Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:27:33 (2867738): wrapper (7.7.26015): starting
22:27:33 (2867738): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 22:27:33] Arguments: --nthreads 4
[2026-03-12 22:27:33] Threads: 4
[2026-03-12 22:27:33] Checking for CVMFS
[2026-03-12 22:27:33] No cvmfs_config command found, will try listing directly
[2026-03-12 22:27:33] CVMFS is ok
[2026-03-12 22:27:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 22:27:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 22:27:33] Further information can be found at the LHC@home message board.
[2026-03-12 22:27:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 22:27:33] Checking for apptainer binary...
[2026-03-12 22:27:33] which: no apptainer in ((null))
[2026-03-12 22:27:33] apptainer is not installed, using version from CVMFS
[2026-03-12 22:27:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 22:27:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-12 22:27:33] apptainer works
[2026-03-12 22:27:33] Set ATHENA_PROC_NUMBER=4
[2026-03-12 22:27:33] Set ATHENA_CORE_NUMBER=4
[2026-03-12 22:27:33] Starting ATLAS job with PandaID=7049379100
[2026-03-12 22:27:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 02:08:01]  *** The last 200 lines of the pilot log: ***
[2026-03-13 02:08:01] 2026-03-13 01:05:36,624 | INFO     | preparing for final server update for job 7049379100 in state='finished'
[2026-03-13 02:08:01] 2026-03-13 01:05:36,625 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049379100/jobReport.json
[2026-03-13 02:08:01] 2026-03-13 01:05:36,629 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/0/workernode_map.json
[2026-03-13 02:08:01] 2026-03-13 01:05:36,630 | INFO     | this job has now completed (state=finished)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,630 | INFO     | log transfer has been attempted: DONE
[2026-03-13 02:08:01] 2026-03-13 01:05:36,630 | INFO     | job 7049379100 has finished - writing final server update
[2026-03-13 02:08:01] 2026-03-13 01:05:36,631 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_705621/.job.ad'
[2026-03-13 02:08:01] 2026-03-13 01:05:36,631 | INFO     | total number of processed events: 400 (read)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,649 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049379100/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,650 | INFO     | extracted standard info from prmon json
[2026-03-13 02:08:01] 2026-03-13 01:05:36,650 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 02:08:01] 2026-03-13 01:05:36,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 02:08:01] 2026-03-13 01:05:36,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 02:08:01] 2026-03-13 01:05:36,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 02:08:01] 2026-03-13 01:05:36,657 | INFO     | fitting pss+swap vs Time
[2026-03-13 02:08:01] 2026-03-13 01:05:36,658 | INFO     | sum of square deviations: 3038856977.5
[2026-03-13 02:08:01] 2026-03-13 01:05:36,659 | INFO     | sum of deviations: -46633761900.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,659 | INFO     | mean x: 1773357391.5
[2026-03-13 02:08:01] 2026-03-13 01:05:36,659 | INFO     | mean y: 2383871.953271028
[2026-03-13 02:08:01] 2026-03-13 01:05:36,660 | INFO     | intersect: 27216012868.356438
[2026-03-13 02:08:01] 2026-03-13 01:05:36,660 | INFO     | chi2: 1.6138598242835354
[2026-03-13 02:08:01] 2026-03-13 01:05:36,660 | INFO     | sum of square deviations: 2830787960.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | sum of deviations: -45220094525.00001
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | mean x: 1773357239.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | mean y: 2384908.263157895
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | intersect: 28330674807.508396
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | chi2: 1.6079152006874269
[2026-03-13 02:08:01] 2026-03-13 01:05:36,663 | INFO     | current chi2=1.6079152006874269 (change=0.3683481989365193 %)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,664 | INFO     | right removable region: 208
[2026-03-13 02:08:01] 2026-03-13 01:05:36,664 | INFO     | sum of square deviations: 2830787960.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,666 | INFO     | sum of deviations: -70184925916.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,666 | INFO     | mean x: 1773357544.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,666 | INFO     | mean y: 2400862.995215311
[2026-03-13 02:08:01] 2026-03-13 01:05:36,667 | INFO     | intersect: 43970006210.66658
[2026-03-13 02:08:01] 2026-03-13 01:05:36,667 | INFO     | chi2: 0.3201545124399303
[2026-03-13 02:08:01] 2026-03-13 01:05:36,667 | INFO     | current chi2=0.3201545124399303 (change=80.1621858588579 %)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,668 | INFO     | sum of square deviations: 2632440055.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,670 | INFO     | sum of deviations: -60954428272.499985
[2026-03-13 02:08:01] 2026-03-13 01:05:36,670 | INFO     | mean x: 1773357696.5
[2026-03-13 02:08:01] 2026-03-13 01:05:36,670 | INFO     | mean y: 2393760.838235294
[2026-03-13 02:08:01] 2026-03-13 01:05:36,670 | INFO     | intersect: 41064679037.75598
[2026-03-13 02:08:01] 2026-03-13 01:05:36,671 | INFO     | chi2: 0.3042790733191109
[2026-03-13 02:08:01] 2026-03-13 01:05:36,671 | INFO     | current chi2=0.3042790733191109 (change=4.958680419598354 %)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,671 | INFO     | left removable region: 20
[2026-03-13 02:08:01] 2026-03-13 01:05:36,671 | INFO     | sum of square deviations: 2060343747.0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | sum of deviations: -39077818200.5
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | mean x: 1773357818.5
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | mean y: 2377840.2819148935
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | intersect: 33637034453.61755
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | chi2: 0.22666886388043814
[2026-03-13 02:08:01] 2026-03-13 01:05:36,673 | INFO     | current memory leak: -18.97 B/s (using 188 data points, chi2=0.23)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,674 | INFO     | could have reported an average CPU frequency of 2471 MHz (11 samples)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,674 | INFO     | ..............................
[2026-03-13 02:08:01] 2026-03-13 01:05:36,674 | INFO     | . Timing measurements:
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . get job = 0 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . initial setup = 6 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . payload setup = 6 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . stage-in = 0 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . payload execution = 13041 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . stage-out = 1 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | . log creation = 0 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,675 | INFO     | ..............................
[2026-03-13 02:08:01] 2026-03-13 01:05:36,807 | INFO     | 
[2026-03-13 02:08:01] 2026-03-13 01:05:36,807 | INFO     | job summary report
[2026-03-13 02:08:01] 2026-03-13 01:05:36,807 | INFO     | --------------------------------------------------
[2026-03-13 02:08:01] 2026-03-13 01:05:36,807 | INFO     | PanDA job id: 7049379100
[2026-03-13 02:08:01] 2026-03-13 01:05:36,807 | INFO     | task id: 48967085
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | errors: (none)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | pilot state: finished 
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | transexitcode: 0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | exeerrorcode: 0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | exeerrordiag: 
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | exitcode: 0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | exitmsg: OK
[2026-03-13 02:08:01] 2026-03-13 01:05:36,808 | INFO     | cpuconsumptiontime: 49888 s
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | nevents: 400
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | neventsw: 0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | pid: 2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | pgrp: 2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | corecount: 4
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | event service: False
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | sizes: {0: 2279816, 1: 2280277, 11: 2280277, 13052: 2310274, 13054: 2319350, 13055: 2319488}
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | --------------------------------------------------
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | 
[2026-03-13 02:08:01] 2026-03-13 01:05:36,809 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-13 02:08:01] 2026-03-13 01:05:36,833 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,836 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 02:08:01] 2026-03-13 01:05:36,836 | INFO     | job 7049379100 has completed (purged errors)
[2026-03-13 02:08:01] 2026-03-13 01:05:36,836 | INFO     | overall cleanup function is called
[2026-03-13 02:08:01] 2026-03-13 01:05:37,154 | INFO     | PID=2871842 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 02:08:01] 2026-03-13 01:05:37,154 | INFO     | .. there are 10 such processes running
[2026-03-13 02:08:01] 2026-03-13 01:05:37,849 | INFO     | --- collectZombieJob: --- 10, [2876688]
[2026-03-13 02:08:01] 2026-03-13 01:05:37,849 | INFO     | zombie collector waiting for pid 2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:37,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 02:08:01] 2026-03-13 01:05:37,849 | INFO     | collected zombie processes
[2026-03-13 02:08:01] 2026-03-13 01:05:37,849 | INFO     | will attempt to kill all subprocesses of pid=2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:38,256 | INFO     | process IDs to be killed: [2876688] (in reverse order)
[2026-03-13 02:08:01] 2026-03-13 01:05:38,398 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 02:08:01] 2026-03-13 01:05:38,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 02:08:01] 2026-03-13 01:05:38,412 | INFO     | did not find any defunct processes belonging to 2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:38,425 | INFO     | did not find any defunct processes belonging to 2876688
[2026-03-13 02:08:01] 2026-03-13 01:05:38,425 | INFO     | ready for new job
[2026-03-13 02:08:01] 2026-03-13 01:05:38,425 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 02:08:01] 2026-03-13 01:05:38,428 | INFO     | **************************************
[2026-03-13 02:08:01] 2026-03-13 01:05:38,428 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-13 02:08:01] 2026-03-13 01:05:38,428 | INFO     | **************************************
[2026-03-13 02:08:01] 2026-03-13 01:05:38,428 | INFO     | 
[2026-03-13 02:08:01] 2026-03-13 01:05:38,432 | INFO     | architecture information:
[2026-03-13 02:08:01] 2026-03-13 01:05:38,433 | INFO     | executing command: cat /etc/os-release
[2026-03-13 02:08:01] 2026-03-13 01:05:38,451 | INFO     | cat /etc/os-release:
[2026-03-13 02:08:01] NAME="CentOS Linux"
[2026-03-13 02:08:01] VERSION="7 (Core)"
[2026-03-13 02:08:01] ID="centos"
[2026-03-13 02:08:01] ID_LIKE="rhel fedora"
[2026-03-13 02:08:01] VERSION_ID="7"
[2026-03-13 02:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 02:08:01] ANSI_COLOR="0;31"
[2026-03-13 02:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 02:08:01] HOME_URL="https://www.centos.org/"
[2026-03-13 02:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 02:08:01] 
[2026-03-13 02:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 02:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 02:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 02:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 02:08:01] 
[2026-03-13 02:08:01] 2026-03-13 01:05:38,451 | INFO     | **************************************
[2026-03-13 02:08:01] 2026-03-13 01:05:38,954 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-13 02:08:01] 2026-03-13 01:05:38,972 | INFO     | sufficient remaining disk space (24731713536 B)
[2026-03-13 02:08:01] 2026-03-13 01:05:38,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 02:08:01] 2026-03-13 01:05:38,973 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 02:08:01] 2026-03-13 01:05:38,973 | INFO     | update_server=False
[2026-03-13 02:08:01] 2026-03-13 01:05:38,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 02:08:01] 2026-03-13 01:05:38,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 02:08:01] 2026-03-13 01:05:38,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 02:08:01] 2026-03-13 01:05:38,974 | INFO     | aborting loop
[2026-03-13 02:08:01] 2026-03-13 01:05:39,005 | INFO     | all job control threads have been joined
[2026-03-13 02:08:01] 2026-03-13 01:05:39,387 | INFO     | all data control threads have been joined
[2026-03-13 02:08:01] 2026-03-13 01:05:39,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 02:08:01] 2026-03-13 01:05:39,563 | INFO     | all payload control threads have been joined
[2026-03-13 02:08:01] 2026-03-13 01:05:39,979 | INFO     | [job] retrieve thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:39,980 | INFO     | [job] job monitor thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,010 | INFO     | [job] control thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,037 | INFO     | [data] copytool_in thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,073 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,242 | INFO     | [payload] failed_post thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,392 | INFO     | [data] control thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,569 | INFO     | [payload] control thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,599 | INFO     | [job] validate thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,771 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:40,771 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:41,118 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:41,239 | INFO     | [payload] validate_post thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:41,529 | INFO     | [data] copytool_out thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:41,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 02:08:01] 2026-03-13 01:05:42,814 | INFO     | [job] queue monitor thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:05:42,976 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 02:08:01] 2026-03-13 01:06:09,746 | INFO     | PID=2871842 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-13 02:08:01] 2026-03-13 01:06:09,746 | INFO     | .. there are 10 such processes running
[2026-03-13 02:08:01] 2026-03-13 01:06:09,748 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 02:08:01] 2026-03-13 01:06:09,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 02:08:01] 2026-03-13 01:06:09,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 02:08:01] 2026-03-13 01:06:12,281 | INFO     | [monitor] cgroup control has ended
[2026-03-13 02:08:01] 2026-03-13 01:06:13,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23337331840832)>', '<ExcThread(monitor, started 23337087796992)>']
[2026-03-13 02:08:01] 2026-03-13 01:06:13,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 02:08:01] 2026-03-13 01:06:13,768 | INFO     | [monitor] control thread has ended
[2026-03-13 02:08:01] 2026-03-13 01:06:18,574 | INFO     | all workflow threads have been joined
[2026-03-13 02:08:01] 2026-03-13 01:06:18,574 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 02:08:01] 2026-03-13 01:06:18,575 | INFO     | traces error code: 0
[2026-03-13 02:08:01] 2026-03-13 01:06:18,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 02:08:01] 2026-03-13 01:06:18,768 [wrapper] ==== pilot stdout END ====
[2026-03-13 02:08:01] 2026-03-13 01:06:18,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 02:08:01] 2026-03-13 01:06:18,775 [wrapper] pilotpid: 2871842
[2026-03-13 02:08:01] 2026-03-13 01:06:18,778 [wrapper] Pilot exit status: 0
[2026-03-13 02:08:01] 2026-03-13 01:06:18,791 [wrapper] pandaids: 7049379100
[2026-03-13 02:08:01] 2026-03-13 01:06:18,874 [wrapper] cleanup supervisor_pilot 3071664 2871843
[2026-03-13 02:08:01] 2026-03-13 01:06:18,878 [wrapper] Test setup, not cleaning
[2026-03-13 02:08:01] 2026-03-13 01:06:18,881 [wrapper] apfmon messages muted
[2026-03-13 02:08:01] 2026-03-13 01:06:18,885 [wrapper] ==== wrapper stdout END ====
[2026-03-13 02:08:01] 2026-03-13 01:06:18,888 [wrapper] ==== wrapper stderr END ====
[2026-03-13 02:08:01]  *** Error codes and diagnostics ***
[2026-03-13 02:08:01]     "exeErrorCode": 0,
[2026-03-13 02:08:01]     "exeErrorDiag": "",
[2026-03-13 02:08:01]     "pilotErrorCode": 0,
[2026-03-13 02:08:01]     "pilotErrorDiag": "",
[2026-03-13 02:08:01]  *** Listing of results directory ***
[2026-03-13 02:08:01] total 405988
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc    585013 Mar 11 03:46 pilot3.tar.gz
[2026-03-13 02:08:01] -rwx------. 1 boinc boinc     36322 Mar 11 03:48 runpilot2-wrapper.sh
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc      5111 Mar 11 03:49 queuedata.json
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc       100 Mar 12 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 02:08:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 22:27 run_atlas
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc       105 Mar 12 22:27 job.xml
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc 210716442 Mar 12 22:27 EVNT.48967083._000225.pool.root.1
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc      6563 Mar 12 22:27 init_data.xml
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc     15845 Mar 12 22:27 start_atlas.sh
[2026-03-13 02:08:01] drwxrwx--x. 2 boinc boinc      4096 Mar 12 22:27 shared
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc    597517 Mar 12 22:27 input.tar.gz
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc         0 Mar 12 22:27 boinc_lockfile
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc      2561 Mar 12 22:27 pandaJob.out
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc   1006514 Mar 12 22:27 agis_schedconf.cvmfs.json
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc       451 Mar 12 22:27 workernode_map.json
[2026-03-13 02:08:01] drwx------. 5 boinc boinc      4096 Mar 12 22:27 pilot3
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc 196623018 Mar 13 02:04 HITS.48967085._005618.pool.root.1
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc       528 Mar 13 02:04 boinc_task_state.xml
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc      1037 Mar 13 02:05 memory_monitor_summary.json
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc   1511578 Mar 13 02:05 agis_ddmendpoints.agis.ALL.json
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc    392451 Mar 13 02:05 log.48967085._005618.job.log.tgz.1
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc      6421 Mar 13 02:05 heartbeat.json
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc        95 Mar 13 02:06 pilot_heartbeat.json
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc      4829 Mar 13 02:06 pilotlog.txt
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc   1836651 Mar 13 02:06 log.48967085._005618.job.log.1
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc       357 Mar 13 02:06 output.list
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc       620 Mar 13 02:06 runtime_log
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc   2242560 Mar 13 02:06 result.tar.gz
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc      9205 Mar 13 02:06 runtime_log.err
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc       666 Mar 13 02:06 bpXLDmHnOK9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmG7hLDm8gdpcn.diag
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc        27 Mar 13 02:07 wrapper_checkpoint.txt
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc      8192 Mar 13 02:08 boinc_mmap_file
[2026-03-13 02:08:01] -rw-r--r--. 1 boinc boinc     21216 Mar 13 02:08 stderr.txt
[2026-03-13 02:08:01] HITS file was successfully produced:
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc 196623018 Mar 13 02:04 shared/HITS.pool.root.1
[2026-03-13 02:08:01]  *** Contents of shared directory: ***
[2026-03-13 02:08:01] total 400596
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc 210716442 Mar 12 22:27 ATLAS.root_0
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc     15845 Mar 12 22:27 start_atlas.sh
[2026-03-13 02:08:01] -rw-r--r--. 2 boinc boinc    597517 Mar 12 22:27 input.tar.gz
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc 196623018 Mar 13 02:04 HITS.pool.root.1
[2026-03-13 02:08:01] -rw-------. 1 boinc boinc   2242560 Mar 13 02:06 result.tar.gz
02:08:03 (2867738): run_atlas exited; CPU time 50488.994630
02:08:03 (2867738): called boinc_finish(0)

</stderr_txt>
]]>

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