Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:38 (1696877): wrapper (7.7.26015): starting
06:56:38 (1696877): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 06:56:38] Arguments: --nthreads 4
[2026-03-12 06:56:38] Threads: 4
[2026-03-12 06:56:38] Checking for CVMFS
[2026-03-12 06:56:38] No cvmfs_config command found, will try listing directly
[2026-03-12 06:56:38] CVMFS is ok
[2026-03-12 06:56:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 06:56:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 06:56:38] Further information can be found at the LHC@home message board.
[2026-03-12 06:56:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 06:56:38] Checking for apptainer binary...
[2026-03-12 06:56:38] which: no apptainer in ((null))
[2026-03-12 06:56:38] apptainer is not installed, using version from CVMFS
[2026-03-12 06:56:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 06:56:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-03-12 06:56:38] apptainer works
[2026-03-12 06:56:38] Set ATHENA_PROC_NUMBER=4
[2026-03-12 06:56:38] Set ATHENA_CORE_NUMBER=4
[2026-03-12 06:56:38] Starting ATLAS job with PandaID=7049241226
[2026-03-12 06:56:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 10:56:36]  *** The last 200 lines of the pilot log: ***
[2026-03-12 10:56:36] 2026-03-12 09:53:25,745 | INFO     | extracted standard memory fields from prmon json
[2026-03-12 10:56:36] 2026-03-12 09:53:25,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-12 10:56:36] 2026-03-12 09:53:25,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-12 10:56:36] 2026-03-12 09:53:25,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 10:56:36] 2026-03-12 09:53:25,749 | INFO     | fitting pss+swap vs Time
[2026-03-12 10:56:36] 2026-03-12 09:53:25,750 | INFO     | sum of square deviations: 3922276332.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,752 | INFO     | sum of deviations: 17435296757.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,752 | INFO     | mean x: 1773302120.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,752 | INFO     | mean y: 2304337.9227467813
[2026-03-12 10:56:36] 2026-03-12 09:53:25,752 | INFO     | intersect: -7880375535.948319
[2026-03-12 10:56:36] 2026-03-12 09:53:25,752 | INFO     | chi2: 2.1631765851949054
[2026-03-12 10:56:36] 2026-03-12 09:53:25,753 | INFO     | sum of square deviations: 3675146117.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,754 | INFO     | sum of deviations: 31338750610.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,754 | INFO     | mean x: 1773301967.5
[2026-03-12 10:56:36] 2026-03-12 09:53:25,754 | INFO     | mean y: 2312761.01754386
[2026-03-12 10:56:36] 2026-03-12 09:53:25,755 | INFO     | intersect: -15119009316.121744
[2026-03-12 10:56:36] 2026-03-12 09:53:25,755 | INFO     | chi2: 1.3676476565222644
[2026-03-12 10:56:36] 2026-03-12 09:53:25,755 | INFO     | current chi2=1.3676476565222644 (change=36.77595875054106 %)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,755 | INFO     | sum of square deviations: 3438620752.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | sum of deviations: 30444932798.999996
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | mean x: 1773301815.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | mean y: 2312184.7892376683
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | intersect: -15698184753.879768
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | chi2: 1.3682782072782247
[2026-03-12 10:56:36] 2026-03-12 09:53:25,757 | INFO     | current chi2=1.3682782072782247 (change=-0.04610476630828321 %)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,758 | INFO     | right removable region: 222
[2026-03-12 10:56:36] 2026-03-12 09:53:25,758 | INFO     | sum of square deviations: 3675146117.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,759 | INFO     | sum of deviations: -12923538018.999998
[2026-03-12 10:56:36] 2026-03-12 09:53:25,759 | INFO     | mean x: 1773302272.5
[2026-03-12 10:56:36] 2026-03-12 09:53:25,760 | INFO     | mean y: 2322868.0877192984
[2026-03-12 10:56:36] 2026-03-12 09:53:25,760 | INFO     | intersect: 6238085640.028915
[2026-03-12 10:56:36] 2026-03-12 09:53:25,760 | INFO     | chi2: 0.8284665434710005
[2026-03-12 10:56:36] 2026-03-12 09:53:25,760 | INFO     | current chi2=0.8284665434710005 (change=61.70139094787057 %)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,760 | INFO     | sum of square deviations: 3438620752.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | sum of deviations: -12098039659.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | mean x: 1773302425.0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | mean y: 2322319.399103139
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | intersect: 6241301436.992374
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | chi2: 0.8246231397475049
[2026-03-12 10:56:36] 2026-03-12 09:53:25,762 | INFO     | current chi2=0.8246231397475049 (change=0.4639177953273738 %)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,763 | INFO     | left removable region: 20
[2026-03-12 10:56:36] 2026-03-12 09:53:25,763 | INFO     | sum of square deviations: 2555770710.5
[2026-03-12 10:56:36] 2026-03-12 09:53:25,764 | INFO     | sum of deviations: 5132627565.500002
[2026-03-12 10:56:36] 2026-03-12 09:53:25,764 | INFO     | mean x: 1773302394.5
[2026-03-12 10:56:36] 2026-03-12 09:53:25,764 | INFO     | mean y: 2328655.9752475247
[2026-03-12 10:56:36] 2026-03-12 09:53:25,764 | INFO     | intersect: -3558906596.696242
[2026-03-12 10:56:36] 2026-03-12 09:53:25,765 | INFO     | chi2: 0.0005495648137939854
[2026-03-12 10:56:36] 2026-03-12 09:53:25,765 | INFO     | current memory leak: 2.01 B/s (using 202 data points, chi2=0.00)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,765 | INFO     | could have reported an average CPU frequency of 2467 MHz (11 samples)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | ..............................
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . Timing measurements:
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . get job = 0 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . initial setup = 9 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . payload setup = 9 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . stage-in = 0 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . payload execution = 14164 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . stage-out = 1 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | . log creation = 0 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,766 | INFO     | ..............................
[2026-03-12 10:56:36] 2026-03-12 09:53:25,856 | INFO     | 
[2026-03-12 10:56:36] 2026-03-12 09:53:25,856 | INFO     | job summary report
[2026-03-12 10:56:36] 2026-03-12 09:53:25,856 | INFO     | --------------------------------------------------
[2026-03-12 10:56:36] 2026-03-12 09:53:25,856 | INFO     | PanDA job id: 7049241226
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | task id: 48967085
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | errors: (none)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | pilot state: finished 
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | transexitcode: 0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | exeerrorcode: 0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | exeerrordiag: 
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | exitcode: 0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | exitmsg: OK
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | cpuconsumptiontime: 52815 s
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | nevents: 400
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | neventsw: 0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | pid: 1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:25,857 | INFO     | pgrp: 1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | corecount: 4
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | event service: False
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | sizes: {0: 2279817, 1: 2280278, 14178: 2311059, 14180: 2320079, 14182: 2320329}
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | --------------------------------------------------
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | 
[2026-03-12 10:56:36] 2026-03-12 09:53:25,858 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/0
[2026-03-12 10:56:36] 2026-03-12 09:53:25,881 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 10:56:36] 2026-03-12 09:53:25,883 | INFO     | job 7049241226 has completed (purged errors)
[2026-03-12 10:56:36] 2026-03-12 09:53:25,884 | INFO     | overall cleanup function is called
[2026-03-12 10:56:36] 2026-03-12 09:53:26,891 | INFO     | --- collectZombieJob: --- 10, [1705968]
[2026-03-12 10:56:36] 2026-03-12 09:53:26,891 | INFO     | zombie collector waiting for pid 1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:26,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 10:56:36] 2026-03-12 09:53:26,891 | INFO     | collected zombie processes
[2026-03-12 10:56:36] 2026-03-12 09:53:26,891 | INFO     | will attempt to kill all subprocesses of pid=1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:27,284 | INFO     | process IDs to be killed: [1705968] (in reverse order)
[2026-03-12 10:56:36] 2026-03-12 09:53:27,410 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 10:56:36] 2026-03-12 09:53:27,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 10:56:36] 2026-03-12 09:53:27,423 | INFO     | did not find any defunct processes belonging to 1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:27,434 | INFO     | did not find any defunct processes belonging to 1705968
[2026-03-12 10:56:36] 2026-03-12 09:53:27,435 | INFO     | ready for new job
[2026-03-12 10:56:36] 2026-03-12 09:53:27,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 10:56:36] 2026-03-12 09:53:27,438 | INFO     | **************************************
[2026-03-12 10:56:36] 2026-03-12 09:53:27,438 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 10:56:36] 2026-03-12 09:53:27,438 | INFO     | **************************************
[2026-03-12 10:56:36] 2026-03-12 09:53:27,438 | INFO     | 
[2026-03-12 10:56:36] 2026-03-12 09:53:27,442 | INFO     | architecture information:
[2026-03-12 10:56:36] 2026-03-12 09:53:27,442 | INFO     | executing command: cat /etc/os-release
[2026-03-12 10:56:36] 2026-03-12 09:53:27,460 | INFO     | cat /etc/os-release:
[2026-03-12 10:56:36] NAME="CentOS Linux"
[2026-03-12 10:56:36] VERSION="7 (Core)"
[2026-03-12 10:56:36] ID="centos"
[2026-03-12 10:56:36] ID_LIKE="rhel fedora"
[2026-03-12 10:56:36] VERSION_ID="7"
[2026-03-12 10:56:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 10:56:36] ANSI_COLOR="0;31"
[2026-03-12 10:56:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 10:56:36] HOME_URL="https://www.centos.org/"
[2026-03-12 10:56:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 10:56:36] 
[2026-03-12 10:56:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 10:56:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 10:56:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 10:56:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 10:56:36] 
[2026-03-12 10:56:36] 2026-03-12 09:53:27,461 | INFO     | **************************************
[2026-03-12 10:56:36] 2026-03-12 09:53:27,963 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/0
[2026-03-12 10:56:36] 2026-03-12 09:53:27,982 | INFO     | sufficient remaining disk space (28395438080 B)
[2026-03-12 10:56:36] 2026-03-12 09:53:27,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 10:56:36] 2026-03-12 09:53:27,983 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 10:56:36] 2026-03-12 09:53:27,983 | INFO     | update_server=False
[2026-03-12 10:56:36] 2026-03-12 09:53:27,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 10:56:36] 2026-03-12 09:53:27,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 10:56:36] 2026-03-12 09:53:28,417 | INFO     | all job control threads have been joined
[2026-03-12 10:56:36] 2026-03-12 09:53:28,788 | INFO     | all payload control threads have been joined
[2026-03-12 10:56:36] 2026-03-12 09:53:28,853 | WARNING  | process 1705968 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 10:56:36] 2026-03-12 09:53:28,902 | INFO     | all data control threads have been joined
[2026-03-12 10:56:36] 2026-03-12 09:53:28,988 | INFO     | [job] retrieve thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,146 | INFO     | using path: /var/lib/boinc/var/slot56/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 10:56:36] 2026-03-12 09:53:29,155 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 10:56:36] 2026-03-12 09:53:29,422 | INFO     | [job] control thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,525 | INFO     | number of running child processes to parent process 1705968: 1
[2026-03-12 10:56:36] 2026-03-12 09:53:29,525 | INFO     | maximum number of monitored processes: 6
[2026-03-12 10:56:36] 2026-03-12 09:53:29,525 | INFO     | aborting job monitoring since job object (job id=7049241226) has expired
[2026-03-12 10:56:36] 2026-03-12 09:53:29,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:56:36] 2026-03-12 09:53:29,526 | INFO     | will abort loop
[2026-03-12 10:56:36] 2026-03-12 09:53:29,569 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,575 | INFO     | [payload] validate_post thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,754 | INFO     | [job] validate thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,776 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,778 | INFO     | [data] copytool_in thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,796 | INFO     | [payload] control thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:29,907 | INFO     | [data] control thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:30,321 | INFO     | [payload] failed_post thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:30,531 | INFO     | [job] job monitor thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:30,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 10:56:36] 2026-03-12 09:53:31,413 | INFO     | [data] copytool_out thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:31,867 | INFO     | [job] queue monitor thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:31,989 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:38,243 | INFO     | job.realtimelogging is not enabled
[2026-03-12 10:56:36] 2026-03-12 09:53:39,248 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 10:56:36] 2026-03-12 09:53:58,811 | INFO     | PID=1701119 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 10:56:36] 2026-03-12 09:53:58,811 | INFO     | .. there are 11 such processes running
[2026-03-12 10:56:36] 2026-03-12 09:53:58,811 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 10:56:36] 2026-03-12 09:53:58,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 10:56:36] 2026-03-12 09:53:58,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 10:56:36] 2026-03-12 09:54:26,279 | INFO     | [monitor] cgroup control has ended
[2026-03-12 10:56:36] 2026-03-12 09:54:26,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23006436804416)>', '<ExcThread(monitor, started 23006201267968)>']
[2026-03-12 10:56:36] 2026-03-12 09:54:26,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 10:56:36] 2026-03-12 09:54:26,934 | INFO     | [monitor] control thread has ended
[2026-03-12 10:56:36] 2026-03-12 09:54:31,578 | INFO     | all workflow threads have been joined
[2026-03-12 10:56:36] 2026-03-12 09:54:31,578 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 10:56:36] 2026-03-12 09:54:31,578 | INFO     | traces error code: 0
[2026-03-12 10:56:36] 2026-03-12 09:54:31,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 10:56:36] 2026-03-12 09:54:31,737 [wrapper] ==== pilot stdout END ====
[2026-03-12 10:56:36] 2026-03-12 09:54:31,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 10:56:36] 2026-03-12 09:54:31,743 [wrapper] pilotpid: 1701119
[2026-03-12 10:56:36] 2026-03-12 09:54:31,747 [wrapper] Pilot exit status: 0
[2026-03-12 10:56:36] 2026-03-12 09:54:31,758 [wrapper] pandaids: 7049241226
[2026-03-12 10:56:36] 2026-03-12 09:54:31,849 [wrapper] cleanup supervisor_pilot 1995295 1701120
[2026-03-12 10:56:36] 2026-03-12 09:54:31,852 [wrapper] Test setup, not cleaning
[2026-03-12 10:56:36] 2026-03-12 09:54:31,856 [wrapper] apfmon messages muted
[2026-03-12 10:56:36] 2026-03-12 09:54:31,859 [wrapper] ==== wrapper stdout END ====
[2026-03-12 10:56:36] 2026-03-12 09:54:31,862 [wrapper] ==== wrapper stderr END ====
[2026-03-12 10:56:36]  *** Error codes and diagnostics ***
[2026-03-12 10:56:36]     "exeErrorCode": 0,
[2026-03-12 10:56:36]     "exeErrorDiag": "",
[2026-03-12 10:56:36]     "pilotErrorCode": 0,
[2026-03-12 10:56:36]     "pilotErrorDiag": "",
[2026-03-12 10:56:36]  *** Listing of results directory ***
[2026-03-12 10:56:36] total 407944
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc      5111 Mar 10 23:35 queuedata.json
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc    585013 Mar 10 23:35 pilot3.tar.gz
[2026-03-12 10:56:36] -rwx------. 1 boinc boinc     36322 Mar 10 23:35 runpilot2-wrapper.sh
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc       100 Mar 12 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 10:56:36] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 06:56 run_atlas
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc       105 Mar 12 06:56 job.xml
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc      6563 Mar 12 06:56 init_data.xml
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc 212456860 Mar 12 06:56 EVNT.48967083._000130.pool.root.1
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc     15845 Mar 12 06:56 start_atlas.sh
[2026-03-12 10:56:36] drwxrwx--x. 2 boinc boinc      4096 Mar 12 06:56 shared
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc    597515 Mar 12 06:56 input.tar.gz
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc         0 Mar 12 06:56 boinc_lockfile
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc      2562 Mar 12 06:56 pandaJob.out
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc   1006243 Mar 12 06:56 agis_schedconf.cvmfs.json
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc       447 Mar 12 06:57 workernode_map.json
[2026-03-12 10:56:36] drwx------. 5 boinc boinc      4096 Mar 12 06:57 pilot3
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc 196560190 Mar 12 10:52 HITS.48967085._003229.pool.root.1
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc       528 Mar 12 10:52 boinc_task_state.xml
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc      1034 Mar 12 10:53 memory_monitor_summary.json
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc        95 Mar 12 10:53 pilot_heartbeat.json
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc   1511578 Mar 12 10:53 agis_ddmendpoints.agis.ALL.json
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc    391816 Mar 12 10:53 log.48967085._003229.job.log.tgz.1
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc      6394 Mar 12 10:53 heartbeat.json
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc      5433 Mar 12 10:54 pilotlog.txt
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc   1996241 Mar 12 10:54 log.48967085._003229.job.log.1
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc       357 Mar 12 10:54 output.list
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc       620 Mar 12 10:54 runtime_log
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc   2406400 Mar 12 10:54 result.tar.gz
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc      9205 Mar 12 10:54 runtime_log.err
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc       665 Mar 12 10:54 MUuNDmjqKK9n9Rq4apOajLDm4fhM0noT9bVooX4SDmydeLDmDRgjVm.diag
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc      8192 Mar 12 10:56 boinc_mmap_file
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc        26 Mar 12 10:56 wrapper_checkpoint.txt
[2026-03-12 10:56:36] -rw-r--r--. 1 boinc boinc     20836 Mar 12 10:56 stderr.txt
[2026-03-12 10:56:36] HITS file was successfully produced:
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc 196560190 Mar 12 10:52 shared/HITS.pool.root.1
[2026-03-12 10:56:36]  *** Contents of shared directory: ***
[2026-03-12 10:56:36] total 402396
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc 212456860 Mar 12 06:56 ATLAS.root_0
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc     15845 Mar 12 06:56 start_atlas.sh
[2026-03-12 10:56:36] -rw-r--r--. 2 boinc boinc    597515 Mar 12 06:56 input.tar.gz
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc 196560190 Mar 12 10:52 HITS.pool.root.1
[2026-03-12 10:56:36] -rw-------. 1 boinc boinc   2406400 Mar 12 10:54 result.tar.gz
10:56:38 (1696877): run_atlas exited; CPU time 53428.252896
10:56:38 (1696877): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN