12 01:10:56] 2026-03-12 00:09:48,838 | INFO     | sum of deviations: 78523859454.49997
[2026-03-12 01:10:56] 2026-03-12 00:09:48,838 | INFO     | mean x: 1773267077.5
[2026-03-12 01:10:56] 2026-03-12 00:09:48,838 | INFO     | mean y: 2450356.2657657657
[2026-03-12 01:10:56] 2026-03-12 00:09:48,838 | INFO     | intersect: -41041320369.141365
[2026-03-12 01:10:56] 2026-03-12 00:09:48,838 | INFO     | chi2: 4.270200503556986
[2026-03-12 01:10:56] 2026-03-12 00:09:48,843 | INFO     | current chi2=4.270200503556986 (change=16.320753534618092 %)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,843 | INFO     | right removable region: 221
[2026-03-12 01:10:56] 2026-03-12 00:09:48,843 | INFO     | sum of square deviations: 3392567795.5
[2026-03-12 01:10:56] 2026-03-12 00:09:48,845 | INFO     | sum of deviations: -7111529419.5
[2026-03-12 01:10:56] 2026-03-12 00:09:48,845 | INFO     | mean x: 1773267382.5
[2026-03-12 01:10:56] 2026-03-12 00:09:48,845 | INFO     | mean y: 2487511.626126126
[2026-03-12 01:10:56] 2026-03-12 00:09:48,846 | INFO     | intersect: 3719625655.7821927
[2026-03-12 01:10:56] 2026-03-12 00:09:48,846 | INFO     | chi2: 1.2208016832650346
[2026-03-12 01:10:56] 2026-03-12 00:09:48,846 | INFO     | current chi2=1.2208016832650346 (change=76.07705660326855 %)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,846 | INFO     | sum of square deviations: 3168461268.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,848 | INFO     | sum of deviations: -20879881967.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,848 | INFO     | mean x: 1773267535.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,848 | INFO     | mean y: 2496779.115207373
[2026-03-12 01:10:56] 2026-03-12 00:09:48,848 | INFO     | intersect: 11688174366.73628
[2026-03-12 01:10:56] 2026-03-12 00:09:48,849 | INFO     | chi2: 0.9656899185947115
[2026-03-12 01:10:56] 2026-03-12 00:09:48,849 | INFO     | current chi2=0.9656899185947115 (change=20.89706855482264 %)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,849 | INFO     | left removable region: 20
[2026-03-12 01:10:56] 2026-03-12 00:09:48,849 | INFO     | sum of square deviations: 2518000700.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,851 | INFO     | sum of deviations: 6486443235.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,851 | INFO     | mean x: 1773267657.0
[2026-03-12 01:10:56] 2026-03-12 00:09:48,851 | INFO     | mean y: 2498550.5074626864
[2026-03-12 01:10:56] 2026-03-12 00:09:48,851 | INFO     | intersect: -4565490647.268356
[2026-03-12 01:10:56] 2026-03-12 00:09:48,851 | INFO     | chi2: 0.0008345163589610364
[2026-03-12 01:10:56] 2026-03-12 00:09:48,852 | INFO     | current memory leak: 2.58 B/s (using 201 data points, chi2=0.00)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,852 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | ..............................
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . Timing measurements:
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . get job = 0 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . initial setup = 106 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . payload setup = 142 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . stage-in = 0 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . payload execution = 13959 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . stage-out = 3 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | . log creation = 0 s
[2026-03-12 01:10:56] 2026-03-12 00:09:48,853 | INFO     | ..............................
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | 
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | job summary report
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | --------------------------------------------------
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | PanDA job id: 7043090522
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | task id: 48955006
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | errors: (none)
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 01:10:56] 2026-03-12 00:09:49,113 | INFO     | pilot state: finished 
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | transexitcode: 0
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | exeerrorcode: 0
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | exeerrordiag: 
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | exitcode: 0
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | exitmsg: OK
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | cpuconsumptiontime: 52993 s
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | nevents: 400
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | neventsw: 0
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | pid: 23151
[2026-03-12 01:10:56] 2026-03-12 00:09:49,114 | INFO     | pgrp: 23151
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | corecount: 8
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | event service: False
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | sizes: {0: 2279735, 1: 2280196, 12: 2280196, 14105: 2310504, 14106: 2310503, 14109: 2319585, 14112: 2319769, 14114: 2319963}
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | --------------------------------------------------
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | 
[2026-03-12 01:10:56] 2026-03-12 00:09:49,115 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-12 01:10:56] 2026-03-12 00:09:49,455 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,455 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,457 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 01:10:56] 2026-03-12 00:09:49,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,458 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 01:10:56] 2026-03-12 00:09:49,458 | INFO     | job 7043090522 has completed (purged errors)
[2026-03-12 01:10:56] 2026-03-12 00:09:49,458 | INFO     | overall cleanup function is called
[2026-03-12 01:10:56] 2026-03-12 00:09:50,467 | INFO     | --- collectZombieJob: --- 10, [23151]
[2026-03-12 01:10:56] 2026-03-12 00:09:50,467 | INFO     | zombie collector waiting for pid 23151
[2026-03-12 01:10:56] 2026-03-12 00:09:50,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 01:10:56] 2026-03-12 00:09:50,467 | INFO     | collected zombie processes
[2026-03-12 01:10:56] 2026-03-12 00:09:50,468 | INFO     | will attempt to kill all subprocesses of pid=23151
[2026-03-12 01:10:56] 2026-03-12 00:09:50,600 | INFO     | process IDs to be killed: [23151] (in reverse order)
[2026-03-12 01:10:56] 2026-03-12 00:09:51,368 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 01:10:56] 2026-03-12 00:09:51,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 01:10:56] 2026-03-12 00:09:51,375 | INFO     | did not find any defunct processes belonging to 23151
[2026-03-12 01:10:56] 2026-03-12 00:09:51,383 | INFO     | did not find any defunct processes belonging to 23151
[2026-03-12 01:10:56] 2026-03-12 00:09:51,384 | INFO     | ready for new job
[2026-03-12 01:10:56] 2026-03-12 00:09:51,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 01:10:56] 2026-03-12 00:09:51,386 | INFO     | **************************************
[2026-03-12 01:10:56] 2026-03-12 00:09:51,386 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 01:10:56] 2026-03-12 00:09:51,386 | INFO     | **************************************
[2026-03-12 01:10:56] 2026-03-12 00:09:51,386 | INFO     | 
[2026-03-12 01:10:56] 2026-03-12 00:09:51,392 | INFO     | pilot is running in a VM
[2026-03-12 01:10:56] 2026-03-12 00:09:51,392 | INFO     | architecture information:
[2026-03-12 01:10:56] 2026-03-12 00:09:51,405 | INFO     | executing command: cat /etc/os-release
[2026-03-12 01:10:56] 2026-03-12 00:09:51,693 | INFO     | cat /etc/os-release:
[2026-03-12 01:10:56] NAME="CentOS Linux"
[2026-03-12 01:10:56] VERSION="7 (Core)"
[2026-03-12 01:10:56] ID="centos"
[2026-03-12 01:10:56] ID_LIKE="rhel fedora"
[2026-03-12 01:10:56] VERSION_ID="7"
[2026-03-12 01:10:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 01:10:56] ANSI_COLOR="0;31"
[2026-03-12 01:10:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 01:10:56] HOME_URL="https://www.centos.org/"
[2026-03-12 01:10:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 01:10:56] 
[2026-03-12 01:10:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 01:10:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 01:10:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 01:10:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 01:10:56] 
[2026-03-12 01:10:56] 2026-03-12 00:09:51,693 | INFO     | **************************************
[2026-03-12 01:10:56] 2026-03-12 00:09:52,197 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-12 01:10:56] 2026-03-12 00:09:52,297 | INFO     | sufficient remaining disk space (494781071360 B)
[2026-03-12 01:10:56] 2026-03-12 00:09:52,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 01:10:56] 2026-03-12 00:09:52,298 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 01:10:56] 2026-03-12 00:09:52,298 | INFO     | update_server=False
[2026-03-12 01:10:56] 2026-03-12 00:09:52,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 01:10:56] 2026-03-12 00:09:52,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 01:10:56] 2026-03-12 00:09:52,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:10:56] 2026-03-12 00:09:52,384 | INFO     | aborting loop
[2026-03-12 01:10:56] 2026-03-12 00:09:52,498 | INFO     | all job control threads have been joined
[2026-03-12 01:10:56] 2026-03-12 00:09:52,827 | INFO     | all data control threads have been joined
[2026-03-12 01:10:56] 2026-03-12 00:09:53,064 | INFO     | all payload control threads have been joined
[2026-03-12 01:10:56] 2026-03-12 00:09:53,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 01:10:56] 2026-03-12 00:09:53,305 | INFO     | [job] retrieve thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,390 | INFO     | [job] job monitor thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,481 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,504 | INFO     | [job] control thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,755 | INFO     | [data] copytool_in thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,833 | INFO     | [data] control thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,887 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:53,941 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 01:10:56] 2026-03-12 00:09:54,070 | INFO     | [payload] control thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,253 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,256 | INFO     | [job] validate thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,308 | INFO     | [data] copytool_out thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,599 | INFO     | [payload] validate_post thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:54,890 | INFO     | [payload] failed_post thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:55,021 | INFO     | [job] queue monitor thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:09:57,185 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 01:10:56] 2026-03-12 00:10:21,577 | INFO     | PID=18659 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-12 01:10:56] 2026-03-12 00:10:21,577 | INFO     | .. there are 9 such processes running
[2026-03-12 01:10:56] 2026-03-12 00:10:21,578 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 01:10:56] 2026-03-12 00:10:21,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 01:10:56] 2026-03-12 00:10:21,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 01:10:56] 2026-03-12 00:10:46,352 | INFO     | [monitor] cgroup control has ended
[2026-03-12 01:10:56] 2026-03-12 00:10:46,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140598090598208)>', '<ExcThread(monitor, started 140597423761152)>']
[2026-03-12 01:10:56] 2026-03-12 00:10:47,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 01:10:56] 2026-03-12 00:10:47,732 | INFO     | [monitor] control thread has ended
[2026-03-12 01:10:56] 2026-03-12 00:10:51,808 | INFO     | all workflow threads have been joined
[2026-03-12 01:10:56] 2026-03-12 00:10:51,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 01:10:56] 2026-03-12 00:10:51,808 | INFO     | traces error code: 0
[2026-03-12 01:10:56] 2026-03-12 00:10:51,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 01:10:56] 2026-03-12 00:10:52,111 [wrapper] ==== pilot stdout END ====
[2026-03-12 01:10:56] 2026-03-12 00:10:52,203 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 01:10:56] 2026-03-12 00:10:52,256 [wrapper] pilotpid: 18659
[2026-03-12 01:10:56] 2026-03-12 00:10:52,357 [wrapper] Pilot exit status: 0
[2026-03-12 01:10:56] 2026-03-12 00:10:52,728 [wrapper] pandaids: 7043090522
[2026-03-12 01:10:56] 2026-03-12 00:10:53,539 [wrapper] cleanup supervisor_pilot 14172 18660
[2026-03-12 01:10:56] 2026-03-12 00:10:53,602 [wrapper] Test setup, not cleaning
[2026-03-12 01:10:56] 2026-03-12 00:10:53,675 [wrapper] apfmon messages muted
[2026-03-12 01:10:56] 2026-03-12 00:10:53,767 [wrapper] ==== wrapper stdout END ====
[2026-03-12 01:10:56] 2026-03-12 00:10:53,837 [wrapper] ==== wrapper stderr END ====
[2026-03-12 01:10:56]  *** Error codes and diagnostics ***
[2026-03-12 01:10:56]     "exeErrorCode": 0,
[2026-03-12 01:10:56]     "exeErrorDiag": "",
[2026-03-12 01:10:56]     "pilotErrorCode": 0,
[2026-03-12 01:10:56]     "pilotErrorDiag": "",
[2026-03-12 01:10:56]  *** Listing of results directory ***
[2026-03-12 01:10:56] total 617800
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc      5111 Mar 11 07:11 queuedata.json
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc    585013 Mar 11 07:11 pilot3.tar.gz
[2026-03-12 01:10:56] -rwx------. 1 boinc boinc     36322 Mar 11 07:11 runpilot2-wrapper.sh
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc       100 Mar 11 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 01:10:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar 11 21:07 run_atlas
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc       105 Mar 11 21:07 job.xml
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc      6391 Mar 11 21:07 init_data.xml
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc 436965462 Mar 11 21:07 EVNT.46701403._000160.pool.root.1
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc     15845 Mar 11 21:07 start_atlas.sh
[2026-03-12 01:10:56] drwxrwx--x. 2 boinc boinc        68 Mar 11 21:07 shared
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc    597531 Mar 11 21:07 input.tar.gz
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc         0 Mar 11 21:07 boinc_lockfile
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc      2558 Mar 11 21:08 pandaJob.out
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc       415 Mar 11 21:14 workernode_map.json
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc   1006235 Mar 11 21:14 agis_schedconf.cvmfs.json
[2026-03-12 01:10:56] drwx------. 5 boinc boinc      4096 Mar 11 21:14 pilot3
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc 186903100 Mar 12 01:08 HITS.48955006._043744.pool.root.1
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc       532 Mar 12 01:08 boinc_task_state.xml
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc      1018 Mar 12 01:09 memory_monitor_summary.json
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc   1511578 Mar 12 01:09 agis_ddmendpoints.agis.ALL.json
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc    442859 Mar 12 01:09 log.48955006._043744.job.log.tgz.1
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc      6320 Mar 12 01:09 heartbeat.json
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc        95 Mar 12 01:10 pilot_heartbeat.json
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc        28 Mar 12 01:10 wrapper_checkpoint.txt
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc      8192 Mar 12 01:10 boinc_mmap_file
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc      4880 Mar 12 01:10 pilotlog.txt
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc   1972286 Mar 12 01:10 log.48955006._043744.job.log.1
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc       357 Mar 12 01:10 output.list
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc       620 Mar 12 01:10 runtime_log
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc   2437120 Mar 12 01:10 result.tar.gz
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc      8816 Mar 12 01:10 runtime_log.err
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc       656 Mar 12 01:10 jGsMDm5xRK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmXrfLDmYbV4Im.diag
[2026-03-12 01:10:56] -rw-r--r--. 1 boinc boinc     20918 Mar 12 01:10 stderr.txt
[2026-03-12 01:10:56] HITS file was successfully produced:
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc 186903100 Mar 12 01:08 shared/HITS.pool.root.1
[2026-03-12 01:10:56]  *** Contents of shared directory: ***
[2026-03-12 01:10:56] total 612232
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc 436965462 Mar 11 21:07 ATLAS.root_0
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc     15845 Mar 11 21:07 start_atlas.sh
[2026-03-12 01:10:56] -rw-r--r--. 2 boinc boinc    597531 Mar 11 21:07 input.tar.gz
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc 186903100 Mar 12 01:08 HITS.pool.root.1
[2026-03-12 01:10:56] -rw-------. 1 boinc boinc   2437120 Mar 12 01:10 result.tar.gz
01:10:58 (14551): run_atlas exited; CPU time 53207.154128
01:10:58 (14551): called boinc_finish(0)

</stderr_txt>
]]>

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