Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:40 (446881): wrapper (7.7.26015): starting
00:03:40 (446881): wrapper: running run_atlas (--nthreads 9)
[2026-03-11 00:03:40] Arguments: --nthreads 9
[2026-03-11 00:03:40] Threads: 9
[2026-03-11 00:03:40] Checking for CVMFS
[2026-03-11 00:03:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 00:03:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 00:03:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 00:03:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 00:03:42] 2.13.3.0 11958 110211 228744 157140 3 439 35277686 40960001 27309 16776704 0 312953178 99.683 279550396 35950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 00:03:42] CVMFS is ok
[2026-03-11 00:03:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 00:03:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 00:03:42] Further information can be found at the LHC@home message board.
[2026-03-11 00:03:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 00:03:42] Checking for apptainer binary...
[2026-03-11 00:03:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 00:03:42] Running /usr/bin/apptainer --version
[2026-03-11 00:03:42] apptainer version 1.4.5-2.el9
[2026-03-11 00:03:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 00:03:43] c-212-1.aglt2.org
[2026-03-11 00:03:43] apptainer works
[2026-03-11 00:03:43] Set ATHENA_PROC_NUMBER=9
[2026-03-11 00:03:43] Set ATHENA_CORE_NUMBER=9
[2026-03-11 00:03:43] Starting ATLAS job with PandaID=7036134508
[2026-03-11 00:03:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:20:11 (446881): BOINC client no longer exists - exiting
01:20:11 (446881): timer handler: client dead, exiting
01:29:38 (769829): wrapper (7.7.26015): starting
01:29:38 (769829): wrapper: running run_atlas (--nthreads 8)
[2026-03-11 01:29:38] Arguments: --nthreads 8
[2026-03-11 01:29:38] Threads: 8
[2026-03-11 01:29:38] This job has been restarted, cleaning up previous attempt
[2026-03-11 01:29:38] Checking for CVMFS
[2026-03-11 01:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 01:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 01:29:38] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 01:29:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 01:29:39] 2.13.3.0 11958 110297 229924 157144 1 433 37160487 40960001 22141 16776704 0 313654541 99.683 279997972 35947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-11 01:29:39] CVMFS is ok
[2026-03-11 01:29:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-11 01:29:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-11 01:29:39] Further information can be found at the LHC@home message board.
[2026-03-11 01:29:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 01:29:39] Checking for apptainer binary...
[2026-03-11 01:29:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-11 01:29:39] Running /usr/bin/apptainer --version
[2026-03-11 01:29:39] apptainer version 1.4.5-2.el9
[2026-03-11 01:29:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 01:29:39] c-212-1.aglt2.org
[2026-03-11 01:29:39] apptainer works
[2026-03-11 01:29:39] Set ATHENA_PROC_NUMBER=8
[2026-03-11 01:29:39] Set ATHENA_CORE_NUMBER=8
[2026-03-11 01:29:39] Starting ATLAS job with PandaID=7036134508
[2026-03-11 01:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:36:24]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:36:24] 2026-03-11 09:35:26,970 | INFO     | total number of processed events: 400 (read)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,035 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7036134508/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,035 | INFO     | extracted standard info from prmon json
[2026-03-11 05:36:24] 2026-03-11 09:35:27,035 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 05:36:24] 2026-03-11 09:35:27,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 05:36:24] 2026-03-11 09:35:27,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 05:36:24] 2026-03-11 09:35:27,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 05:36:24] 2026-03-11 09:35:27,043 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:36:24] 2026-03-11 09:35:27,045 | INFO     | sum of square deviations: 4340507184.489654
[2026-03-11 05:36:24] 2026-03-11 09:35:27,047 | INFO     | sum of deviations: 34593379513.49381
[2026-03-11 05:36:24] 2026-03-11 09:35:27,047 | INFO     | mean x: 1773214340.2987552
[2026-03-11 05:36:24] 2026-03-11 09:35:27,047 | INFO     | mean y: 2533432.979253112
[2026-03-11 05:36:24] 2026-03-11 09:35:27,047 | INFO     | intersect: -14129795814.607693
[2026-03-11 05:36:24] 2026-03-11 09:35:27,047 | INFO     | chi2: 1.27758064922287
[2026-03-11 05:36:24] 2026-03-11 09:35:27,048 | INFO     | sum of square deviations: 4075947439.0339046
[2026-03-11 05:36:24] 2026-03-11 09:35:27,078 | INFO     | sum of deviations: 33738176599.720356
[2026-03-11 05:36:24] 2026-03-11 09:35:27,078 | INFO     | mean x: 1773214187.8050847
[2026-03-11 05:36:24] 2026-03-11 09:35:27,078 | INFO     | mean y: 2532940.2330508474
[2026-03-11 05:36:24] 2026-03-11 09:35:27,078 | INFO     | intersect: -14675039406.351866
[2026-03-11 05:36:24] 2026-03-11 09:35:27,079 | INFO     | chi2: 1.2780028645101869
[2026-03-11 05:36:24] 2026-03-11 09:35:27,079 | INFO     | current chi2=1.2780028645101869 (change=-0.03304803399876252 %)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,079 | INFO     | right removable region: 235
[2026-03-11 05:36:24] 2026-03-11 09:35:27,079 | INFO     | sum of square deviations: 4075903519.0339046
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | sum of deviations: -51931257.81355863
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | mean x: 1773214492.8050847
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | mean y: 2553225.1779661016
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | intersect: 25145825.457775
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | chi2: 0.02694542158549626
[2026-03-11 05:36:24] 2026-03-11 09:35:27,081 | INFO     | current chi2=0.02694542158549626 (change=97.89090249591 %)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,082 | INFO     | sum of square deviations: 3822291321.1774945
[2026-03-11 05:36:24] 2026-03-11 09:35:27,099 | INFO     | sum of deviations: -4161875257.770563
[2026-03-11 05:36:24] 2026-03-11 09:35:27,099 | INFO     | mean x: 1773214645.3073592
[2026-03-11 05:36:24] 2026-03-11 09:35:27,099 | INFO     | mean y: 2555674.9826839827
[2026-03-11 05:36:24] 2026-03-11 09:35:27,099 | INFO     | intersect: 1933308079.4717414
[2026-03-11 05:36:24] 2026-03-11 09:35:27,100 | INFO     | chi2: 0.0067512163353314475
[2026-03-11 05:36:24] 2026-03-11 09:35:27,100 | INFO     | current chi2=0.0067512163353314475 (change=74.94484799983466 %)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,100 | INFO     | sum of square deviations: 3579423144.8185973
[2026-03-11 05:36:24] 2026-03-11 09:35:27,101 | INFO     | sum of deviations: -4661540578.057518
[2026-03-11 05:36:24] 2026-03-11 09:35:27,101 | INFO     | mean x: 1773214797.8097346
[2026-03-11 05:36:24] 2026-03-11 09:35:27,101 | INFO     | mean y: 2555986.207964602
[2026-03-11 05:36:24] 2026-03-11 09:35:27,102 | INFO     | intersect: 2311842259.2118917
[2026-03-11 05:36:24] 2026-03-11 09:35:27,117 | INFO     | chi2: 0.006288001489951331
[2026-03-11 05:36:24] 2026-03-11 09:35:27,117 | INFO     | current chi2=0.006288001489951331 (change=6.861205779408272 %)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,117 | INFO     | left removable region: 30
[2026-03-11 05:36:24] 2026-03-11 09:35:27,117 | INFO     | sum of square deviations: 2671544737.6390333
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | sum of deviations: -2957606382.34634
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | mean x: 1773215072.307317
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | mean y: 2554687.4975609756
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | intersect: 1965640740.761123
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | chi2: 0.005648341952012345
[2026-03-11 05:36:24] 2026-03-11 09:35:27,119 | INFO     | current memory leak: -1.11 B/s (using 205 data points, chi2=0.01)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | could have reported an average CPU frequency of 3259 MHz (12 samples)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | ..............................
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | . Timing measurements:
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | . get job = 0 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | . initial setup = 1 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,120 | INFO     | . payload setup = 8 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,121 | INFO     | . stage-in = 0 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,121 | INFO     | . payload execution = 14705 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,135 | INFO     | . stage-out = 3 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,135 | INFO     | . log creation = 0 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,135 | INFO     | ..............................
[2026-03-11 05:36:24] 2026-03-11 09:35:27,503 | INFO     | 
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | job summary report
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | --------------------------------------------------
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | PanDA job id: 7036134508
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | task id: 48838581
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | errors: (none)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | pilot state: finished 
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | transexitcode: 0
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | exeerrorcode: 0
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | exeerrordiag: 
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | exitcode: 0
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | exitmsg: OK
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | cpuconsumptiontime: 37820 s
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | nevents: 400
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | neventsw: 0
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | pid: 808861
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | pgrp: 808861
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | corecount: 8
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | event service: False
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | sizes: {0: 2280055, 1: 2280261, 11: 2280289, 14718: 2311090, 14722: 2320088, 14723: 2320144, 14724: 2320466}
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | --------------------------------------------------
[2026-03-11 05:36:24] 2026-03-11 09:35:27,505 | INFO     | 
[2026-03-11 05:36:24] 2026-03-11 09:35:27,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-11 05:36:24] 2026-03-11 09:35:27,527 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | job 7036134508 has completed (purged errors)
[2026-03-11 05:36:24] 2026-03-11 09:35:27,529 | INFO     | overall cleanup function is called
[2026-03-11 05:36:24] 2026-03-11 09:35:28,539 | INFO     | --- collectZombieJob: --- 10, [808861]
[2026-03-11 05:36:24] 2026-03-11 09:35:28,539 | INFO     | zombie collector waiting for pid 808861
[2026-03-11 05:36:24] 2026-03-11 09:35:28,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:36:24] 2026-03-11 09:35:28,539 | INFO     | collected zombie processes
[2026-03-11 05:36:24] 2026-03-11 09:35:28,539 | INFO     | will attempt to kill all subprocesses of pid=808861
[2026-03-11 05:36:24] 2026-03-11 09:35:29,367 | INFO     | process IDs to be killed: [808861] (in reverse order)
[2026-03-11 05:36:24] 2026-03-11 09:35:29,531 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:36:24] 2026-03-11 09:35:29,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:36:24] 2026-03-11 09:35:29,554 | INFO     | did not find any defunct processes belonging to 808861
[2026-03-11 05:36:24] 2026-03-11 09:35:29,571 | INFO     | did not find any defunct processes belonging to 808861
[2026-03-11 05:36:24] 2026-03-11 09:35:29,572 | INFO     | ready for new job
[2026-03-11 05:36:24] 2026-03-11 09:35:29,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:36:24] 2026-03-11 09:35:29,574 | INFO     | **************************************
[2026-03-11 05:36:24] 2026-03-11 09:35:29,577 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:36:24] 2026-03-11 09:35:29,577 | INFO     | **************************************
[2026-03-11 05:36:24] 2026-03-11 09:35:29,577 | INFO     | 
[2026-03-11 05:36:24] 2026-03-11 09:35:29,582 | INFO     | architecture information:
[2026-03-11 05:36:24] 2026-03-11 09:35:29,582 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:36:24] 2026-03-11 09:35:29,598 | INFO     | cat /etc/os-release:
[2026-03-11 05:36:24] NAME="CentOS Linux"
[2026-03-11 05:36:24] VERSION="7 (Core)"
[2026-03-11 05:36:24] ID="centos"
[2026-03-11 05:36:24] ID_LIKE="rhel fedora"
[2026-03-11 05:36:24] VERSION_ID="7"
[2026-03-11 05:36:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:36:24] ANSI_COLOR="0;31"
[2026-03-11 05:36:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:36:24] HOME_URL="https://www.centos.org/"
[2026-03-11 05:36:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:36:24] 
[2026-03-11 05:36:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:36:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:36:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:36:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:36:24] 
[2026-03-11 05:36:24] 2026-03-11 09:35:29,598 | INFO     | **************************************
[2026-03-11 05:36:24] 2026-03-11 09:35:30,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-11 05:36:24] 2026-03-11 09:35:30,122 | INFO     | sufficient remaining disk space (125992697856 B)
[2026-03-11 05:36:24] 2026-03-11 09:35:30,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:36:24] 2026-03-11 09:35:30,123 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:36:24] 2026-03-11 09:35:30,123 | INFO     | update_server=False
[2026-03-11 05:36:24] 2026-03-11 09:35:30,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:36:24] 2026-03-11 09:35:30,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:36:24] 2026-03-11 09:35:30,313 | INFO     | all data control threads have been joined
[2026-03-11 05:36:24] 2026-03-11 09:35:30,448 | INFO     | all job control threads have been joined
[2026-03-11 05:36:24] 2026-03-11 09:35:30,603 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 05:36:24] 2026-03-11 09:35:30,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 05:36:24] 2026-03-11 09:35:30,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:36:24] 2026-03-11 09:35:30,603 | INFO     | will abort loop
[2026-03-11 05:36:24] 2026-03-11 09:35:31,096 | INFO     | all payload control threads have been joined
[2026-03-11 05:36:24] 2026-03-11 09:35:31,130 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,314 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,319 | INFO     | [data] control thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,453 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,457 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,458 | INFO     | [job] control thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,608 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,647 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:31,893 | INFO     | [job] validate thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:32,065 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:32,101 | INFO     | [payload] control thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:32,130 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:32,452 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:36:24] 2026-03-11 09:35:32,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:36:24] 2026-03-11 09:35:32,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:32,712 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:33,457 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:36,495 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:36:24] 2026-03-11 09:35:57,679 | INFO     | 14736s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-11 05:36:24] 2026-03-11 09:35:59,511 | INFO     | PID=792151 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 05:36:24] 2026-03-11 09:35:59,511 | INFO     | .. there are 29 such processes running
[2026-03-11 05:36:24] 2026-03-11 09:35:59,511 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:36:24] 2026-03-11 09:35:59,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:36:24] 2026-03-11 09:35:59,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:36:24] 2026-03-11 09:36:18,198 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:36:24] 2026-03-11 09:36:19,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140339495999296)>', '<ExcThread(monitor, started 140339054634752)>']
[2026-03-11 05:36:24] 2026-03-11 09:36:19,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:36:24] 2026-03-11 09:36:19,638 | INFO     | [monitor] control thread has ended
[2026-03-11 05:36:24] 2026-03-11 09:36:24,231 | INFO     | all workflow threads have been joined
[2026-03-11 05:36:24] 2026-03-11 09:36:24,231 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:36:24] 2026-03-11 09:36:24,231 | INFO     | traces error code: 0
[2026-03-11 05:36:24] 2026-03-11 09:36:24,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:36:24] 2026-03-11 09:36:24,588 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:36:24] 2026-03-11 09:36:24,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:36:24] 2026-03-11 09:36:24,596 [wrapper] pilotpid: 792151
[2026-03-11 05:36:24] 2026-03-11 09:36:24,599 [wrapper] Pilot exit status: 0
[2026-03-11 05:36:24] 2026-03-11 09:36:24,627 [wrapper] pandaids: 7036134508 7036134508
[2026-03-11 05:36:24] 2026-03-11 09:36:24,754 [wrapper] cleanup supervisor_pilot 1604411 792152
[2026-03-11 05:36:24] 2026-03-11 09:36:24,760 [wrapper] Test setup, not cleaning
[2026-03-11 05:36:24] 2026-03-11 09:36:24,764 [wrapper] apfmon messages muted
[2026-03-11 05:36:24] 2026-03-11 09:36:24,776 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:36:24] 2026-03-11 09:36:24,787 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:36:24]  *** Error codes and diagnostics ***
[2026-03-11 05:36:24]     "exeErrorCode": 0,
[2026-03-11 05:36:24]     "exeErrorDiag": "",
[2026-03-11 05:36:24]     "pilotErrorCode": 0,
[2026-03-11 05:36:24]     "pilotErrorDiag": "",
[2026-03-11 05:36:24]  *** Listing of results directory ***
[2026-03-11 05:36:24] total 779416
[2026-03-11 05:36:24] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 18:56 pilot3.tar.gz
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 18:57 queuedata.json
[2026-03-11 05:36:24] -rwx------. 1 boincer umatlas     36322 Mar  2 18:58 runpilot2-wrapper.sh
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas       100 Mar 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:36:24] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 11 00:03 run_atlas
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas       105 Mar 11 00:03 job.xml
[2026-03-11 05:36:24] -rw-r--r--. 3 boincer umatlas 286000226 Mar 11 00:03 EVNT.48220205._000191.pool.root.1
[2026-03-11 05:36:24] -rw-r--r--. 3 boincer umatlas 286000226 Mar 11 00:03 ATLAS.root_0
[2026-03-11 05:36:24] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-11 05:36:24] drwxrwx--x. 2 boincer umatlas      4096 Mar 11 00:03 shared
[2026-03-11 05:36:24] -rw-r--r--. 2 boincer umatlas    597966 Mar 11 00:03 input.tar.gz
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas         0 Mar 11 00:03 boinc_lockfile
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas      2588 Mar 11 01:29 pandaJob.out
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas        57 Mar 11 01:29 setup.sh.local
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas   1006644 Mar 11 01:29 agis_schedconf.cvmfs.json
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas       429 Mar 11 01:29 workernode_map.json
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas      6958 Mar 11 05:28 init_data.xml
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas 217644385 Mar 11 05:34 HITS.48838581._004543.pool.root.1
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas       532 Mar 11 05:34 boinc_task_state.xml
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas        96 Mar 11 05:35 pilot_heartbeat.json
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas      1044 Mar 11 05:35 memory_monitor_summary.json
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas   1511578 Mar 11 05:35 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas    454046 Mar 11 05:35 log.48838581._004543.job.log.tgz.1
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas      6341 Mar 11 05:35 heartbeat.json
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 05:36 boinc_mmap_file
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas        28 Mar 11 05:36 wrapper_checkpoint.txt
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas      5122 Mar 11 05:36 pilotlog.txt
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas   1808713 Mar 11 05:36 log.48838581._004543.job.log.1
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas       357 Mar 11 05:36 output.list
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas       620 Mar 11 05:36 runtime_log
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas   2283520 Mar 11 05:36 result.tar.gz
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas      9422 Mar 11 05:36 runtime_log.err
[2026-03-11 05:36:24] -rw-------. 1 boincer umatlas       783 Mar 11 05:36 0YVKDmQKSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvzELDmM4dFDn.diag
[2026-03-11 05:36:24] -rw-r--r--. 1 boincer umatlas     23448 Mar 11 05:36 stderr.txt
[2026-03-11 05:36:25] HITS file was successfully produced:
[2026-03-11 05:36:25] -rw-------. 1 boincer umatlas 217644385 Mar 11 05:34 shared/HITS.pool.root.1
[2026-03-11 05:36:25]  *** Contents of shared directory: ***
[2026-03-11 05:36:25] total 494684
[2026-03-11 05:36:25] -rw-r--r--. 3 boincer umatlas 286000226 Mar 11 00:03 ATLAS.root_0
[2026-03-11 05:36:25] -rw-r--r--. 2 boincer umatlas     15845 Mar 11 00:03 start_atlas.sh
[2026-03-11 05:36:25] -rw-r--r--. 2 boincer umatlas    597966 Mar 11 00:03 input.tar.gz
[2026-03-11 05:36:25] -rw-------. 1 boincer umatlas 217644385 Mar 11 05:34 HITS.pool.root.1
[2026-03-11 05:36:25] -rw-------. 1 boincer umatlas   2283520 Mar 11 05:36 result.tar.gz
05:36:26 (769829): run_atlas exited; CPU time 38355.505526
05:36:26 (769829): called boinc_finish(0)

</stderr_txt>
]]>

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