Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:40:12 (395780): wrapper (7.7.26015): starting
04:40:12 (395780): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 04:40:12] Arguments: --nthreads 12
[2026-03-11 04:40:12] Threads: 12
[2026-03-11 04:40:12] Checking for CVMFS
[2026-03-11 04:40:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 04:40:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 04:40:12] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 04:40:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 04:40:12] 2.11.0.0 3995929 132 74736 157142 3 188 3666359 6144000 12102 130560 0 1473957 99.998 8276 835 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-11 04:40:12] CVMFS is ok
[2026-03-11 04:40:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 04:40:12] Checking for apptainer binary...
[2026-03-11 04:40:12] apptainer is not installed, using version from CVMFS
[2026-03-11 04:40:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 04:40:12] radiat0r
[2026-03-11 04:40:12] apptainer works
[2026-03-11 04:40:12] Set ATHENA_PROC_NUMBER=12
[2026-03-11 04:40:12] Set ATHENA_CORE_NUMBER=12
[2026-03-11 04:40:12] Starting ATLAS job with PandaID=7036125942
[2026-03-11 04:40:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 05:19:37]  *** The last 200 lines of the pilot log: ***
[2026-03-11 05:19:37]  filetype=log
[2026-03-11 05:19:37]  guid=ac95d720-a0b0-4a6e-aec3-2c763c7e5c53
[2026-03-11 05:19:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 05:19:37]  is_altstaged=None
[2026-03-11 05:19:37]  is_tar=False
[2026-03-11 05:19:37]  lfn=log.48838447._003911.job.log.tgz.1
[2026-03-11 05:19:37]  mtime=0
[2026-03-11 05:19:37]  protocol_id=None
[2026-03-11 05:19:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 05:19:37]  replicas=None
[2026-03-11 05:19:37]  scope=mc23_13p6TeV
[2026-03-11 05:19:37]  status=None
[2026-03-11 05:19:37]  status_code=0
[2026-03-11 05:19:37]  storage_token=
[2026-03-11 05:19:37]  surl=/var/lib/boinc/slots/10/PanDA_Pilot-7036125942/log.48838447._003911.job.log.tgz.1
[2026-03-11 05:19:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/b4/log.48838447._003911.job.log.tgz.1
[2026-03-11 05:19:37]  workdir=None
[2026-03-11 05:19:37] ]
[2026-03-11 05:19:37] 2026-03-11 05:18:37,578 | INFO     | transferring file log.48838447._003911.job.log.tgz.1 from /var/lib/boinc/slots/10/PanDA_Pilot-7036125942/log.48838447._003911.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-11 05:19:37] 2026-03-11 05:18:37,578 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/10/PanDA_Pilot-7036125942/log.48838447._003911.job.log.tgz.1 /var/lib/boinc/slots/10/log.48838447._003911.j
[2026-03-11 05:19:37] 2026-03-11 05:18:37,603 | INFO     | adding to output.list: log.48838447._003911.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/b4/log.48838447._003911.job.log.tg
[2026-03-11 05:19:37] 2026-03-11 05:18:37,604 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 05:19:37] 2026-03-11 05:18:37,604 | INFO     | summary of transferred files:
[2026-03-11 05:19:37] 2026-03-11 05:18:37,604 | INFO     |  -- lfn=log.48838447._003911.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 05:19:37] 2026-03-11 05:18:37,604 | INFO     | stage-out finished correctly
[2026-03-11 05:19:37] 2026-03-11 05:18:39,143 | INFO     | time since job start (2289s) is within the limit (349056.0s)
[2026-03-11 05:19:37] 2026-03-11 05:18:39,397 | INFO     | monitor loop #171: job 0:7036125942 is in state 'finished'
[2026-03-11 05:19:37] 2026-03-11 05:18:39,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-11 05:19:37] 2026-03-11 05:18:39,507 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 05:19:37] 2026-03-11 05:18:39,605 | INFO     | job 7036125942 has state=finished
[2026-03-11 05:19:37] 2026-03-11 05:18:39,605 | INFO     | preparing for final server update for job 7036125942 in state='finished'
[2026-03-11 05:19:37] 2026-03-11 05:18:40,127 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,127 | INFO     | reading metadata from: /var/lib/boinc/slots/10/PanDA_Pilot-7036125942/jobReport.json
[2026-03-11 05:19:37] 2026-03-11 05:18:40,129 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/10/workernode_map.json
[2026-03-11 05:19:37] 2026-03-11 05:18:40,129 | INFO     | this job has now completed (state=finished)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,130 | INFO     | log transfer has been attempted: DONE
[2026-03-11 05:19:37] 2026-03-11 05:18:40,130 | INFO     | job 7036125942 has finished - writing final server update
[2026-03-11 05:19:37] 2026-03-11 05:18:40,130 | INFO     | total number of processed events: 400 (read)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,195 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7036125942/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,195 | INFO     | extracted standard info from prmon json
[2026-03-11 05:19:37] 2026-03-11 05:18:40,195 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 05:19:37] 2026-03-11 05:18:40,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 05:19:37] 2026-03-11 05:18:40,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 05:19:37] 2026-03-11 05:18:40,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 05:19:37] 2026-03-11 05:18:40,196 | INFO     | fitting pss+swap vs Time
[2026-03-11 05:19:37] 2026-03-11 05:18:40,196 | INFO     | sum of square deviations: 9228080.0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | sum of deviations: -165610303.0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | mean x: 1773205274.0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | mean y: 2773924.290322581
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | intersect: 31825326688.065453
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | chi2: 0.004008428494585678
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | current memory leak: -17.95 B/s (using 31 data points, chi2=0.00)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | could have reported an average CPU frequency of 2214 MHz (5 samples)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | ..............................
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . Timing measurements:
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . get job = 0 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . initial setup = 6 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . payload setup = 7 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . stage-in = 0 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . payload execution = 2265 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,197 | INFO     | . stage-out = 0 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,198 | INFO     | . log creation = 0 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,198 | INFO     | ..............................
[2026-03-11 05:19:37] 2026-03-11 05:18:40,251 | INFO     | 
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | job summary report
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | --------------------------------------------------
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | PanDA job id: 7036125942
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | task id: 48838447
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | errors: (none)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | pilot state: finished 
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | transexitcode: 0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,252 | INFO     | exeerrorcode: 0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | exeerrordiag: 
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | exitcode: 0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | exitmsg: OK
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | cpuconsumptiontime: 23716 s
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | nevents: 400
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | neventsw: 0
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | pid: 421828
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | pgrp: 421828
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | corecount: 12
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | event service: False
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | sizes: {0: 2279757, 1: 2280274, 12: 2280274, 2275: 2305405, 2276: 2314405, 2278: 2314461, 2279: 2314815}
[2026-03-11 05:19:37] 2026-03-11 05:18:40,253 | INFO     | --------------------------------------------------
[2026-03-11 05:19:37] 2026-03-11 05:18:40,254 | INFO     | 
[2026-03-11 05:19:37] 2026-03-11 05:18:40,254 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-11 05:19:37] 2026-03-11 05:18:40,295 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,299 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,299 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 05:19:37] 2026-03-11 05:18:40,299 | INFO     | job 7036125942 has completed (purged errors)
[2026-03-11 05:19:37] 2026-03-11 05:18:40,299 | INFO     | overall cleanup function is called
[2026-03-11 05:19:37] 2026-03-11 05:18:41,310 | INFO     | --- collectZombieJob: --- 10, [421828]
[2026-03-11 05:19:37] 2026-03-11 05:18:41,310 | INFO     | zombie collector waiting for pid 421828
[2026-03-11 05:19:37] 2026-03-11 05:18:41,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 05:19:37] 2026-03-11 05:18:41,310 | INFO     | collected zombie processes
[2026-03-11 05:19:37] 2026-03-11 05:18:41,310 | INFO     | will attempt to kill all subprocesses of pid=421828
[2026-03-11 05:19:37] 2026-03-11 05:18:41,750 | INFO     | process IDs to be killed: [421828] (in reverse order)
[2026-03-11 05:19:37] 2026-03-11 05:18:41,907 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 05:19:37] 2026-03-11 05:18:41,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 05:19:37] 2026-03-11 05:18:41,935 | INFO     | did not find any defunct processes belonging to 421828
[2026-03-11 05:19:37] 2026-03-11 05:18:41,958 | INFO     | did not find any defunct processes belonging to 421828
[2026-03-11 05:19:37] 2026-03-11 05:18:41,959 | INFO     | ready for new job
[2026-03-11 05:19:37] 2026-03-11 05:18:41,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 05:19:37] 2026-03-11 05:18:41,961 | INFO     | **************************************
[2026-03-11 05:19:37] 2026-03-11 05:18:41,961 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 05:19:37] 2026-03-11 05:18:41,961 | INFO     | **************************************
[2026-03-11 05:19:37] 2026-03-11 05:18:41,961 | INFO     | 
[2026-03-11 05:19:37] 2026-03-11 05:18:41,996 | INFO     | architecture information:
[2026-03-11 05:19:37] 2026-03-11 05:18:41,996 | INFO     | executing command: cat /etc/os-release
[2026-03-11 05:19:37] 2026-03-11 05:18:42,016 | INFO     | cat /etc/os-release:
[2026-03-11 05:19:37] NAME="CentOS Linux"
[2026-03-11 05:19:37] VERSION="7 (Core)"
[2026-03-11 05:19:37] ID="centos"
[2026-03-11 05:19:37] ID_LIKE="rhel fedora"
[2026-03-11 05:19:37] VERSION_ID="7"
[2026-03-11 05:19:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 05:19:37] ANSI_COLOR="0;31"
[2026-03-11 05:19:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 05:19:37] HOME_URL="https://www.centos.org/"
[2026-03-11 05:19:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 05:19:37] 
[2026-03-11 05:19:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 05:19:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 05:19:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 05:19:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 05:19:37] 
[2026-03-11 05:19:37] 2026-03-11 05:18:42,017 | INFO     | **************************************
[2026-03-11 05:19:37] 2026-03-11 05:18:42,520 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-11 05:19:37] 2026-03-11 05:18:42,549 | INFO     | sufficient remaining disk space (1725242015744 B)
[2026-03-11 05:19:37] 2026-03-11 05:18:42,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 05:19:37] 2026-03-11 05:18:42,550 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 05:19:37] 2026-03-11 05:18:42,550 | INFO     | update_server=False
[2026-03-11 05:19:37] 2026-03-11 05:18:42,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 05:19:37] 2026-03-11 05:18:42,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:19:37] 2026-03-11 05:18:42,906 | INFO     | aborting loop
[2026-03-11 05:19:37] 2026-03-11 05:18:42,924 | INFO     | all data control threads have been joined
[2026-03-11 05:19:37] 2026-03-11 05:18:43,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 05:19:37] 2026-03-11 05:18:43,556 | INFO     | [job] retrieve thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:43,574 | INFO     | all payload control threads have been joined
[2026-03-11 05:19:37] 2026-03-11 05:18:43,594 | INFO     | [data] copytool_in thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:43,888 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:43,912 | INFO     | [job] job monitor thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:43,931 | INFO     | [data] control thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,124 | INFO     | all job control threads have been joined
[2026-03-11 05:19:37] 2026-03-11 05:18:44,354 | INFO     | [payload] validate_post thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,412 | INFO     | [job] validate thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,533 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,579 | INFO     | [payload] control thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,610 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:44,631 | INFO     | [payload] failed_post thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:45,129 | INFO     | [job] control thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:45,172 | INFO     | [data] copytool_out thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:45,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 05:19:37] 2026-03-11 05:18:45,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 05:19:37] 2026-03-11 05:18:46,268 | INFO     | [job] queue monitor thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:49,617 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:18:52,699 | INFO     | job.realtimelogging is not enabled
[2026-03-11 05:19:37] 2026-03-11 05:18:53,705 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 05:19:37] 2026-03-11 05:19:12,673 | INFO     | PID=404204 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-11 05:19:37] 2026-03-11 05:19:12,673 | INFO     | .. there are 4 such processes running
[2026-03-11 05:19:37] 2026-03-11 05:19:12,673 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 05:19:37] 2026-03-11 05:19:12,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 05:19:37] 2026-03-11 05:19:12,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 05:19:37] 2026-03-11 05:19:31,919 | INFO     | [monitor] cgroup control has ended
[2026-03-11 05:19:37] 2026-03-11 05:19:32,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891948947264)>', '<ExcThread(monitor, started 139891730548480)>']
[2026-03-11 05:19:37] 2026-03-11 05:19:32,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 05:19:37] 2026-03-11 05:19:32,776 | INFO     | [monitor] control thread has ended
[2026-03-11 05:19:37] 2026-03-11 05:19:37,404 | INFO     | all workflow threads have been joined
[2026-03-11 05:19:37] 2026-03-11 05:19:37,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 05:19:37] 2026-03-11 05:19:37,404 | INFO     | traces error code: 0
[2026-03-11 05:19:37] 2026-03-11 05:19:37,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 05:19:37] 2026-03-11 05:19:37,521 [wrapper] ==== pilot stdout END ====
[2026-03-11 05:19:37] 2026-03-11 05:19:37,526 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 05:19:37] 2026-03-11 05:19:37,530 [wrapper] pilotpid: 404204
[2026-03-11 05:19:37] 2026-03-11 05:19:37,535 [wrapper] Pilot exit status: 0
[2026-03-11 05:19:37] 2026-03-11 05:19:37,549 [wrapper] pandaids: 7036125942
[2026-03-11 05:19:37] 2026-03-11 05:19:37,670 [wrapper] cleanup supervisor_pilot  445309 404205
[2026-03-11 05:19:37] 2026-03-11 05:19:37,675 [wrapper] Test setup, not cleaning
[2026-03-11 05:19:37] 2026-03-11 05:19:37,680 [wrapper] apfmon messages muted
[2026-03-11 05:19:37] 2026-03-11 05:19:37,684 [wrapper] ==== wrapper stdout END ====
[2026-03-11 05:19:37] 2026-03-11 05:19:37,689 [wrapper] ==== wrapper stderr END ====
[2026-03-11 05:19:37]  *** Error codes and diagnostics ***
[2026-03-11 05:19:37]     "exeErrorCode": 0,
[2026-03-11 05:19:37]     "exeErrorDiag": "",
[2026-03-11 05:19:37]     "pilotErrorCode": 0,
[2026-03-11 05:19:37]     "pilotErrorDiag": "",
[2026-03-11 05:19:37]  *** Listing of results directory ***
[2026-03-11 05:19:37] total 489652
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc    584627 Mar  2 22:33 pilot3.tar.gz
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc      5111 Mar  2 22:33 queuedata.json
[2026-03-11 05:19:37] -rwx------ 1 boinc boinc     36322 Mar  2 22:34 runpilot2-wrapper.sh
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc       100 Mar 11 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 05:19:37] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 04:40 run_atlas
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc       105 Mar 11 04:40 job.xml
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc 278951250 Mar 11 04:40 EVNT.48220117._000161.pool.root.1
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc     15845 Mar 11 04:40 start_atlas.sh
[2026-03-11 05:19:37] drwxrwx--x 2 boinc boinc      4096 Mar 11 04:40 shared
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc    597961 Mar 11 04:40 input.tar.gz
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc      9415 Mar 11 04:40 init_data.xml
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc         0 Mar 11 04:40 boinc_setup_complete
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc         0 Mar 11 04:40 boinc_lockfile
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc      2572 Mar 11 04:40 pandaJob.out
[2026-03-11 05:19:37] -rw------- 1 boinc boinc   1006644 Mar 11 04:40 agis_schedconf.cvmfs.json
[2026-03-11 05:19:37] -rw------- 1 boinc boinc   1511578 Mar 11 04:40 agis_ddmendpoints.agis.ALL.json
[2026-03-11 05:19:37] -rw------- 1 boinc boinc       421 Mar 11 04:40 workernode_map.json
[2026-03-11 05:19:37] drwx------ 5 boinc boinc      4096 Mar 11 04:40 pilot3
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc       529 Mar 11 05:18 boinc_task_state.xml
[2026-03-11 05:19:37] -rw------- 1 boinc boinc 217074713 Mar 11 05:18 HITS.48838447._003911.pool.root.1
[2026-03-11 05:19:37] -rw------- 1 boinc boinc        95 Mar 11 05:18 pilot_heartbeat.json
[2026-03-11 05:19:37] -rw------- 1 boinc boinc      1037 Mar 11 05:18 memory_monitor_summary.json
[2026-03-11 05:19:37] -rw------- 1 boinc boinc    357952 Mar 11 05:18 log.48838447._003911.job.log.tgz.1
[2026-03-11 05:19:37] -rw------- 1 boinc boinc      6280 Mar 11 05:18 heartbeat.json
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc        27 Mar 11 05:19 wrapper_checkpoint.txt
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc      8192 Mar 11 05:19 boinc_mmap_file
[2026-03-11 05:19:37] -rw------- 1 boinc boinc      4893 Mar 11 05:19 pilotlog.txt
[2026-03-11 05:19:37] -rw------- 1 boinc boinc    358061 Mar 11 05:19 log.48838447._003911.job.log.1
[2026-03-11 05:19:37] -rw------- 1 boinc boinc       357 Mar 11 05:19 output.list
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc       620 Mar 11 05:19 runtime_log
[2026-03-11 05:19:37] -rw------- 1 boinc boinc    737280 Mar 11 05:19 result.tar.gz
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc      8787 Mar 11 05:19 runtime_log.err
[2026-03-11 05:19:37] -rw------- 1 boinc boinc       642 Mar 11 05:19 b9ANDmE1QH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuuCLDmBe0gFo.diag
[2026-03-11 05:19:37] -rw-r--r-- 1 boinc boinc     20976 Mar 11 05:19 stderr.txt
[2026-03-11 05:19:37] HITS file was successfully produced:
[2026-03-11 05:19:37] -rw------- 1 boinc boinc 217074713 Mar 11 05:18 shared/HITS.pool.root.1
[2026-03-11 05:19:37]  *** Contents of shared directory: ***
[2026-03-11 05:19:37] total 485732
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc 278951250 Mar 11 04:40 ATLAS.root_0
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc     15845 Mar 11 04:40 start_atlas.sh
[2026-03-11 05:19:37] -rw-r--r-- 2 boinc boinc    597961 Mar 11 04:40 input.tar.gz
[2026-03-11 05:19:37] -rw------- 1 boinc boinc 217074713 Mar 11 05:18 HITS.pool.root.1
[2026-03-11 05:19:37] -rw------- 1 boinc boinc    737280 Mar 11 05:19 result.tar.gz
05:19:39 (395780): run_atlas exited; CPU time 23779.485477
05:19:39 (395780): called boinc_finish(0)

</stderr_txt>
]]>

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