Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:26:46 (1642402): wrapper (7.7.26015): starting
22:26:46 (1642402): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 22:26:46] Arguments: --nthreads 4
[2026-03-13 22:26:46] Threads: 4
[2026-03-13 22:26:46] Checking for CVMFS
[2026-03-13 22:26:46] No cvmfs_config command found, will try listing directly
[2026-03-13 22:26:46] CVMFS is ok
[2026-03-13 22:26:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 22:26:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 22:26:46] Further information can be found at the LHC@home message board.
[2026-03-13 22:26:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 22:26:46] Checking for apptainer binary...
[2026-03-13 22:26:46] which: no apptainer in ((null))
[2026-03-13 22:26:46] apptainer is not installed, using version from CVMFS
[2026-03-13 22:26:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 22:26:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-13 22:26:47] apptainer works
[2026-03-13 22:26:47] Set ATHENA_PROC_NUMBER=4
[2026-03-13 22:26:47] Set ATHENA_CORE_NUMBER=4
[2026-03-13 22:26:47] Starting ATLAS job with PandaID=7049529054
[2026-03-13 22:26:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-14 01:34:30]  *** The last 200 lines of the pilot log: ***
[2026-03-14 01:34:30] 2026-03-14 00:33:51,052 | INFO     | job 7049529054 has finished - writing final server update
[2026-03-14 01:34:30] 2026-03-14 00:33:51,052 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3425104/.job.ad'
[2026-03-14 01:34:30] 2026-03-14 00:33:51,052 | INFO     | total number of processed events: 400 (read)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,078 | INFO     | using path: /var/lib/boinc/var/slot72/slots/9/PanDA_Pilot-7049529054/memory_monitor_summary.json (trf name=prmon)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,078 | INFO     | extracted standard info from prmon json
[2026-03-14 01:34:30] 2026-03-14 00:33:51,079 | INFO     | extracted standard memory fields from prmon json
[2026-03-14 01:34:30] 2026-03-14 00:33:51,079 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-14 01:34:30] 2026-03-14 00:33:51,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-14 01:34:30] 2026-03-14 00:33:51,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-14 01:34:30] 2026-03-14 00:33:51,081 | INFO     | fitting pss+swap vs Time
[2026-03-14 01:34:30] 2026-03-14 00:33:51,081 | INFO     | sum of square deviations: 1931608310.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | sum of deviations: 5903518908.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | mean x: 1773442830.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | mean y: 2326919.2989130435
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | intersect: -5417795384.378954
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | chi2: 1.875240399844479
[2026-03-14 01:34:30] 2026-03-14 00:33:51,082 | INFO     | sum of square deviations: 1778377530.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | sum of deviations: 17190106342.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | mean x: 1773442678.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | mean y: 2337896.9832402235
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | intersect: -17140067307.754847
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | chi2: 1.0690135842115633
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | current chi2=1.0690135842115633 (change=42.99325119594155 %)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,083 | INFO     | sum of square deviations: 1633472487.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | sum of deviations: 16628302411.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | mean x: 1773442525.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | mean y: 2337305.5804597703
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | intersect: -18050821746.128574
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | chi2: 1.0696581385763544
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | current chi2=1.0696581385763544 (change=-0.06029431003596017 %)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,084 | INFO     | right removable region: 173
[2026-03-14 01:34:30] 2026-03-14 00:33:51,087 | INFO     | sum of square deviations: 1778377530.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | sum of deviations: -12076415281.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | mean x: 1773442983.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | mean y: 2344513.134078212
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | intersect: 12045250801.926102
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | chi2: 0.8256523624644246
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | current chi2=0.8256523624644246 (change=55.97085245534924 %)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,088 | INFO     | sum of square deviations: 1633472487.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | sum of deviations: -11955649127.999998
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | mean x: 1773443135.5
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | mean y: 2344382.540229885
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | intersect: 12982461304.465525
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | chi2: 0.8258952002428984
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | current chi2=0.8258952002428984 (change=-0.029411625220686567 %)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | left removable region: 20
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | sum of square deviations: 1110539892.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,089 | INFO     | sum of deviations: -550940958.9999996
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | mean x: 1773443105.0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | mean y: 2356035.777777778
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | intersect: 882164543.3686397
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | chi2: 0.0012107431209996415
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | current memory leak: -0.50 B/s (using 153 data points, chi2=0.00)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | could have reported an average CPU frequency of 3558 MHz (10 samples)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | ..............................
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . Timing measurements:
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . get job = 0 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . initial setup = 6 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . payload setup = 6 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . stage-in = 0 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . payload execution = 11179 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . stage-out = 0 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | . log creation = 0 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,090 | INFO     | ..............................
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | 
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | job summary report
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | --------------------------------------------------
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | PanDA job id: 7049529054
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | task id: 48967059
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | errors: (none)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | pilot state: finished 
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | transexitcode: 0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,138 | INFO     | exeerrorcode: 0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | exeerrordiag: 
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | exitcode: 0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | exitmsg: OK
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | cpuconsumptiontime: 42918 s
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | nevents: 400
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | neventsw: 0
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | pid: 1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | pgrp: 1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | corecount: 4
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | event service: False
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | sizes: {0: 2280224, 11: 2280224, 11189: 2309516, 11190: 2309515, 11192: 2318591, 11194: 2318647, 11195: 2318969}
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | --------------------------------------------------
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | 
[2026-03-14 01:34:30] 2026-03-14 00:33:51,139 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/9
[2026-03-14 01:34:30] 2026-03-14 00:33:51,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,156 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | job 7049529054 has completed (purged errors)
[2026-03-14 01:34:30] 2026-03-14 00:33:51,157 | INFO     | overall cleanup function is called
[2026-03-14 01:34:30] 2026-03-14 00:33:52,163 | INFO     | --- collectZombieJob: --- 10, [1652944]
[2026-03-14 01:34:30] 2026-03-14 00:33:52,164 | INFO     | zombie collector waiting for pid 1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:52,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-14 01:34:30] 2026-03-14 00:33:52,164 | INFO     | collected zombie processes
[2026-03-14 01:34:30] 2026-03-14 00:33:52,164 | INFO     | will attempt to kill all subprocesses of pid=1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:52,582 | INFO     | process IDs to be killed: [1652944] (in reverse order)
[2026-03-14 01:34:30] 2026-03-14 00:33:52,805 | WARNING  | found no corresponding commands to process id(s)
[2026-03-14 01:34:30] 2026-03-14 00:33:52,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-14 01:34:30] 2026-03-14 00:33:52,835 | INFO     | did not find any defunct processes belonging to 1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:52,863 | INFO     | did not find any defunct processes belonging to 1652944
[2026-03-14 01:34:30] 2026-03-14 00:33:52,864 | INFO     | ready for new job
[2026-03-14 01:34:30] 2026-03-14 00:33:52,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-14 01:34:30] 2026-03-14 00:33:52,865 | INFO     | **************************************
[2026-03-14 01:34:30] 2026-03-14 00:33:52,865 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-14 01:34:30] 2026-03-14 00:33:52,865 | INFO     | **************************************
[2026-03-14 01:34:30] 2026-03-14 00:33:52,865 | INFO     | 
[2026-03-14 01:34:30] 2026-03-14 00:33:52,870 | INFO     | architecture information:
[2026-03-14 01:34:30] 2026-03-14 00:33:52,871 | INFO     | executing command: cat /etc/os-release
[2026-03-14 01:34:30] 2026-03-14 00:33:52,890 | INFO     | cat /etc/os-release:
[2026-03-14 01:34:30] NAME="CentOS Linux"
[2026-03-14 01:34:30] VERSION="7 (Core)"
[2026-03-14 01:34:30] ID="centos"
[2026-03-14 01:34:30] ID_LIKE="rhel fedora"
[2026-03-14 01:34:30] VERSION_ID="7"
[2026-03-14 01:34:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-14 01:34:30] ANSI_COLOR="0;31"
[2026-03-14 01:34:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-14 01:34:30] HOME_URL="https://www.centos.org/"
[2026-03-14 01:34:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-14 01:34:30] 
[2026-03-14 01:34:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-14 01:34:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-14 01:34:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-14 01:34:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-14 01:34:30] 
[2026-03-14 01:34:30] 2026-03-14 00:33:52,890 | INFO     | **************************************
[2026-03-14 01:34:30] 2026-03-14 00:33:53,393 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/9
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | INFO     | sufficient remaining disk space (20753416192 B)
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | INFO     | current server update state: UPDATING_FINAL
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | INFO     | update_server=False
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-14 01:34:30] 2026-03-14 00:33:53,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:34:30] 2026-03-14 00:33:53,412 | INFO     | aborting loop
[2026-03-14 01:34:30] 2026-03-14 00:33:53,582 | INFO     | all job control threads have been joined
[2026-03-14 01:34:30] 2026-03-14 00:33:53,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-14 01:34:30] 2026-03-14 00:33:54,184 | INFO     | all data control threads have been joined
[2026-03-14 01:34:30] 2026-03-14 00:33:54,415 | INFO     | [job] retrieve thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,417 | INFO     | [job] job monitor thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,450 | INFO     | [job] validate thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,587 | INFO     | [job] control thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,639 | INFO     | [data] copytool_in thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,734 | INFO     | [job] create_data_payload thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:54,787 | INFO     | all payload control threads have been joined
[2026-03-14 01:34:30] 2026-03-14 00:33:54,812 | INFO     | [payload] failed_post thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,189 | INFO     | [data] control thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,297 | INFO     | [payload] validate_post thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,611 | INFO     | [data] copytool_out thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,735 | INFO     | [payload] execute_payloads thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,792 | INFO     | [payload] control thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:55,852 | INFO     | [payload] validate_pre thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:33:56,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-14 01:34:30] 2026-03-14 00:33:56,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-14 01:34:30] 2026-03-14 00:33:57,152 | INFO     | [job] queue monitor thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:34:00,181 | INFO     | [data] queue_monitor thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:34:04,352 | INFO     | job.realtimelogging is not enabled
[2026-03-14 01:34:30] 2026-03-14 00:34:05,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-14 01:34:30] 2026-03-14 00:34:23,470 | INFO     | [monitor] cgroup control has ended
[2026-03-14 01:34:30] 2026-03-14 00:34:23,708 | INFO     | PID=1647033 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-14 01:34:30] 2026-03-14 00:34:23,708 | INFO     | .. there are 50 such processes running
[2026-03-14 01:34:30] 2026-03-14 00:34:23,708 | INFO     | found 0 job(s) in 20 queues
[2026-03-14 01:34:30] 2026-03-14 00:34:23,708 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-14 01:34:30] 2026-03-14 00:34:23,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-14 01:34:30] 2026-03-14 00:34:24,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23095013345088)>', '<ExcThread(monitor, started 23094695528192)>']
[2026-03-14 01:34:30] 2026-03-14 00:34:25,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-14 01:34:30] 2026-03-14 00:34:25,719 | INFO     | [monitor] control thread has ended
[2026-03-14 01:34:30] 2026-03-14 00:34:29,916 | INFO     | all workflow threads have been joined
[2026-03-14 01:34:30] 2026-03-14 00:34:29,917 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-14 01:34:30] 2026-03-14 00:34:29,917 | INFO     | traces error code: 0
[2026-03-14 01:34:30] 2026-03-14 00:34:29,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-14 01:34:30] 2026-03-14 00:34:30,054 [wrapper] ==== pilot stdout END ====
[2026-03-14 01:34:30] 2026-03-14 00:34:30,057 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-14 01:34:30] 2026-03-14 00:34:30,059 [wrapper] pilotpid: 1647033
[2026-03-14 01:34:30] 2026-03-14 00:34:30,061 [wrapper] Pilot exit status: 0
[2026-03-14 01:34:30] 2026-03-14 00:34:30,071 [wrapper] pandaids: 7049529054
[2026-03-14 01:34:30] 2026-03-14 00:34:30,203 [wrapper] cleanup supervisor_pilot 3077599 1647034
[2026-03-14 01:34:30] 2026-03-14 00:34:30,206 [wrapper] Test setup, not cleaning
[2026-03-14 01:34:30] 2026-03-14 00:34:30,208 [wrapper] apfmon messages muted
[2026-03-14 01:34:30] 2026-03-14 00:34:30,211 [wrapper] ==== wrapper stdout END ====
[2026-03-14 01:34:30] 2026-03-14 00:34:30,213 [wrapper] ==== wrapper stderr END ====
[2026-03-14 01:34:30]  *** Error codes and diagnostics ***
[2026-03-14 01:34:30]     "exeErrorCode": 0,
[2026-03-14 01:34:30]     "exeErrorDiag": "",
[2026-03-14 01:34:30]     "pilotErrorCode": 0,
[2026-03-14 01:34:30]     "pilotErrorDiag": "",
[2026-03-14 01:34:30]  *** Listing of results directory ***
[2026-03-14 01:34:30] total 484092
[2026-03-14 01:34:30] -rwx------. 1 boinc boinc     36322 Mar 11 05:26 runpilot2-wrapper.sh
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc      5111 Mar 11 05:26 queuedata.json
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc    585013 Mar 11 05:26 pilot3.tar.gz
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc       100 Mar 13 22:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-14 01:34:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 22:26 run_atlas
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc       105 Mar 13 22:26 job.xml
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc      6707 Mar 13 22:26 init_data.xml
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc 227125631 Mar 13 22:26 EVNT.48967057._000092.pool.root.1
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc     15845 Mar 13 22:26 start_atlas.sh
[2026-03-14 01:34:30] drwxrwx--x. 2 boinc boinc      4096 Mar 13 22:26 shared
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc    597510 Mar 13 22:26 input.tar.gz
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc         0 Mar 13 22:26 boinc_lockfile
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc      2547 Mar 13 22:26 pandaJob.out
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc   1006721 Mar 13 22:26 agis_schedconf.cvmfs.json
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc       443 Mar 13 22:27 workernode_map.json
[2026-03-14 01:34:30] drwx------. 5 boinc boinc      4096 Mar 13 22:27 pilot3
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc 260753185 Mar 14 01:33 HITS.48967059._002429.pool.root.1
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc       530 Mar 14 01:33 boinc_task_state.xml
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc      1034 Mar 14 01:33 memory_monitor_summary.json
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc        95 Mar 14 01:33 pilot_heartbeat.json
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc   1511579 Mar 14 01:33 agis_ddmendpoints.agis.ALL.json
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc    376090 Mar 14 01:33 log.48967059._002429.job.log.tgz.1
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc      6356 Mar 14 01:33 heartbeat.json
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc      8192 Mar 14 01:34 boinc_mmap_file
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc        28 Mar 14 01:34 wrapper_checkpoint.txt
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc      4901 Mar 14 01:34 pilotlog.txt
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc   1572628 Mar 14 01:34 log.48967059._002429.job.log.1
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc       357 Mar 14 01:34 output.list
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc       620 Mar 14 01:34 runtime_log
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc   1966080 Mar 14 01:34 result.tar.gz
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc      9205 Mar 14 01:34 runtime_log.err
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc       665 Mar 14 01:34 m0KMDmLKQK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxefLDmfGO54m.diag
[2026-03-14 01:34:30] -rw-r--r--. 1 boinc boinc     20898 Mar 14 01:34 stderr.txt
[2026-03-14 01:34:30] HITS file was successfully produced:
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc 260753185 Mar 14 01:33 shared/HITS.pool.root.1
[2026-03-14 01:34:30]  *** Contents of shared directory: ***
[2026-03-14 01:34:30] total 478976
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc 227125631 Mar 13 22:26 ATLAS.root_0
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc     15845 Mar 13 22:26 start_atlas.sh
[2026-03-14 01:34:30] -rw-r--r--. 2 boinc boinc    597510 Mar 13 22:26 input.tar.gz
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc 260753185 Mar 14 01:33 HITS.pool.root.1
[2026-03-14 01:34:30] -rw-------. 1 boinc boinc   1966080 Mar 14 01:34 result.tar.gz
01:34:31 (1642402): run_atlas exited; CPU time 43442.988157
01:34:31 (1642402): called boinc_finish(0)

</stderr_txt>
]]>

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