Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:38:47 (2375933): wrapper (7.7.26015): starting
04:38:47 (2375933): wrapper: running run_atlas (--nthreads 4)
[2026-03-18 04:38:47] Arguments: --nthreads 4
[2026-03-18 04:38:47] Threads: 4
[2026-03-18 04:38:47] Checking for CVMFS
[2026-03-18 04:38:47] No cvmfs_config command found, will try listing directly
[2026-03-18 04:38:47] CVMFS is ok
[2026-03-18 04:38:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-18 04:38:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-18 04:38:47] Further information can be found at the LHC@home message board.
[2026-03-18 04:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-18 04:38:47] Checking for apptainer binary...
[2026-03-18 04:38:47] which: no apptainer in ((null))
[2026-03-18 04:38:47] apptainer is not installed, using version from CVMFS
[2026-03-18 04:38:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-18 04:38:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/15/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-18 04:38:48] apptainer works
[2026-03-18 04:38:48] Set ATHENA_PROC_NUMBER=4
[2026-03-18 04:38:48] Set ATHENA_CORE_NUMBER=4
[2026-03-18 04:38:48] Starting ATLAS job with PandaID=7049376440
[2026-03-18 04:38:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-18 06:27:42]  *** The last 200 lines of the pilot log: ***
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | sum of deviations: -3519451181.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | mean x: 1773808688.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | mean y: 2347694.252631579
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | intersect: 23486809246.756084
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | chi2: 0.012790477731893152
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | current chi2=0.012790477731893152 (change=46.76146904760016 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,477 | INFO     | sum of square deviations: 226022842.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | sum of deviations: -1979177573.9999998
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | mean x: 1773808840.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | mean y: 2341784.2
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | intersect: 15534766024.376268
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | chi2: 0.007409634780729256
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | current chi2=0.007409634780729256 (change=42.06913192731436 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | sum of square deviations: 190403570.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | sum of deviations: -918642493.0000001
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | mean x: 1773808993.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | mean y: 2337251.7411764706
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | intersect: 8560455754.6418295
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | chi2: 0.004022765254235578
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | current chi2=0.004022765254235578 (change=45.70899412346397 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,478 | INFO     | sum of square deviations: 158737860.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | sum of deviations: -235727973.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean x: 1773809145.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean y: 2333976.625
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | intersect: 2636465710.2742825
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | chi2: 0.002054571622320459
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | current chi2=0.002054571622320459 (change=48.92638539727875 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | sum of square deviations: 130793150.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | sum of deviations: 200409094.99999994
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean x: 1773809298.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean y: 2331606.24
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | intersect: -2715605197.902765
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | chi2: 0.0008009873101452512
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | current chi2=0.0008009873101452512 (change=61.01438852539947 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | sum of square deviations: 106336877.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | sum of deviations: 343364394.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean x: 1773809450.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | mean y: 2330764.5
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | intersect: -5725343606.31562
[2026-03-18 06:27:42] 2026-03-18 05:26:34,479 | INFO     | chi2: 8.928977718272195e-05
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | current chi2=8.928977718272195e-05 (change=88.85253535832796 %)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | left removable region not found
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | sum of square deviations: 300842850.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | sum of deviations: 2000202627.0000017
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | mean x: 1773808200.0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | mean y: 2331741.585858586
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | intersect: -11791120625.43614
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | chi2: 1.1086246017411792
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | current memory leak: 6.65 B/s (using 99 data points, chi2=1.11)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | could have reported an average CPU frequency of 3545 MHz (7 samples)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | ..............................
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | . Timing measurements:
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | . get job = 0 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | . initial setup = 13 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,480 | INFO     | . payload setup = 21 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,481 | INFO     | . stage-in = 0 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,481 | INFO     | . payload execution = 6393 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,481 | INFO     | . stage-out = 0 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,481 | INFO     | . log creation = 0 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,481 | INFO     | ..............................
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | 
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | job summary report
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | --------------------------------------------------
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | PanDA job id: 7049376440
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | task id: 48967085
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | errors: (none)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | pilot state: finished 
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | transexitcode: 0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | exeerrorcode: 0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | exeerrordiag: 
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | exitcode: 0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | exitmsg: OK
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | cpuconsumptiontime: 23307 s
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | nevents: 400
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | neventsw: 0
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | pid: 2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:34,527 | INFO     | pgrp: 2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | corecount: 4
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | event service: False
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | sizes: {0: 2279817, 1: 2280278, 11: 2280278, 6418: 2307387, 6419: 2316602}
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | --------------------------------------------------
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | 
[2026-03-18 06:27:42] 2026-03-18 05:26:34,528 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/15
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | job 7049376440 has completed (purged errors)
[2026-03-18 06:27:42] 2026-03-18 05:26:34,545 | INFO     | overall cleanup function is called
[2026-03-18 06:27:42] 2026-03-18 05:26:35,552 | INFO     | --- collectZombieJob: --- 10, [2388744]
[2026-03-18 06:27:42] 2026-03-18 05:26:35,552 | INFO     | zombie collector waiting for pid 2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:35,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-18 06:27:42] 2026-03-18 05:26:35,552 | INFO     | collected zombie processes
[2026-03-18 06:27:42] 2026-03-18 05:26:35,552 | INFO     | will attempt to kill all subprocesses of pid=2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:36,031 | INFO     | process IDs to be killed: [2388744] (in reverse order)
[2026-03-18 06:27:42] 2026-03-18 05:26:36,262 | WARNING  | found no corresponding commands to process id(s)
[2026-03-18 06:27:42] 2026-03-18 05:26:36,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-18 06:27:42] 2026-03-18 05:26:36,291 | INFO     | did not find any defunct processes belonging to 2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:36,320 | INFO     | did not find any defunct processes belonging to 2388744
[2026-03-18 06:27:42] 2026-03-18 05:26:36,320 | INFO     | ready for new job
[2026-03-18 06:27:42] 2026-03-18 05:26:36,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-18 06:27:42] 2026-03-18 05:26:36,321 | INFO     | **************************************
[2026-03-18 06:27:42] 2026-03-18 05:26:36,321 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-18 06:27:42] 2026-03-18 05:26:36,321 | INFO     | **************************************
[2026-03-18 06:27:42] 2026-03-18 05:26:36,321 | INFO     | 
[2026-03-18 06:27:42] 2026-03-18 05:26:36,327 | INFO     | architecture information:
[2026-03-18 06:27:42] 2026-03-18 05:26:36,327 | INFO     | executing command: cat /etc/os-release
[2026-03-18 06:27:42] 2026-03-18 05:26:36,342 | INFO     | cat /etc/os-release:
[2026-03-18 06:27:42] NAME="CentOS Linux"
[2026-03-18 06:27:42] VERSION="7 (Core)"
[2026-03-18 06:27:42] ID="centos"
[2026-03-18 06:27:42] ID_LIKE="rhel fedora"
[2026-03-18 06:27:42] VERSION_ID="7"
[2026-03-18 06:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-18 06:27:42] ANSI_COLOR="0;31"
[2026-03-18 06:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-18 06:27:42] HOME_URL="https://www.centos.org/"
[2026-03-18 06:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-18 06:27:42] 
[2026-03-18 06:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-18 06:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-18 06:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-18 06:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-18 06:27:42] 
[2026-03-18 06:27:42] 2026-03-18 05:26:36,343 | INFO     | **************************************
[2026-03-18 06:27:42] 2026-03-18 05:26:36,845 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/15
[2026-03-18 06:27:42] 2026-03-18 05:26:36,863 | INFO     | sufficient remaining disk space (21997027328 B)
[2026-03-18 06:27:42] 2026-03-18 05:26:36,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-18 06:27:42] 2026-03-18 05:26:36,863 | INFO     | current server update state: UPDATING_FINAL
[2026-03-18 06:27:42] 2026-03-18 05:26:36,863 | INFO     | update_server=False
[2026-03-18 06:27:42] 2026-03-18 05:26:36,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-18 06:27:42] 2026-03-18 05:26:36,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-18 06:27:42] 2026-03-18 05:26:36,919 | INFO     | all payload control threads have been joined
[2026-03-18 06:27:42] 2026-03-18 05:26:37,035 | INFO     | all data control threads have been joined
[2026-03-18 06:27:42] 2026-03-18 05:26:37,194 | WARNING  | process 2388744 can no longer be monitored (due to stat problems) - aborting
[2026-03-18 06:27:42] 2026-03-18 05:26:37,222 | INFO     | all job control threads have been joined
[2026-03-18 06:27:42] 2026-03-18 05:26:37,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-18 06:27:42] 2026-03-18 05:26:37,525 | INFO     | using path: /var/lib/boinc/var/slot60/slots/15/memory_monitor_summary.json (trf name=prmon)
[2026-03-18 06:27:42] 2026-03-18 05:26:37,869 | INFO     | [job] retrieve thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:37,925 | INFO     | [payload] control thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:37,926 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:37,999 | INFO     | number of running child processes to parent process 2388744: 1
[2026-03-18 06:27:42] 2026-03-18 05:26:37,999 | INFO     | maximum number of monitored processes: 6
[2026-03-18 06:27:42] 2026-03-18 05:26:37,999 | INFO     | aborting job monitoring since job object (job id=7049376440) has expired
[2026-03-18 06:27:42] 2026-03-18 05:26:37,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:27:42] 2026-03-18 05:26:37,999 | INFO     | will abort loop
[2026-03-18 06:27:42] 2026-03-18 05:26:38,012 | INFO     | [payload] failed_post thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:38,041 | INFO     | [data] control thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:38,063 | INFO     | [payload] validate_post thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:38,211 | INFO     | [payload] validate_pre thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:38,228 | INFO     | [job] control thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:38,648 | INFO     | [job] create_data_payload thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,004 | INFO     | [job] job monitor thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,106 | INFO     | [job] validate thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,308 | INFO     | [payload] execute_payloads thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,365 | INFO     | [data] copytool_in thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,415 | INFO     | [data] copytool_out thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:39,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-18 06:27:42] 2026-03-18 05:26:40,541 | INFO     | [job] queue monitor thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:26:40,870 | INFO     | [data] queue_monitor thread has finished
[2026-03-18 06:27:42] 2026-03-18 05:27:08,121 | INFO     | PID=2381002 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-18 06:27:42] 2026-03-18 05:27:08,121 | INFO     | .. there are 49 such processes running
[2026-03-18 06:27:42] 2026-03-18 05:27:08,121 | INFO     | found 0 job(s) in 20 queues
[2026-03-18 06:27:42] 2026-03-18 05:27:08,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-18 06:27:42] 2026-03-18 05:27:08,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-18 06:27:42] 2026-03-18 05:27:34,940 | INFO     | [monitor] cgroup control has ended
[2026-03-18 06:27:42] 2026-03-18 05:27:36,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23116975646528)>', '<ExcThread(monitor, started 23116725344000)>']
[2026-03-18 06:27:42] 2026-03-18 05:27:37,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-18 06:27:42] 2026-03-18 05:27:37,267 | INFO     | [monitor] control thread has ended
[2026-03-18 06:27:42] 2026-03-18 05:27:41,651 | INFO     | all workflow threads have been joined
[2026-03-18 06:27:42] 2026-03-18 05:27:41,652 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-18 06:27:42] 2026-03-18 05:27:41,652 | INFO     | traces error code: 0
[2026-03-18 06:27:42] 2026-03-18 05:27:41,652 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-18 06:27:42] 2026-03-18 05:27:41,781 [wrapper] ==== pilot stdout END ====
[2026-03-18 06:27:42] 2026-03-18 05:27:41,783 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-18 06:27:42] 2026-03-18 05:27:41,786 [wrapper] pilotpid: 2381002
[2026-03-18 06:27:42] 2026-03-18 05:27:41,788 [wrapper] Pilot exit status: 0
[2026-03-18 06:27:42] 2026-03-18 05:27:41,799 [wrapper] pandaids: 7049376440
[2026-03-18 06:27:42] 2026-03-18 05:27:41,943 [wrapper] cleanup supervisor_pilot 2913409 2381003
[2026-03-18 06:27:42] 2026-03-18 05:27:41,950 [wrapper] Test setup, not cleaning
[2026-03-18 06:27:42] 2026-03-18 05:27:41,955 [wrapper] apfmon messages muted
[2026-03-18 06:27:42] 2026-03-18 05:27:41,957 [wrapper] ==== wrapper stdout END ====
[2026-03-18 06:27:42] 2026-03-18 05:27:41,959 [wrapper] ==== wrapper stderr END ====
[2026-03-18 06:27:42]  *** Error codes and diagnostics ***
[2026-03-18 06:27:42]     "exeErrorCode": 0,
[2026-03-18 06:27:42]     "exeErrorDiag": "",
[2026-03-18 06:27:42]     "pilotErrorCode": 0,
[2026-03-18 06:27:42]     "pilotErrorDiag": "",
[2026-03-18 06:27:42]  *** Listing of results directory ***
[2026-03-18 06:27:42] total 407136
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc      5111 Mar 11 03:46 queuedata.json
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc    585013 Mar 11 03:46 pilot3.tar.gz
[2026-03-18 06:27:42] -rwx------. 1 boinc boinc     36322 Mar 11 03:46 runpilot2-wrapper.sh
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc       100 Mar 18 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-18 06:27:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar 18 04:38 run_atlas
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc       105 Mar 18 04:38 job.xml
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc      6707 Mar 18 04:38 init_data.xml
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc 211734545 Mar 18 04:38 EVNT.48967083._000208.pool.root.1
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc     15845 Mar 18 04:38 start_atlas.sh
[2026-03-18 06:27:42] drwxrwx--x. 2 boinc boinc      4096 Mar 18 04:38 shared
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc    597517 Mar 18 04:38 input.tar.gz
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc         0 Mar 18 04:38 boinc_lockfile
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc      2561 Mar 18 04:38 pandaJob.out
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc   1011515 Mar 18 04:39 agis_schedconf.cvmfs.json
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc   1511579 Mar 18 04:39 agis_ddmendpoints.agis.ALL.json
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc       444 Mar 18 04:39 workernode_map.json
[2026-03-18 06:27:42] drwx------. 5 boinc boinc      4096 Mar 18 04:39 pilot3
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc 198799559 Mar 18 06:26 HITS.48967085._005193.pool.root.1
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc        95 Mar 18 06:26 pilot_heartbeat.json
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc       529 Mar 18 06:26 boinc_task_state.xml
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc      1029 Mar 18 06:26 memory_monitor_summary.json
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc    296922 Mar 18 06:26 log.48967085._005193.job.log.tgz.1
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc      6355 Mar 18 06:26 heartbeat.json
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc      8192 Mar 18 06:27 boinc_mmap_file
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc        27 Mar 18 06:27 wrapper_checkpoint.txt
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc      5363 Mar 18 06:27 pilotlog.txt
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc    919429 Mar 18 06:27 log.48967085._005193.job.log.1
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc       357 Mar 18 06:27 output.list
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc       620 Mar 18 06:27 runtime_log
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc   1228800 Mar 18 06:27 result.tar.gz
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc      9221 Mar 18 06:27 runtime_log.err
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc       662 Mar 18 06:27 TqRKDmnlOK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm6BfLDmfZKK0m.diag
[2026-03-18 06:27:42] -rw-r--r--. 1 boinc boinc     20822 Mar 18 06:27 stderr.txt
[2026-03-18 06:27:42] HITS file was successfully produced:
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc 198799559 Mar 18 06:26 shared/HITS.pool.root.1
[2026-03-18 06:27:42]  *** Contents of shared directory: ***
[2026-03-18 06:27:42] total 402728
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc 211734545 Mar 18 04:38 ATLAS.root_0
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc     15845 Mar 18 04:38 start_atlas.sh
[2026-03-18 06:27:42] -rw-r--r--. 2 boinc boinc    597517 Mar 18 04:38 input.tar.gz
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc 198799559 Mar 18 06:26 HITS.pool.root.1
[2026-03-18 06:27:42] -rw-------. 1 boinc boinc   1228800 Mar 18 06:27 result.tar.gz
06:27:43 (2375933): run_atlas exited; CPU time 23602.455964
06:27:43 (2375933): called boinc_finish(0)

</stderr_txt>
]]>

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