Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
23:11:14 (602624): wrapper (7.7.26015): starting
23:11:14 (602624): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 23:11:14] Arguments: --nthreads 4
[2026-03-10 23:11:14] Threads: 4
[2026-03-10 23:11:14] Checking for CVMFS
[2026-03-10 23:11:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 23:11:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 23:11:14] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 23:11:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 23:11:14] 2.13.3.0 1760492 6796 50168 157138 2 188 3509083 4096000 1788 130560 0 5464924 99.991 239196 813 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-10 23:11:14] CVMFS is ok
[2026-03-10 23:11:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 23:11:14] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-10 23:11:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-10 23:11:14] Further information can be found at the LHC@home message board.
[2026-03-10 23:11:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 23:11:14] Checking for apptainer binary...
[2026-03-10 23:11:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 23:11:14] Running /usr/bin/apptainer --version
[2026-03-10 23:11:14] apptainer version 1.4.5
[2026-03-10 23:11:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 23:11:14] OptiPlex7070-Ubuntu
[2026-03-10 23:11:14] apptainer works
[2026-03-10 23:11:14] Set ATHENA_PROC_NUMBER=4
[2026-03-10 23:11:14] Set ATHENA_CORE_NUMBER=4
[2026-03-10 23:11:14] Starting ATLAS job with PandaID=7049258845
[2026-03-10 23:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 01:52:46]  *** The last 200 lines of the pilot log: ***
[2026-03-11 01:52:46] 2026-03-11 05:52:03,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 01:52:46] 2026-03-11 05:52:03,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 01:52:46] 2026-03-11 05:52:03,344 | INFO     | fitting pss+swap vs Time
[2026-03-11 01:52:46] 2026-03-11 05:52:03,345 | INFO     | sum of square deviations: 1223016419.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,345 | INFO     | sum of deviations: 14551807359.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,346 | INFO     | mean x: 1773203489.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,346 | INFO     | mean y: 2310848.0126582277
[2026-03-11 01:52:46] 2026-03-11 05:52:03,346 | INFO     | intersect: -21095783319.8969
[2026-03-11 01:52:46] 2026-03-11 05:52:03,346 | INFO     | chi2: 1.0784236457017013
[2026-03-11 01:52:46] 2026-03-11 05:52:03,346 | INFO     | sum of square deviations: 1110539892.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,347 | INFO     | sum of deviations: 13787988539.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,347 | INFO     | mean x: 1773203337.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,347 | INFO     | mean y: 2309812.052287582
[2026-03-11 01:52:46] 2026-03-11 05:52:03,347 | INFO     | intersect: -22013024768.89814
[2026-03-11 01:52:46] 2026-03-11 05:52:03,347 | INFO     | chi2: 1.07927184661177
[2026-03-11 01:52:46] 2026-03-11 05:52:03,348 | INFO     | current chi2=1.07927184661177 (change=-0.07865192064818276 %)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,348 | INFO     | right removable region: 152
[2026-03-11 01:52:46] 2026-03-11 05:52:03,348 | INFO     | sum of square deviations: 1110539892.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,348 | INFO     | sum of deviations: -113335133.0000004
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | mean x: 1773203642.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | mean y: 2330335.2418300654
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | intersect: 183293011.1887785
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | chi2: 0.01215906759457675
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | current chi2=0.01215906759457675 (change=98.8725147447351 %)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,349 | INFO     | sum of square deviations: 1005179777.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | sum of deviations: 1948109908.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | mean x: 1773203794.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | mean y: 2327343.4864864866
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | intersect: -3434267741.3036504
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | chi2: 0.003921767356568048
[2026-03-11 01:52:46] 2026-03-11 05:52:03,350 | INFO     | current chi2=0.003921767356568048 (change=67.7461505492637 %)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,351 | INFO     | sum of square deviations: 906703512.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,351 | INFO     | sum of deviations: 1994718544.0000005
[2026-03-11 01:52:46] 2026-03-11 05:52:03,351 | INFO     | mean x: 1773203947.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,352 | INFO     | mean y: 2327295.5804195805
[2026-03-11 01:52:46] 2026-03-11 05:52:03,352 | INFO     | intersect: -3898664316.9621534
[2026-03-11 01:52:46] 2026-03-11 05:52:03,352 | INFO     | chi2: 0.0009929675723538245
[2026-03-11 01:52:46] 2026-03-11 05:52:03,352 | INFO     | current chi2=0.0009929675723538245 (change=74.680609988483 %)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,352 | INFO     | sum of square deviations: 814878534.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | sum of deviations: 1532191198.500001
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | mean x: 1773204099.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | mean y: 2328062.992753623
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | intersect: -3331773400.4420033
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | chi2: 0.0008382427199221445
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | current chi2=0.0008382427199221445 (change=15.582064987772515 %)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,353 | INFO     | left removable region: 40
[2026-03-11 01:52:46] 2026-03-11 05:52:03,354 | INFO     | sum of square deviations: 435610028.0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,354 | INFO     | sum of deviations: 81677810.50000006
[2026-03-11 01:52:46] 2026-03-11 05:52:03,354 | INFO     | mean x: 1773204526.5
[2026-03-11 01:52:46] 2026-03-11 05:52:03,354 | INFO     | mean y: 2329781.598214286
[2026-03-11 01:52:46] 2026-03-11 05:52:03,354 | INFO     | intersect: -330149853.8182811
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | chi2: 0.0003305728734093394
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | current memory leak: 0.19 B/s (using 112 data points, chi2=0.00)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | could have reported an average CPU frequency of 3532 MHz (9 samples)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | ..............................
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | . Timing measurements:
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | . get job = 0 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | . initial setup = 5 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,355 | INFO     | . payload setup = 2 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,356 | INFO     | . stage-in = 0 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,356 | INFO     | . payload execution = 9620 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,356 | INFO     | . stage-out = 0 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,356 | INFO     | . log creation = 0 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,356 | INFO     | ..............................
[2026-03-11 01:52:46] 2026-03-11 05:52:03,396 | INFO     | time since job start (9639s) is within the limit (345600.0s)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,426 | INFO     | 
[2026-03-11 01:52:46] 2026-03-11 05:52:03,426 | INFO     | job summary report
[2026-03-11 01:52:46] 2026-03-11 05:52:03,426 | INFO     | --------------------------------------------------
[2026-03-11 01:52:46] 2026-03-11 05:52:03,426 | INFO     | PanDA job id: 7049258845
[2026-03-11 01:52:46] 2026-03-11 05:52:03,426 | INFO     | task id: 48967011
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | errors: (none)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | pilot state: finished 
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | transexitcode: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | exeerrorcode: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | exeerrordiag: 
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | exitcode: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | exitmsg: OK
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | cpuconsumptiontime: 37586 s
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | nevents: 400
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | neventsw: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,427 | INFO     | pid: 610978
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | pgrp: 610978
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | corecount: 4
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | event service: False
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | sizes: {0: 2279148, 1: 2280280, 11: 2280280, 9627: 2308899, 9628: 2317981, 9629: 2318183}
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | --------------------------------------------------
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | 
[2026-03-11 01:52:46] 2026-03-11 05:52:03,428 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/0
[2026-03-11 01:52:46] 2026-03-11 05:52:03,440 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | job 7049258845 has completed (purged errors)
[2026-03-11 01:52:46] 2026-03-11 05:52:03,442 | INFO     | overall cleanup function is called
[2026-03-11 01:52:46] 2026-03-11 05:52:04,447 | INFO     | --- collectZombieJob: --- 10, [610978]
[2026-03-11 01:52:46] 2026-03-11 05:52:04,447 | INFO     | zombie collector waiting for pid 610978
[2026-03-11 01:52:46] 2026-03-11 05:52:04,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 01:52:46] 2026-03-11 05:52:04,447 | INFO     | collected zombie processes
[2026-03-11 01:52:46] 2026-03-11 05:52:04,447 | INFO     | will attempt to kill all subprocesses of pid=610978
[2026-03-11 01:52:46] 2026-03-11 05:52:04,587 | INFO     | process IDs to be killed: [610978] (in reverse order)
[2026-03-11 01:52:46] 2026-03-11 05:52:04,624 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 01:52:46] 2026-03-11 05:52:04,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 01:52:46] 2026-03-11 05:52:04,628 | INFO     | did not find any defunct processes belonging to 610978
[2026-03-11 01:52:46] 2026-03-11 05:52:04,630 | INFO     | did not find any defunct processes belonging to 610978
[2026-03-11 01:52:46] 2026-03-11 05:52:04,631 | INFO     | ready for new job
[2026-03-11 01:52:46] 2026-03-11 05:52:04,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 01:52:46] 2026-03-11 05:52:04,632 | INFO     | **************************************
[2026-03-11 01:52:46] 2026-03-11 05:52:04,632 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-11 01:52:46] 2026-03-11 05:52:04,632 | INFO     | **************************************
[2026-03-11 01:52:46] 2026-03-11 05:52:04,632 | INFO     | 
[2026-03-11 01:52:46] 2026-03-11 05:52:04,633 | INFO     | architecture information:
[2026-03-11 01:52:46] 2026-03-11 05:52:04,634 | INFO     | executing command: cat /etc/os-release
[2026-03-11 01:52:46] 2026-03-11 05:52:04,648 | INFO     | cat /etc/os-release:
[2026-03-11 01:52:46] NAME="CentOS Linux"
[2026-03-11 01:52:46] VERSION="7 (Core)"
[2026-03-11 01:52:46] ID="centos"
[2026-03-11 01:52:46] ID_LIKE="rhel fedora"
[2026-03-11 01:52:46] VERSION_ID="7"
[2026-03-11 01:52:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 01:52:46] ANSI_COLOR="0;31"
[2026-03-11 01:52:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 01:52:46] HOME_URL="https://www.centos.org/"
[2026-03-11 01:52:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 01:52:46] 
[2026-03-11 01:52:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 01:52:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 01:52:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 01:52:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 01:52:46] 
[2026-03-11 01:52:46] 2026-03-11 05:52:04,648 | INFO     | **************************************
[2026-03-11 01:52:46] 2026-03-11 05:52:05,150 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/0
[2026-03-11 01:52:46] 2026-03-11 05:52:05,161 | INFO     | sufficient remaining disk space (411480096768 B)
[2026-03-11 01:52:46] 2026-03-11 05:52:05,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 01:52:46] 2026-03-11 05:52:05,161 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | INFO     | update_server=False
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 01:52:46] 2026-03-11 05:52:05,162 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 01:52:46] 2026-03-11 05:52:05,163 | INFO     | aborting loop
[2026-03-11 01:52:46] 2026-03-11 05:52:05,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 01:52:46] 2026-03-11 05:52:05,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 01:52:46] 2026-03-11 05:52:05,428 | INFO     | job.realtimelogging is not enabled
[2026-03-11 01:52:46] 2026-03-11 05:52:05,643 | INFO     | all payload control threads have been joined
[2026-03-11 01:52:46] 2026-03-11 05:52:05,805 | INFO     | all data control threads have been joined
[2026-03-11 01:52:46] 2026-03-11 05:52:05,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 01:52:46] 2026-03-11 05:52:06,167 | INFO     | [job] retrieve thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,168 | INFO     | [job] job monitor thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,168 | INFO     | [job] queue monitor thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,522 | INFO     | [payload] validate_post thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,544 | INFO     | all job control threads have been joined
[2026-03-11 01:52:46] 2026-03-11 05:52:06,648 | INFO     | [payload] control thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:06,810 | INFO     | [data] control thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,133 | INFO     | [job] validate thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,228 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,443 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,443 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,493 | INFO     | [data] copytool_in thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,549 | INFO     | [job] control thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,607 | INFO     | [payload] failed_post thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:07,973 | INFO     | [data] copytool_out thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:09,168 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 01:52:46] 2026-03-11 05:52:39,575 | INFO     | [monitor] cgroup control has ended
[2026-03-11 01:52:46] 2026-03-11 05:52:41,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126435928442688)>', '<ExcThread(monitor, started 126435289188096)>']
[2026-03-11 01:52:46] 2026-03-11 05:52:41,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 01:52:46] 2026-03-11 05:52:41,338 | INFO     | [monitor] control thread has ended
[2026-03-11 01:52:46] 2026-03-11 05:52:46,092 | INFO     | all workflow threads have been joined
[2026-03-11 01:52:46] 2026-03-11 05:52:46,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 01:52:46] 2026-03-11 05:52:46,092 | INFO     | traces error code: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:46,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 01:52:46] 2026-03-11 05:52:46,166 [wrapper] ==== pilot stdout END ====
[2026-03-11 01:52:46] 2026-03-11 05:52:46,168 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 01:52:46] 2026-03-11 05:52:46,169 [wrapper] pilotpid: 606424
[2026-03-11 01:52:46] 2026-03-11 05:52:46,172 [wrapper] Pilot exit status: 0
[2026-03-11 01:52:46] 2026-03-11 05:52:46,177 [wrapper] pandaids: 7049258845
[2026-03-11 01:52:46] 2026-03-11 05:52:46,199 [wrapper] cleanup supervisor_pilot  655690 606425
[2026-03-11 01:52:46] 2026-03-11 05:52:46,202 [wrapper] Test setup, not cleaning
[2026-03-11 01:52:46] 2026-03-11 05:52:46,204 [wrapper] apfmon messages muted
[2026-03-11 01:52:46] 2026-03-11 05:52:46,206 [wrapper] ==== wrapper stdout END ====
[2026-03-11 01:52:46] 2026-03-11 05:52:46,207 [wrapper] ==== wrapper stderr END ====
[2026-03-11 01:52:46]  *** Error codes and diagnostics ***
[2026-03-11 01:52:46]     "exeErrorCode": 0,
[2026-03-11 01:52:46]     "exeErrorDiag": "",
[2026-03-11 01:52:46]     "pilotErrorCode": 0,
[2026-03-11 01:52:46]     "pilotErrorDiag": "",
[2026-03-11 01:52:46]  *** Listing of results directory ***
[2026-03-11 01:52:46] total 418108
[2026-03-11 01:52:46] -rw-r--r-- 1 whitlerd whitlerd    585013 Mar 10 19:17 pilot3.tar.gz
[2026-03-11 01:52:46] -rwx------ 1 whitlerd whitlerd     36322 Mar 10 19:18 runpilot2-wrapper.sh
[2026-03-11 01:52:46] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar 10 19:19 queuedata.json
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar 10 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 01:52:46] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar 10 23:11 run_atlas
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar 10 23:11 job.xml
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 10 23:11 start_atlas.sh
[2026-03-11 01:52:46] drwxrwx--x 2 whitlerd whitlerd      4096 Mar 10 23:11 shared
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd    597530 Mar 10 23:11 input.tar.gz
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd 217873843 Mar 10 23:11 EVNT.48967008._000308.pool.root.1
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 10 23:11 boinc_setup_complete
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar 10 23:11 init_data.xml
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar 10 23:11 boinc_lockfile
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd      2561 Mar 10 23:11 pandaJob.out
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd   1006644 Mar 10 23:11 agis_schedconf.cvmfs.json
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd   1511578 Mar 10 23:11 agis_ddmendpoints.agis.ALL.json
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd       439 Mar 10 23:11 workernode_map.json
[2026-03-11 01:52:46] drwx------ 5 whitlerd whitlerd      4096 Mar 10 23:11 pilot3
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd 202845417 Mar 11 01:51 HITS.48967011._007814.pool.root.1
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar 11 01:51 boinc_task_state.xml
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd        95 Mar 11 01:51 pilot_heartbeat.json
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd      1028 Mar 11 01:51 memory_monitor_summary.json
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd    328862 Mar 11 01:52 log.48967011._007814.job.log.tgz.1
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd      6357 Mar 11 01:52 heartbeat.json
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar 11 01:52 wrapper_checkpoint.txt
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar 11 01:52 boinc_mmap_file
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd      4635 Mar 11 01:52 pilotlog.txt
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd   1413577 Mar 11 01:52 log.48967011._007814.job.log.1
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd       357 Mar 11 01:52 output.list
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar 11 01:52 runtime_log
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd   1761280 Mar 11 01:52 result.tar.gz
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd       658 Mar 11 01:52 yFTKDmXWLK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsXhLDmijFQPn.diag
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar 11 01:52 runtime_log.err
[2026-03-11 01:52:46] -rw-rw-r-- 1 whitlerd whitlerd     20910 Mar 11 01:52 stderr.txt
[2026-03-11 01:52:46] HITS file was successfully produced:
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd 202845417 Mar 11 01:51 shared/HITS.pool.root.1
[2026-03-11 01:52:46]  *** Contents of shared directory: ***
[2026-03-11 01:52:46] total 413188
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar 10 23:11 start_atlas.sh
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd    597530 Mar 10 23:11 input.tar.gz
[2026-03-11 01:52:46] -rw-r--r-- 2 whitlerd whitlerd 217873843 Mar 10 23:11 ATLAS.root_0
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd 202845417 Mar 11 01:51 HITS.pool.root.1
[2026-03-11 01:52:46] -rw------- 1 whitlerd whitlerd   1761280 Mar 11 01:52 result.tar.gz
01:52:47 (602624): run_atlas exited; CPU time 37753.780196
01:52:47 (602624): called boinc_finish(0)

</stderr_txt>
]]>

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