Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-11 18:24:53 (11828): vboxwrapper version 26210
2026-03-11 18:24:53 (11828): BOINC client version: 7.24.1
2026-03-11 18:24:54 (11828): Detected: VirtualBox VboxManage Interface (Version: 7.1.14)
2026-03-11 18:24:54 (11828): Successfully copied 'init_data.xml' to the shared directory.
2026-03-11 18:24:54 (11828): Create VM. (boinc_3d846fd433d8bbbc, slot#2)
2026-03-11 18:24:54 (11828): Setting Memory Size for VM. (4600MB)
2026-03-11 18:24:54 (11828): Setting CPU Count for VM. (6)
2026-03-11 18:24:54 (11828): Setting Chipset Options for VM.
2026-03-11 18:24:54 (11828): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-11 18:24:54 (11828): Setting Boot Options for VM.
2026-03-11 18:24:54 (11828): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-11 18:24:54 (11828): Enabling VM Network Access.
2026-03-11 18:24:54 (11828): Disabling USB Support for VM.
2026-03-11 18:24:54 (11828): Disabling COM Port Support for VM.
2026-03-11 18:24:54 (11828): Disabling LPT Port Support for VM.
2026-03-11 18:24:54 (11828): Disabling Audio Support for VM.
2026-03-11 18:24:54 (11828): Disabling Clipboard Support for VM.
2026-03-11 18:24:54 (11828): Disabling Drag and Drop Support for VM.
2026-03-11 18:24:54 (11828): Adding storage controller(s) to VM.
2026-03-11 18:24:54 (11828): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-11 18:24:54 (11828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-11 18:24:54 (11828): forwarding host port 52433 to guest port 80
2026-03-11 18:24:55 (11828): Enabling remote desktop for VM.
2026-03-11 18:24:55 (11828): Required extension pack not installed, remote desktop not enabled.
2026-03-11 18:24:55 (11828): Enabling shared directory for VM.
2026-03-11 18:24:55 (11828): Starting VM using VBoxManage interface. (boinc_3d846fd433d8bbbc, slot#2)
2026-03-11 18:24:56 (11828): Successfully started VM. (PID = '12090')
2026-03-11 18:24:56 (11828): Reporting VM Process ID to BOINC.
2026-03-11 18:24:56 (11828): Guest Log: BIOS: VirtualBox 7.1.14
2026-03-11 18:24:56 (11828): Guest Log: CPUID EDX: 0x178bfbff
2026-03-11 18:24:56 (11828): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-11 18:24:56 (11828): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-11 18:24:56 (11828): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-11 18:24:56 (11828): Detected: Web Application Enabled (http://localhost:52433)
2026-03-11 18:24:56 (11828): Preference change detected
2026-03-11 18:24:56 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 18:24:56 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 18:24:58 (11828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-11 18:24:58 (11828): Guest Log: BIOS: Booting from Hard Disk...
2026-03-11 18:25:01 (11828): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-11 18:25:01 (11828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-11 18:25:01 (11828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-11 18:25:08 (11828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-11 18:25:08 (11828): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-11 18:25:15 (11828): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000237 main     Log opened 2026-03-11T17:25:13.361796000Z
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000485 main     OS Product: Linux
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000549 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000600 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000652 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000653 main     Process ID: 1338
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.000654 main     Package type: LINUX_64BITS_GENERIC
2026-03-11 18:25:15 (11828): Guest Log: 00:00:00.002345 main     5.2.32 r132073 started. Verbose level = 0
2026-03-11 18:25:15 (11828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-11 18:25:15 (11828): Guest Log: [INFO] Mounting shared directory
2026-03-11 18:25:15 (11828): Guest Log: [INFO] Checking for init_data.xml
2026-03-11 18:25:19 (11828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-11 18:25:19 (11828): Guest Log: [INFO] Detected branch: prod
2026-03-11 18:25:19 (11828): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-11 18:25:19 (11828): Guest Log: Copying input files
2026-03-11 18:25:21 (11828): Guest Log: Copied input files into RunAtlas.
2026-03-11 18:25:21 (11828): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-11 18:25:21 (11828): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-11 18:25:21 (11828): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-11 18:25:21 (11828): Guest Log: Further information can be found at the LHC@home message board.
2026-03-11 18:26:26 (11828): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-11 18:26:26 (11828): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-11 18:26:26 (11828): Guest Log: 2.6.3.0 1614 1 32208 157163 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-11 18:26:27 (11828): Guest Log: copied the webapp to /var/www
2026-03-11 18:26:27 (11828): Guest Log: ATHENA_PROC_NUMBER=6
2026-03-11 18:26:27 (11828): Guest Log: ATHENA_CORE_NUMBER=6
2026-03-11 18:26:27 (11828): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-11 18:26:27 (11828): Guest Log:  *** Starting ATLAS job. (PandaID=7036179417 taskID=48700890) ***
2026-03-11 19:38:42 (11828): Preference change detected
2026-03-11 19:38:42 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 19:38:42 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 19:38:53 (11828): Preference change detected
2026-03-11 19:38:53 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 19:38:53 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 19:39:16 (11828): Preference change detected
2026-03-11 19:39:16 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 19:39:16 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 19:39:20 (11828): Preference change detected
2026-03-11 19:39:20 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 19:39:20 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 19:39:29 (11828): VM state change detected. (old = 'running', new = 'paused')
2026-03-11 19:40:16 (11828): Preference change detected
2026-03-11 19:40:16 (11828): Setting CPU throttle for VM. (100%)
2026-03-11 19:40:17 (11828): Setting checkpoint interval to 3600 seconds. (Higher value of (Preference: 3600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-11 19:40:17 (11828): VM state change detected. (old = 'paused', new = 'running')
2026-03-11 20:04:46 (11828): Status Report: Elapsed Time: '6000.000000'
2026-03-11 20:04:46 (11828): Status Report: CPU Time: '32052.310000'
2026-03-11 20:47:43 (11828): Guest Log:  *** Job finished ***
2026-03-11 20:47:43 (11828): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:15,957 | INFO     | [job] control thread has finished
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:17,249 | INFO     | [data] queue_monitor thread has finished
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:35,460 | INFO     | [monitor] cgroup control has ended
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:37,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140078700971840)>', '<ExcThread(monitor, started 140077741111040)>']
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:37,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:37,946 | INFO     | [monitor] control thread has ended
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,594 | INFO     | all workflow threads have been joined
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,594 | INFO     | end of generic workflow (traces error code: 0)
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,595 | INFO     | traces error code: 0
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,741 [wrapper] ==== pilot stdout END ====
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,750 [wrapper] ==== wrapper stdout RESUME ====
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,759 [wrapper] pilotpid: 6061
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,767 [wrapper] Pilot exit status: 0
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,862 [wrapper] pandaids: 7036179417
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,917 [wrapper] cleanup supervisor_pilot 26571 6062
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,926 [wrapper] Test setup, not cleaning
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,937 [wrapper] apfmon messages muted
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,946 [wrapper] ==== wrapper stdout END ====
2026-03-11 20:47:43 (11828): Guest Log: 2026-03-11 19:47:42,955 [wrapper] ==== wrapper stderr END ====
2026-03-11 20:47:43 (11828): Guest Log:  *** Error codes and diagnostics ***
2026-03-11 20:47:43 (11828): Guest Log:     "exeErrorCode": 0,
2026-03-11 20:47:43 (11828): Guest Log:     "exeErrorDiag": "",
2026-03-11 20:47:43 (11828): Guest Log:     "pilotErrorCode": 0,
2026-03-11 20:47:43 (11828): Guest Log:     "pilotErrorDiag": "",
2026-03-11 20:47:43 (11828): Guest Log:  *** Listing of results directory ***
2026-03-11 20:47:43 (11828): Guest Log: total 154824
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  3 03:05 pilot3.tar.gz
2026-03-11 20:47:43 (11828): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  3 03:05 runpilot2-wrapper.sh
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  3 03:05 queuedata.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas    597926 Mar 11 17:25 input.tar.gz
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 11 17:25 start_atlas.sh
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas      9239 Mar 11 17:25 init_data.xml
2026-03-11 20:47:43 (11828): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 11 17:25 EVNT.48700888._000071.pool.root.1 -> /data/./ATLAS.root_0
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas      2510 Mar 11 17:26 pandaJob.out
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas   1006243 Mar 11 17:28 agis_schedconf.cvmfs.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 11 17:28 agis_ddmendpoints.agis.ALL.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas       423 Mar 11 17:28 workernode_map.json
2026-03-11 20:47:43 (11828): Guest Log: drwx------. 5 atlas atlas      4096 Mar 11 17:28 pilot3
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas        95 Mar 11 19:46 pilot_heartbeat.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas 151675638 Mar 11 19:46 HITS.48700890._001703.pool.root.1
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas      1034 Mar 11 19:47 memory_monitor_summary.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas    333887 Mar 11 19:47 log.48700890._001703.job.log.tgz.1
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas      6334 Mar 11 19:47 heartbeat.json
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas      4608 Mar 11 19:47 pilotlog.txt
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas   1165073 Mar 11 19:47 log.48700890._001703.job.log.1
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas       357 Mar 11 19:47 output.list
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 11 19:47 runtime_log
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas   1515520 Mar 11 19:47 result.tar.gz
2026-03-11 20:47:43 (11828): Guest Log: -rw-r--r--. 1 atlas atlas      8735 Mar 11 19:47 runtime_log.err
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas       653 Mar 11 19:47 JaxLDmpFVH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZMFLDmBvjtqn.diag
2026-03-11 20:47:43 (11828): Guest Log: Looking for outputfile HITS.48700890._001703.pool.root.1
2026-03-11 20:47:43 (11828): Guest Log: HITS file was successfully produced
2026-03-11 20:47:43 (11828): Guest Log: -rw-------. 1 atlas atlas 151675638 Mar 11 19:46 /home/atlas/RunAtlas/HITS.48700890._001703.pool.root.1
2026-03-11 20:47:44 (11828): Guest Log: Successfully finished the ATLAS job!
2026-03-11 20:47:44 (11828): Guest Log: Copying the results back to the shared directory!
2026-03-11 20:47:44 (11828): Guest Log:  *** Contents of shared directory: ***
2026-03-11 20:47:44 (11828): Guest Log: total 189260
2026-03-11 20:47:44 (11828): Guest Log: -rw-r--r--. 1 root root 191659399 Mar 11 17:24 ATLAS.root_0
2026-03-11 20:47:44 (11828): Guest Log: -rw-r--r--. 1 root root      9239 Mar 11 17:24 init_data.xml
2026-03-11 20:47:44 (11828): Guest Log: -rw-r--r--. 1 root root    597926 Mar 11 17:24 input.tar.gz
2026-03-11 20:47:44 (11828): Guest Log: -rw-r--r--. 1 root root   1515520 Mar 11 19:47 result.tar.gz
2026-03-11 20:47:44 (11828): Guest Log: -rw-r--r--. 1 root root     15845 Mar 11 17:24 start_atlas.sh
2026-03-11 20:47:44 (11828): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-11 20:47:44 (11828): VM Completion File Detected.
2026-03-11 20:47:44 (11828): Powering off VM.
2026-03-11 20:47:44 (11828): Successfully stopped VM.
2026-03-11 20:47:44 (11828): Deregistering VM. (boinc_3d846fd433d8bbbc, slot#2)
2026-03-11 20:47:45 (11828): Removing network bandwidth throttle group from VM.
2026-03-11 20:47:45 (11828): Removing VM from VirtualBox.
2026-03-11 20:47:50 (11828): called boinc_finish(0)

</stderr_txt>
]]>

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