Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:17:29 (34474): wrapper (7.7.26015): starting
01:17:29 (34474): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 01:17:29] Arguments: --nthreads 8
[2026-03-11 01:17:29] Threads: 8
[2026-03-11 01:17:29] Checking for CVMFS
[2026-03-11 01:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 01:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 01:17:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 01:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 01:17:30] 2.11.2.0 27562 484837 314688 157144 3 11 10046865 18432000 2749 130560 7 798299928 99.415 1132804472 25907 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-11 01:17:30] CVMFS is ok
[2026-03-11 01:17:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 01:17:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 01:17:30] Further information can be found at the LHC@home message board.
[2026-03-11 01:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 01:17:30] Checking for apptainer binary...
[2026-03-11 01:17:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 01:17:30] Running /usr/bin/apptainer --version
[2026-03-11 01:17:30] apptainer version 1.3.2-1.el7
[2026-03-11 01:17:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 01:17:31] c-9-30.aglt2.org
[2026-03-11 01:17:31] apptainer works
[2026-03-11 01:17:31] Set ATHENA_PROC_NUMBER=8
[2026-03-11 01:17:31] Set ATHENA_CORE_NUMBER=8
[2026-03-11 01:17:31] Starting ATLAS job with PandaID=7036175442
[2026-03-11 01:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:20:36]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:20:36] 2026-03-11 09:20:04,411 | INFO     | job 7036175442 has state=finished
[2026-03-11 05:20:36] 2026-03-11 09:20:04,412 | INFO     | preparing for final server update for job 7036175442 in state='finished'
[2026-03-11 05:20:36] 2026-03-11 09:20:04,412 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7036175442/jobReport.json
[2026-03-11 05:20:36] 2026-03-11 09:20:04,415 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-11 05:20:36] 2026-03-11 09:20:04,415 | INFO     | this job has now completed (state=finished)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,416 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,416 | INFO     | log transfer has been attempted: DONE
[2026-03-11 05:20:36] 2026-03-11 09:20:04,416 | INFO     | job 7036175442 has finished - writing final server update
[2026-03-11 05:20:36] 2026-03-11 09:20:04,416 | INFO     | total number of processed events: 400 (read)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,423 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7036175442/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,423 | INFO     | extracted standard info from prmon json
[2026-03-11 05:20:36] 2026-03-11 09:20:04,424 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 05:20:36] 2026-03-11 09:20:04,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 05:20:36] 2026-03-11 09:20:04,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 05:20:36] 2026-03-11 09:20:04,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 05:20:36] 2026-03-11 09:20:04,431 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:20:36] 2026-03-11 09:20:04,431 | INFO     | sum of square deviations: 4180243959.5
[2026-03-11 05:20:36] 2026-03-11 09:20:04,433 | INFO     | sum of deviations: -26481846918.000008
[2026-03-11 05:20:36] 2026-03-11 09:20:04,434 | INFO     | mean x: 1773213514.5
[2026-03-11 05:20:36] 2026-03-11 09:20:04,434 | INFO     | mean y: 2510737.462184874
[2026-03-11 05:20:36] 2026-03-11 09:20:04,434 | INFO     | intersect: 11235818960.347445
[2026-03-11 05:20:36] 2026-03-11 09:20:04,435 | INFO     | chi2: 1.5721314809121858
[2026-03-11 05:20:36] 2026-03-11 09:20:04,435 | INFO     | sum of square deviations: 3922276332.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,437 | INFO     | sum of deviations: -25532210874.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,437 | INFO     | mean x: 1773213362.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,437 | INFO     | mean y: 2511299.017167382
[2026-03-11 05:20:36] 2026-03-11 09:20:04,437 | INFO     | intersect: 11545312889.463219
[2026-03-11 05:20:36] 2026-03-11 09:20:04,438 | INFO     | chi2: 1.5708718043495213
[2026-03-11 05:20:36] 2026-03-11 09:20:04,438 | INFO     | current chi2=1.5708718043495213 (change=0.08012539523307335 %)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,438 | INFO     | right removable region: 232
[2026-03-11 05:20:36] 2026-03-11 09:20:04,439 | INFO     | sum of square deviations: 3922276332.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,441 | INFO     | sum of deviations: -59364351734.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,441 | INFO     | mean x: 1773213667.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,441 | INFO     | mean y: 2529972.854077253
[2026-03-11 05:20:36] 2026-03-11 09:20:04,441 | INFO     | intersect: 26840435035.40946
[2026-03-11 05:20:36] 2026-03-11 09:20:04,442 | INFO     | chi2: 0.2250544478100724
[2026-03-11 05:20:36] 2026-03-11 09:20:04,442 | INFO     | current chi2=0.2250544478100724 (change=85.68475661593578 %)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,442 | INFO     | sum of square deviations: 3675146117.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,444 | INFO     | sum of deviations: -61739769295.5
[2026-03-11 05:20:36] 2026-03-11 09:20:04,444 | INFO     | mean x: 1773213819.5
[2026-03-11 05:20:36] 2026-03-11 09:20:04,445 | INFO     | mean y: 2531417.8114035088
[2026-03-11 05:20:36] 2026-03-11 09:20:04,445 | INFO     | intersect: 29791227878.372395
[2026-03-11 05:20:36] 2026-03-11 09:20:04,445 | INFO     | chi2: 0.19292249556861607
[2026-03-11 05:20:36] 2026-03-11 09:20:04,445 | INFO     | current chi2=0.19292249556861607 (change=14.27741266796605 %)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,445 | INFO     | left removable region: 20
[2026-03-11 05:20:36] 2026-03-11 09:20:04,446 | INFO     | sum of square deviations: 2954447953.0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,448 | INFO     | sum of deviations: -46485897442.49999
[2026-03-11 05:20:36] 2026-03-11 09:20:04,448 | INFO     | mean x: 1773213941.5
[2026-03-11 05:20:36] 2026-03-11 09:20:04,448 | INFO     | mean y: 2523419.570754717
[2026-03-11 05:20:36] 2026-03-11 09:20:04,448 | INFO     | intersect: 27902639698.309
[2026-03-11 05:20:36] 2026-03-11 09:20:04,449 | INFO     | chi2: 0.17622839968938767
[2026-03-11 05:20:36] 2026-03-11 09:20:04,449 | INFO     | current memory leak: -15.73 B/s (using 212 data points, chi2=0.18)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,449 | INFO     | could have reported an average CPU frequency of 2999 MHz (12 samples)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | ..............................
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . Timing measurements:
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . get job = 0 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . initial setup = 6 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . payload setup = 4 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . stage-in = 0 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,450 | INFO     | . payload execution = 14511 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,451 | INFO     | . stage-out = 2 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,451 | INFO     | . log creation = 0 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,451 | INFO     | ..............................
[2026-03-11 05:20:36] 2026-03-11 09:20:04,524 | INFO     | 
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | job summary report
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | --------------------------------------------------
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | PanDA job id: 7036175442
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | task id: 48851541
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | errors: (none)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:20:36] 2026-03-11 09:20:04,525 | INFO     | pilot state: finished 
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | transexitcode: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | exeerrorcode: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | exeerrordiag: 
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | exitcode: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | exitmsg: OK
[2026-03-11 05:20:36] 2026-03-11 09:20:04,526 | INFO     | cpuconsumptiontime: 109763 s
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | nevents: 400
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | neventsw: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | pid: 43785
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | pgrp: 43785
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | corecount: 8
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | event service: False
[2026-03-11 05:20:36] 2026-03-11 09:20:04,527 | INFO     | sizes: {0: 2280313, 11: 2280313, 14520: 2311164, 14522: 2320162, 14525: 2320218, 14527: 2320412}
[2026-03-11 05:20:36] 2026-03-11 09:20:04,528 | INFO     | --------------------------------------------------
[2026-03-11 05:20:36] 2026-03-11 09:20:04,528 | INFO     | 
[2026-03-11 05:20:36] 2026-03-11 09:20:04,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-11 05:20:36] 2026-03-11 09:20:04,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:20:36] 2026-03-11 09:20:04,546 | INFO     | job 7036175442 has completed (purged errors)
[2026-03-11 05:20:36] 2026-03-11 09:20:04,546 | INFO     | overall cleanup function is called
[2026-03-11 05:20:36] 2026-03-11 09:20:05,553 | INFO     | --- collectZombieJob: --- 10, [43785]
[2026-03-11 05:20:36] 2026-03-11 09:20:05,553 | INFO     | zombie collector waiting for pid 43785
[2026-03-11 05:20:36] 2026-03-11 09:20:05,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:20:36] 2026-03-11 09:20:05,553 | INFO     | collected zombie processes
[2026-03-11 05:20:36] 2026-03-11 09:20:05,554 | INFO     | will attempt to kill all subprocesses of pid=43785
[2026-03-11 05:20:36] 2026-03-11 09:20:05,754 | INFO     | process IDs to be killed: [43785] (in reverse order)
[2026-03-11 05:20:36] 2026-03-11 09:20:05,801 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:20:36] 2026-03-11 09:20:05,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:20:36] 2026-03-11 09:20:05,805 | INFO     | did not find any defunct processes belonging to 43785
[2026-03-11 05:20:36] 2026-03-11 09:20:05,809 | INFO     | did not find any defunct processes belonging to 43785
[2026-03-11 05:20:36] 2026-03-11 09:20:05,809 | INFO     | ready for new job
[2026-03-11 05:20:36] 2026-03-11 09:20:05,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:20:36] 2026-03-11 09:20:05,811 | INFO     | **************************************
[2026-03-11 05:20:36] 2026-03-11 09:20:05,811 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:20:36] 2026-03-11 09:20:05,811 | INFO     | **************************************
[2026-03-11 05:20:36] 2026-03-11 09:20:05,811 | INFO     | 
[2026-03-11 05:20:36] 2026-03-11 09:20:05,812 | INFO     | architecture information:
[2026-03-11 05:20:36] 2026-03-11 09:20:05,812 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:20:36] 2026-03-11 09:20:05,825 | INFO     | cat /etc/os-release:
[2026-03-11 05:20:36] NAME="CentOS Linux"
[2026-03-11 05:20:36] VERSION="7 (Core)"
[2026-03-11 05:20:36] ID="centos"
[2026-03-11 05:20:36] ID_LIKE="rhel fedora"
[2026-03-11 05:20:36] VERSION_ID="7"
[2026-03-11 05:20:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:20:36] ANSI_COLOR="0;31"
[2026-03-11 05:20:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:20:36] HOME_URL="https://www.centos.org/"
[2026-03-11 05:20:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:20:36] 
[2026-03-11 05:20:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:20:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:20:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:20:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:20:36] 
[2026-03-11 05:20:36] 2026-03-11 09:20:05,825 | INFO     | **************************************
[2026-03-11 05:20:36] 2026-03-11 09:20:06,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-11 05:20:36] 2026-03-11 09:20:06,343 | INFO     | sufficient remaining disk space (104131985408 B)
[2026-03-11 05:20:36] 2026-03-11 09:20:06,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:20:36] 2026-03-11 09:20:06,344 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:20:36] 2026-03-11 09:20:06,344 | INFO     | update_server=False
[2026-03-11 05:20:36] 2026-03-11 09:20:06,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:20:36] 2026-03-11 09:20:06,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:20:36] 2026-03-11 09:20:06,572 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 05:20:36] 2026-03-11 09:20:06,573 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 05:20:36] 2026-03-11 09:20:06,573 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:20:36] 2026-03-11 09:20:06,573 | INFO     | will abort loop
[2026-03-11 05:20:36] 2026-03-11 09:20:06,789 | INFO     | all job control threads have been joined
[2026-03-11 05:20:36] 2026-03-11 09:20:07,083 | INFO     | all data control threads have been joined
[2026-03-11 05:20:36] 2026-03-11 09:20:07,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:20:36] 2026-03-11 09:20:07,333 | INFO     | all payload control threads have been joined
[2026-03-11 05:20:36] 2026-03-11 09:20:07,350 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:07,350 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:07,578 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:07,641 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:07,795 | INFO     | [job] control thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,085 | INFO     | [data] control thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,339 | INFO     | [payload] control thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,465 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:20:36] 2026-03-11 09:20:08,575 | INFO     | [job] validate thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,637 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,637 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,647 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:08,851 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:09,172 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:09,396 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:20:36] 2026-03-11 09:20:12,481 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:20:36] 2026-03-11 09:20:13,994 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513464964928)>', '<ExcThread(monitor, started 140513168566016)>']
[2026-03-11 05:20:36] 2026-03-11 09:20:19,019 | INFO     | all workflow threads have been joined
[2026-03-11 05:20:36] 2026-03-11 09:20:19,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:20:36] 2026-03-11 09:20:19,020 | INFO     | traces error code: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:19,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:20:36] 2026-03-11 09:20:36,653 | INFO     | PID=38649 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-11 05:20:36] 2026-03-11 09:20:36,653 | INFO     | .. there are 3 such processes running
[2026-03-11 05:20:36] 2026-03-11 09:20:36,654 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:20:36] 2026-03-11 09:20:36,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:20:36] 2026-03-11 09:20:36,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:20:36] 2026-03-11 09:20:36,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:20:36] 2026-03-11 09:20:36,654 | INFO     | [monitor] control thread has ended
[2026-03-11 05:20:36] 2026-03-11 09:20:36,732 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:20:36] 2026-03-11 09:20:36,735 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:20:36] 2026-03-11 09:20:36,737 [wrapper] pilotpid: 38649
[2026-03-11 05:20:36] 2026-03-11 09:20:36,739 [wrapper] Pilot exit status: 0
[2026-03-11 05:20:36] 2026-03-11 09:20:36,748 [wrapper] pandaids: 7036175442
[2026-03-11 05:20:36] 2026-03-11 09:20:36,798 [wrapper] cleanup supervisor_pilot 31580 38650
[2026-03-11 05:20:36] 2026-03-11 09:20:36,800 [wrapper] Test setup, not cleaning
[2026-03-11 05:20:36] 2026-03-11 09:20:36,802 [wrapper] apfmon messages muted
[2026-03-11 05:20:36] 2026-03-11 09:20:36,804 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:20:36] 2026-03-11 09:20:36,806 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:20:36]  *** Error codes and diagnostics ***
[2026-03-11 05:20:36]     "exeErrorCode": 0,
[2026-03-11 05:20:36]     "exeErrorDiag": "",
[2026-03-11 05:20:36]     "pilotErrorCode": 0,
[2026-03-11 05:20:36]     "pilotErrorDiag": "",
[2026-03-11 05:20:36]  *** Listing of results directory ***
[2026-03-11 05:20:36] total 353088
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas    584627 Mar  2 19:05 pilot3.tar.gz
[2026-03-11 05:20:36] -rwx------ 1 boincer umatlas     36322 Mar  2 19:08 runpilot2-wrapper.sh
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas      5111 Mar  2 19:11 queuedata.json
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas       100 Mar 11 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:20:36] -rwxr-xr-x 1 boincer umatlas      7986 Mar 11 01:17 run_atlas
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas       105 Mar 11 01:17 job.xml
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas 197958782 Mar 11 01:17 EVNT.48460294._000003.pool.root.1
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas    597962 Mar 11 01:17 input.tar.gz
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 01:17 start_atlas.sh
[2026-03-11 05:20:36] drwxrwx--x 2 boincer umatlas      4096 Mar 11 01:17 shared
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas         0 Mar 11 01:17 boinc_lockfile
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas      2620 Mar 11 01:17 pandaJob.out
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas        57 Mar 11 01:17 setup.sh.local
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas   1006644 Mar 11 01:17 agis_schedconf.cvmfs.json
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas       438 Mar 11 01:17 workernode_map.json
[2026-03-11 05:20:36] drwx------ 5 boincer umatlas      4096 Mar 11 01:17 pilot3
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas      6037 Mar 11 05:11 init_data.xml
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas 154691899 Mar 11 05:19 HITS.48851541._000067.pool.root.1
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas       531 Mar 11 05:19 boinc_task_state.xml
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas      1050 Mar 11 05:19 memory_monitor_summary.json
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas   1511578 Mar 11 05:19 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas    473889 Mar 11 05:19 log.48851541._000067.job.log.tgz.1
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas      6398 Mar 11 05:20 heartbeat.json
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas        29 Mar 11 05:20 wrapper_checkpoint.txt
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas      8192 Mar 11 05:20 boinc_mmap_file
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas        95 Mar 11 05:20 pilot_heartbeat.json
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas       820 Mar 11 05:20 pilotlog.txt
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas   2012661 Mar 11 05:20 log.48851541._000067.job.log.1
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas       357 Mar 11 05:20 output.list
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas       620 Mar 11 05:20 runtime_log
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas   2508800 Mar 11 05:20 result.tar.gz
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas       660 Mar 11 05:20 vkMODmBUSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnLFLDmmBVBfn.diag
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas      9332 Mar 11 05:20 runtime_log.err
[2026-03-11 05:20:36] -rw-r--r-- 1 boincer umatlas     21216 Mar 11 05:20 stderr.txt
[2026-03-11 05:20:36] HITS file was successfully produced:
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas 154691899 Mar 11 05:19 shared/HITS.pool.root.1
[2026-03-11 05:20:36]  *** Contents of shared directory: ***
[2026-03-11 05:20:36] total 347444
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas 197958782 Mar 11 01:17 ATLAS.root_0
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas    597962 Mar 11 01:17 input.tar.gz
[2026-03-11 05:20:36] -rw-r--r-- 2 boincer umatlas     15845 Mar 11 01:17 start_atlas.sh
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas 154691899 Mar 11 05:19 HITS.pool.root.1
[2026-03-11 05:20:36] -rw------- 1 boincer umatlas   2508800 Mar 11 05:20 result.tar.gz
05:20:37 (34474): run_atlas exited; CPU time 110144.582155
05:20:37 (34474): called boinc_finish(0)

</stderr_txt>
]]>

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