Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:25:18 (582820): wrapper (7.7.26015): starting
05:25:18 (582820): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 05:25:18] Arguments: --nthreads 8
[2026-03-11 05:25:18] Threads: 8
[2026-03-11 05:25:18] Checking for CVMFS
[2026-03-11 05:25:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 05:25:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 05:25:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 05:25:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 05:25:18] 2.13.3.0 11502 181021 267204 157149 0 366 27815877 32935937 42134 16776704 0 1032550678 99.566 1194301634 37046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-11 05:25:18] CVMFS is ok
[2026-03-11 05:25:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 05:25:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 05:25:18] Further information can be found at the LHC@home message board.
[2026-03-11 05:25:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 05:25:18] Checking for apptainer binary...
[2026-03-11 05:25:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 05:25:18] Running /usr/bin/apptainer --version
[2026-03-11 05:25:18] apptainer version 1.4.5-2.el9
[2026-03-11 05:25:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 05:25:19] c7-2-15.aglt2.org
[2026-03-11 05:25:19] apptainer works
[2026-03-11 05:25:19] Set ATHENA_PROC_NUMBER=8
[2026-03-11 05:25:19] Set ATHENA_CORE_NUMBER=8
[2026-03-11 05:25:19] Starting ATLAS job with PandaID=7036183943
[2026-03-11 05:25:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 09:35:29]  *** The last 200 lines of the pilot log: ***
[2026-03-11 09:35:29] 2026-03-11 13:34:46,661 | INFO     | preparing for final server update for job 7036183943 in state='finished'
[2026-03-11 09:35:29] 2026-03-11 13:34:46,661 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7036183943/jobReport.json
[2026-03-11 09:35:29] 2026-03-11 13:34:46,664 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-11 09:35:29] 2026-03-11 13:34:46,664 | INFO     | this job has now completed (state=finished)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,664 | INFO     | log transfer has been attempted: DONE
[2026-03-11 09:35:29] 2026-03-11 13:34:46,664 | INFO     | job 7036183943 has finished - writing final server update
[2026-03-11 09:35:29] 2026-03-11 13:34:46,669 | INFO     | total number of processed events: 400 (read)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,812 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7036183943/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,813 | INFO     | extracted standard info from prmon json
[2026-03-11 09:35:29] 2026-03-11 13:34:46,813 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 09:35:29] 2026-03-11 13:34:46,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 09:35:29] 2026-03-11 13:34:46,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 09:35:29] 2026-03-11 13:34:46,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 09:35:29] 2026-03-11 13:34:46,827 | INFO     | fitting pss+swap vs Time
[2026-03-11 09:35:29] 2026-03-11 13:34:46,827 | INFO     | sum of square deviations: 4504449474.995878
[2026-03-11 09:35:29] 2026-03-11 13:34:46,833 | INFO     | sum of deviations: -59019613278.27047
[2026-03-11 09:35:29] 2026-03-11 13:34:46,833 | INFO     | mean x: 1773228601.5040984
[2026-03-11 09:35:29] 2026-03-11 13:34:46,833 | INFO     | mean y: 2594744.270491803
[2026-03-11 09:35:29] 2026-03-11 13:34:46,833 | INFO     | intersect: 23236347702.468792
[2026-03-11 09:35:29] 2026-03-11 13:34:46,833 | INFO     | chi2: 1.8613978473967685
[2026-03-11 09:35:29] 2026-03-11 13:34:46,834 | INFO     | sum of square deviations: 4233170274.995816
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | sum of deviations: -57412825810.380806
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | mean x: 1773228449.004184
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | mean y: 2595649.380753138
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | intersect: 24052196646.068645
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | chi2: 1.8563599551929733
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | current chi2=1.8563599551929733 (change=0.2706510169677546 %)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,835 | INFO     | right removable region: 238
[2026-03-11 09:35:29] 2026-03-11 13:34:46,836 | INFO     | sum of square deviations: 4233169664.995816
[2026-03-11 09:35:29] 2026-03-11 13:34:46,837 | INFO     | sum of deviations: -94660056863.66112
[2026-03-11 09:35:29] 2026-03-11 13:34:46,837 | INFO     | mean x: 1773228754.004184
[2026-03-11 09:35:29] 2026-03-11 13:34:46,837 | INFO     | mean y: 2614567.661087866
[2026-03-11 09:35:29] 2026-03-11 13:34:46,837 | INFO     | intersect: 39654683341.16273
[2026-03-11 09:35:29] 2026-03-11 13:34:46,837 | INFO     | chi2: 0.4169054237794531
[2026-03-11 09:35:29] 2026-03-11 13:34:46,838 | INFO     | current chi2=0.4169054237794531 (change=77.60256226993545 %)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,838 | INFO     | sum of square deviations: 3973006342.49573
[2026-03-11 09:35:29] 2026-03-11 13:34:46,839 | INFO     | sum of deviations: -87366617360.25636
[2026-03-11 09:35:29] 2026-03-11 13:34:46,839 | INFO     | mean x: 1773228906.5042734
[2026-03-11 09:35:29] 2026-03-11 13:34:46,839 | INFO     | mean y: 2610265.7564102565
[2026-03-11 09:35:29] 2026-03-11 13:34:46,839 | INFO     | intersect: 38996006704.53171
[2026-03-11 09:35:29] 2026-03-11 13:34:46,839 | INFO     | chi2: 0.4043399590042601
[2026-03-11 09:35:29] 2026-03-11 13:34:46,840 | INFO     | current chi2=0.4043399590042601 (change=3.0139844814876384 %)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,840 | INFO     | left removable region: 20
[2026-03-11 09:35:29] 2026-03-11 13:34:46,840 | INFO     | sum of square deviations: 3212478350.4954004
[2026-03-11 09:35:29] 2026-03-11 13:34:46,841 | INFO     | sum of deviations: -63586933008.1468
[2026-03-11 09:35:29] 2026-03-11 13:34:46,841 | INFO     | mean x: 1773229028.5045872
[2026-03-11 09:35:29] 2026-03-11 13:34:46,841 | INFO     | mean y: 2597820.646788991
[2026-03-11 09:35:29] 2026-03-11 13:34:46,841 | INFO     | intersect: 35101416595.94981
[2026-03-11 09:35:29] 2026-03-11 13:34:46,841 | INFO     | chi2: 0.3608613385363805
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | current memory leak: -19.79 B/s (using 218 data points, chi2=0.36)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | could have reported an average CPU frequency of 3258 MHz (12 samples)
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | ..............................
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . Timing measurements:
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . get job = 0 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . initial setup = 15 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . payload setup = 13 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . stage-in = 0 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,842 | INFO     | . payload execution = 14889 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,843 | INFO     | . stage-out = 5 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,843 | INFO     | . log creation = 0 s
[2026-03-11 09:35:29] 2026-03-11 13:34:46,843 | INFO     | ..............................
[2026-03-11 09:35:29] 2026-03-11 13:34:47,180 | INFO     | 
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | job summary report
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | --------------------------------------------------
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | PanDA job id: 7036183943
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | task id: 48838577
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | errors: (none)
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | pilot state: finished 
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | transexitcode: 0
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | exeerrorcode: 0
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | exeerrordiag: 
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | exitcode: 0
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | exitmsg: OK
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | cpuconsumptiontime: 38035 s
[2026-03-11 09:35:29] 2026-03-11 13:34:47,181 | INFO     | nevents: 400
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | neventsw: 0
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | pid: 599140
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | pgrp: 599140
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | corecount: 8
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | event service: False
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | sizes: {0: 2280240, 11: 2280240, 14908: 2311242, 14909: 2311241, 14915: 2320295, 14917: 2320351, 14920: 2320673}
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | --------------------------------------------------
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | 
[2026-03-11 09:35:29] 2026-03-11 13:34:47,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-11 09:35:29] 2026-03-11 13:34:47,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,373 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 09:35:29] 2026-03-11 13:34:47,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 09:35:29] 2026-03-11 13:34:47,374 | INFO     | job 7036183943 has completed (purged errors)
[2026-03-11 09:35:29] 2026-03-11 13:34:47,374 | INFO     | overall cleanup function is called
[2026-03-11 09:35:29] 2026-03-11 13:34:48,473 | INFO     | --- collectZombieJob: --- 10, [599140]
[2026-03-11 09:35:29] 2026-03-11 13:34:48,474 | INFO     | zombie collector waiting for pid 599140
[2026-03-11 09:35:29] 2026-03-11 13:34:48,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 09:35:29] 2026-03-11 13:34:48,474 | INFO     | collected zombie processes
[2026-03-11 09:35:29] 2026-03-11 13:34:48,474 | INFO     | will attempt to kill all subprocesses of pid=599140
[2026-03-11 09:35:29] 2026-03-11 13:34:49,197 | INFO     | number of running child processes to parent process 599140: 1
[2026-03-11 09:35:29] 2026-03-11 13:34:49,197 | INFO     | maximum number of monitored processes: 6
[2026-03-11 09:35:29] 2026-03-11 13:34:49,197 | INFO     | aborting job monitoring since job object (job id=7036183943) has expired
[2026-03-11 09:35:29] 2026-03-11 13:34:50,792 | INFO     | process IDs to be killed: [599140] (in reverse order)
[2026-03-11 09:35:29] 2026-03-11 13:34:51,109 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 09:35:29] 2026-03-11 13:34:51,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 09:35:29] 2026-03-11 13:34:51,215 | INFO     | did not find any defunct processes belonging to 599140
[2026-03-11 09:35:29] 2026-03-11 13:34:51,396 | INFO     | did not find any defunct processes belonging to 599140
[2026-03-11 09:35:29] 2026-03-11 13:34:51,396 | INFO     | ready for new job
[2026-03-11 09:35:29] 2026-03-11 13:34:51,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 09:35:29] 2026-03-11 13:34:51,399 | INFO     | **************************************
[2026-03-11 09:35:29] 2026-03-11 13:34:51,399 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 09:35:29] 2026-03-11 13:34:51,399 | INFO     | **************************************
[2026-03-11 09:35:29] 2026-03-11 13:34:51,400 | INFO     | 
[2026-03-11 09:35:29] 2026-03-11 13:34:51,424 | INFO     | architecture information:
[2026-03-11 09:35:29] 2026-03-11 13:34:51,442 | INFO     | executing command: cat /etc/os-release
[2026-03-11 09:35:29] 2026-03-11 13:34:51,551 | INFO     | cat /etc/os-release:
[2026-03-11 09:35:29] NAME="CentOS Linux"
[2026-03-11 09:35:29] VERSION="7 (Core)"
[2026-03-11 09:35:29] ID="centos"
[2026-03-11 09:35:29] ID_LIKE="rhel fedora"
[2026-03-11 09:35:29] VERSION_ID="7"
[2026-03-11 09:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 09:35:29] ANSI_COLOR="0;31"
[2026-03-11 09:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 09:35:29] HOME_URL="https://www.centos.org/"
[2026-03-11 09:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 09:35:29] 
[2026-03-11 09:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 09:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 09:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 09:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 09:35:29] 
[2026-03-11 09:35:29] 2026-03-11 13:34:51,551 | INFO     | **************************************
[2026-03-11 09:35:29] 2026-03-11 13:34:52,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-11 09:35:29] 2026-03-11 13:34:52,141 | INFO     | sufficient remaining disk space (74200383488 B)
[2026-03-11 09:35:29] 2026-03-11 13:34:52,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 09:35:29] 2026-03-11 13:34:52,141 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 09:35:29] 2026-03-11 13:34:52,141 | INFO     | update_server=False
[2026-03-11 09:35:29] 2026-03-11 13:34:52,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 09:35:29] 2026-03-11 13:34:52,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 09:35:29] 2026-03-11 13:34:52,402 | INFO     | all job control threads have been joined
[2026-03-11 09:35:29] 2026-03-11 13:34:52,521 | INFO     | all payload control threads have been joined
[2026-03-11 09:35:29] 2026-03-11 13:34:52,684 | INFO     | all data control threads have been joined
[2026-03-11 09:35:29] 2026-03-11 13:34:52,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 09:35:29] 2026-03-11 13:34:52,733 | INFO     | aborting loop
[2026-03-11 09:35:29] 2026-03-11 13:34:53,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 09:35:29] 2026-03-11 13:34:53,161 | INFO     | [job] retrieve thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,221 | INFO     | [payload] validate_post thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,282 | INFO     | [job] queue monitor thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,303 | INFO     | [data] copytool_in thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,409 | INFO     | [job] control thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,503 | INFO     | [payload] failed_post thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,528 | INFO     | [payload] control thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,695 | INFO     | [data] control thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,750 | INFO     | [job] job monitor thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:53,973 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:54,180 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:54,236 | INFO     | [job] validate thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:54,348 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:54,514 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:54,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 09:35:29] 2026-03-11 13:34:55,097 | INFO     | [data] copytool_out thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:34:58,616 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 09:35:29] 2026-03-11 13:35:20,718 | INFO     | [monitor] cgroup control has ended
[2026-03-11 09:35:29] 2026-03-11 13:35:21,210 | INFO     | PID=588176 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 09:35:29] 2026-03-11 13:35:21,210 | INFO     | .. there are 59 such processes running
[2026-03-11 09:35:29] 2026-03-11 13:35:21,218 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 09:35:29] 2026-03-11 13:35:21,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 09:35:29] 2026-03-11 13:35:21,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 09:35:29] 2026-03-11 13:35:22,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068902774592)>', '<ExcThread(monitor, started 140068628219648)>']
[2026-03-11 09:35:29] 2026-03-11 13:35:23,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 09:35:29] 2026-03-11 13:35:23,237 | INFO     | [monitor] control thread has ended
[2026-03-11 09:35:29] 2026-03-11 13:35:27,528 | INFO     | all workflow threads have been joined
[2026-03-11 09:35:29] 2026-03-11 13:35:27,529 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 09:35:29] 2026-03-11 13:35:27,529 | INFO     | traces error code: 0
[2026-03-11 09:35:29] 2026-03-11 13:35:27,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 09:35:29] 2026-03-11 13:35:27,803 [wrapper] ==== pilot stdout END ====
[2026-03-11 09:35:29] 2026-03-11 13:35:27,821 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 09:35:29] 2026-03-11 13:35:27,852 [wrapper] pilotpid: 588176
[2026-03-11 09:35:29] 2026-03-11 13:35:27,877 [wrapper] Pilot exit status: 0
[2026-03-11 09:35:29] 2026-03-11 13:35:28,072 [wrapper] pandaids: 7036183943
[2026-03-11 09:35:29] 2026-03-11 13:35:28,352 [wrapper] cleanup supervisor_pilot 1814174 588177
[2026-03-11 09:35:29] 2026-03-11 13:35:28,365 [wrapper] Test setup, not cleaning
[2026-03-11 09:35:29] 2026-03-11 13:35:28,377 [wrapper] apfmon messages muted
[2026-03-11 09:35:29] 2026-03-11 13:35:28,404 [wrapper] ==== wrapper stdout END ====
[2026-03-11 09:35:29] 2026-03-11 13:35:28,440 [wrapper] ==== wrapper stderr END ====
[2026-03-11 09:35:29]  *** Error codes and diagnostics ***
[2026-03-11 09:35:29]     "exeErrorCode": 0,
[2026-03-11 09:35:29]     "exeErrorDiag": "",
[2026-03-11 09:35:29]     "pilotErrorCode": 0,
[2026-03-11 09:35:29]     "pilotErrorDiag": "",
[2026-03-11 09:35:29]  *** Listing of results directory ***
[2026-03-11 09:35:29] total 513324
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 22:05 pilot3.tar.gz
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 22:05 queuedata.json
[2026-03-11 09:35:29] -rwx------. 1 boincer umatlas     36322 Mar  2 22:05 runpilot2-wrapper.sh
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas       100 Mar 11 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 09:35:29] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 05:25 run_atlas
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas       105 Mar 11 05:25 job.xml
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas 292901828 Mar 11 05:25 EVNT.48220197._000102.pool.root.1
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 05:25 start_atlas.sh
[2026-03-11 09:35:29] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 05:25 shared
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas    597979 Mar 11 05:25 input.tar.gz
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas         0 Mar 11 05:25 boinc_lockfile
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas      2567 Mar 11 05:25 pandaJob.out
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas        57 Mar 11 05:25 setup.sh.local
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas   1006978 Mar 11 05:25 agis_schedconf.cvmfs.json
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas       428 Mar 11 05:25 workernode_map.json
[2026-03-11 09:35:29] drwx------. 5 boincer umatlas      4096 Mar 11 05:25 pilot3
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas      6946 Mar 11 09:30 init_data.xml
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas 224139581 Mar 11 09:33 HITS.48838577._002663.pool.root.1
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas       530 Mar 11 09:33 boinc_task_state.xml
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas      1044 Mar 11 09:34 memory_monitor_summary.json
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas   1511578 Mar 11 09:34 agis_ddmendpoints.agis.ALL.json
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas    450382 Mar 11 09:34 log.48838577._002663.job.log.tgz.1
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas      6348 Mar 11 09:34 heartbeat.json
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas        95 Mar 11 09:35 pilot_heartbeat.json
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas      4819 Mar 11 09:35 pilotlog.txt
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 09:35 boinc_mmap_file
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas        28 Mar 11 09:35 wrapper_checkpoint.txt
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas   1880299 Mar 11 09:35 log.48838577._002663.job.log.1
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas       357 Mar 11 09:35 output.list
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas       620 Mar 11 09:35 runtime_log
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas   2344960 Mar 11 09:35 result.tar.gz
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas      9337 Mar 11 09:35 runtime_log.err
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas       659 Mar 11 09:35 rreNDmEGVH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGODLDmPECIhm.diag
[2026-03-11 09:35:29] -rw-r--r--. 1 boincer umatlas     21345 Mar 11 09:35 stderr.txt
[2026-03-11 09:35:29] HITS file was successfully produced:
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas 224139581 Mar 11 09:33 shared/HITS.pool.root.1
[2026-03-11 09:35:29]  *** Contents of shared directory: ***
[2026-03-11 09:35:29] total 507828
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas 292901828 Mar 11 05:25 ATLAS.root_0
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 05:25 start_atlas.sh
[2026-03-11 09:35:29] -rw-r--r--. 2 boincer umatlas    597979 Mar 11 05:25 input.tar.gz
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas 224139581 Mar 11 09:33 HITS.pool.root.1
[2026-03-11 09:35:29] -rw-------. 1 boincer umatlas   2344960 Mar 11 09:35 result.tar.gz
09:35:31 (582820): run_atlas exited; CPU time 38821.780816
09:35:31 (582820): called boinc_finish(0)

</stderr_txt>
]]>

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