Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:28:29 (4085916): wrapper (7.7.26015): starting
02:28:29 (4085916): wrapper: running run_atlas (--nthreads 12)
[2026-03-11 02:28:29] Arguments: --nthreads 12
[2026-03-11 02:28:29] Threads: 12
[2026-03-11 02:28:29] Checking for CVMFS
[2026-03-11 02:28:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-11 02:28:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-11 02:28:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-11 02:28:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-11 02:28:29] 2.11.0.0 3995929 0 35188 157138 3 80 3651454 6144000 1034 130560 0 196874 99.992 2801 700 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-03-11 02:28:29] CVMFS is ok
[2026-03-11 02:28:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-11 02:28:29] Checking for apptainer binary...
[2026-03-11 02:28:29] apptainer is not installed, using version from CVMFS
[2026-03-11 02:28:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-11 02:28:29] radiat0r
[2026-03-11 02:28:29] apptainer works
[2026-03-11 02:28:29] Set ATHENA_PROC_NUMBER=12
[2026-03-11 02:28:29] Set ATHENA_CORE_NUMBER=12
[2026-03-11 02:28:29] Starting ATLAS job with PandaID=7036125785
[2026-03-11 02:28:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 03:33:57]  *** The last 200 lines of the pilot log: ***
[2026-03-11 03:33:57]  filesize=371231
[2026-03-11 03:33:57]  filetype=log
[2026-03-11 03:33:57]  guid=c7f81525-150c-48ca-a6f8-69aef6e8173c
[2026-03-11 03:33:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-11 03:33:57]  is_altstaged=None
[2026-03-11 03:33:57]  is_tar=False
[2026-03-11 03:33:57]  lfn=log.48838447._003754.job.log.tgz.1
[2026-03-11 03:33:57]  mtime=0
[2026-03-11 03:33:57]  protocol_id=None
[2026-03-11 03:33:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 03:33:57]  replicas=None
[2026-03-11 03:33:57]  scope=mc23_13p6TeV
[2026-03-11 03:33:57]  status=None
[2026-03-11 03:33:57]  status_code=0
[2026-03-11 03:33:57]  storage_token=
[2026-03-11 03:33:57]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-7036125785/log.48838447._003754.job.log.tgz.1
[2026-03-11 03:33:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/84/log.48838447._003754.job.log.tgz.1
[2026-03-11 03:33:57]  workdir=None
[2026-03-11 03:33:57] ]
[2026-03-11 03:33:57] 2026-03-11 03:33:00,542 | INFO     | transferring file log.48838447._003754.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-7036125785/log.48838447._003754.job.log.tgz.1 to /var/lib/boinc/slots
[2026-03-11 03:33:57] 2026-03-11 03:33:00,543 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-7036125785/log.48838447._003754.job.log.tgz.1 /var/lib/boinc/slots/18/log.48838447._003754.j
[2026-03-11 03:33:57] 2026-03-11 03:33:00,564 | INFO     | adding to output.list: log.48838447._003754.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/84/log.48838447._003754.job.log.tg
[2026-03-11 03:33:57] 2026-03-11 03:33:00,565 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 03:33:57] 2026-03-11 03:33:00,565 | INFO     | summary of transferred files:
[2026-03-11 03:33:57] 2026-03-11 03:33:00,565 | INFO     |  -- lfn=log.48838447._003754.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 03:33:57] 2026-03-11 03:33:00,565 | INFO     | stage-out finished correctly
[2026-03-11 03:33:57] 2026-03-11 03:33:00,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 03:33:57] 2026-03-11 03:33:00,780 | INFO     | time since job start (3854s) is within the limit (349056.0s)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,429 | INFO     | job 7036125785 has state=finished
[2026-03-11 03:33:57] 2026-03-11 03:33:02,432 | INFO     | preparing for final server update for job 7036125785 in state='finished'
[2026-03-11 03:33:57] 2026-03-11 03:33:02,433 | INFO     | reading metadata from: /var/lib/boinc/slots/18/PanDA_Pilot-7036125785/jobReport.json
[2026-03-11 03:33:57] 2026-03-11 03:33:02,435 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/18/workernode_map.json
[2026-03-11 03:33:57] 2026-03-11 03:33:02,436 | INFO     | this job has now completed (state=finished)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,436 | INFO     | log transfer has been attempted: DONE
[2026-03-11 03:33:57] 2026-03-11 03:33:02,436 | INFO     | job 7036125785 has finished - writing final server update
[2026-03-11 03:33:57] 2026-03-11 03:33:02,436 | INFO     | total number of processed events: 400 (read)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,494 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7036125785/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,495 | INFO     | extracted standard info from prmon json
[2026-03-11 03:33:57] 2026-03-11 03:33:02,495 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 03:33:57] 2026-03-11 03:33:02,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 03:33:57] 2026-03-11 03:33:02,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 03:33:57] 2026-03-11 03:33:02,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 03:33:57] 2026-03-11 03:33:02,496 | INFO     | fitting pss+swap vs Time
[2026-03-11 03:33:57] 2026-03-11 03:33:02,496 | INFO     | sum of square deviations: 54438230.0
[2026-03-11 03:33:57] 2026-03-11 03:33:02,496 | INFO     | sum of deviations: 55822167.49999992
[2026-03-11 03:33:57] 2026-03-11 03:33:02,496 | INFO     | mean x: 1773198131.5
[2026-03-11 03:33:57] 2026-03-11 03:33:02,496 | INFO     | mean y: 2723718.839285714
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | intersect: -1815552942.7509217
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | chi2: 0.0014246408687189798
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | current memory leak: 1.03 B/s (using 56 data points, chi2=0.00)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | could have reported an average CPU frequency of 1913 MHz (6 samples)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | ..............................
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . Timing measurements:
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . get job = 0 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . initial setup = 6 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . payload setup = 6 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . stage-in = 0 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . payload execution = 3831 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . stage-out = 0 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | . log creation = 0 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,497 | INFO     | ..............................
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | 
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | job summary report
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | --------------------------------------------------
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | PanDA job id: 7036125785
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | task id: 48838447
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | errors: (none)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 03:33:57] 2026-03-11 03:33:02,636 | INFO     | pilot state: finished 
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | transexitcode: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | exeerrorcode: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | exeerrordiag: 
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | exitcode: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | exitmsg: OK
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | cpuconsumptiontime: 42797 s
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | nevents: 400
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | neventsw: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | pid: 4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | pgrp: 4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | corecount: 12
[2026-03-11 03:33:57] 2026-03-11 03:33:02,637 | INFO     | event service: False
[2026-03-11 03:33:57] 2026-03-11 03:33:02,638 | INFO     | sizes: {0: 2280246, 11: 2280246, 3841: 2306266, 3843: 2315322, 3845: 2315460}
[2026-03-11 03:33:57] 2026-03-11 03:33:02,638 | INFO     | --------------------------------------------------
[2026-03-11 03:33:57] 2026-03-11 03:33:02,638 | INFO     | 
[2026-03-11 03:33:57] 2026-03-11 03:33:02,638 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-03-11 03:33:57] 2026-03-11 03:33:02,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 03:33:57] 2026-03-11 03:33:02,678 | INFO     | job 7036125785 has completed (purged errors)
[2026-03-11 03:33:57] 2026-03-11 03:33:02,678 | INFO     | overall cleanup function is called
[2026-03-11 03:33:57] 2026-03-11 03:33:03,688 | INFO     | --- collectZombieJob: --- 10, [4171738]
[2026-03-11 03:33:57] 2026-03-11 03:33:03,689 | INFO     | zombie collector waiting for pid 4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:03,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 03:33:57] 2026-03-11 03:33:03,689 | INFO     | collected zombie processes
[2026-03-11 03:33:57] 2026-03-11 03:33:03,689 | INFO     | will attempt to kill all subprocesses of pid=4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:04,185 | INFO     | process IDs to be killed: [4171738] (in reverse order)
[2026-03-11 03:33:57] 2026-03-11 03:33:04,386 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 03:33:57] 2026-03-11 03:33:04,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 03:33:57] 2026-03-11 03:33:04,412 | INFO     | did not find any defunct processes belonging to 4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:04,430 | INFO     | did not find any defunct processes belonging to 4171738
[2026-03-11 03:33:57] 2026-03-11 03:33:04,431 | INFO     | ready for new job
[2026-03-11 03:33:57] 2026-03-11 03:33:04,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 03:33:57] 2026-03-11 03:33:04,433 | INFO     | **************************************
[2026-03-11 03:33:57] 2026-03-11 03:33:04,433 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 03:33:57] 2026-03-11 03:33:04,433 | INFO     | **************************************
[2026-03-11 03:33:57] 2026-03-11 03:33:04,433 | INFO     | 
[2026-03-11 03:33:57] 2026-03-11 03:33:04,446 | INFO     | architecture information:
[2026-03-11 03:33:57] 2026-03-11 03:33:04,446 | INFO     | executing command: cat /etc/os-release
[2026-03-11 03:33:57] 2026-03-11 03:33:04,461 | INFO     | cat /etc/os-release:
[2026-03-11 03:33:57] NAME="CentOS Linux"
[2026-03-11 03:33:57] VERSION="7 (Core)"
[2026-03-11 03:33:57] ID="centos"
[2026-03-11 03:33:57] ID_LIKE="rhel fedora"
[2026-03-11 03:33:57] VERSION_ID="7"
[2026-03-11 03:33:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 03:33:57] ANSI_COLOR="0;31"
[2026-03-11 03:33:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 03:33:57] HOME_URL="https://www.centos.org/"
[2026-03-11 03:33:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 03:33:57] 
[2026-03-11 03:33:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 03:33:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 03:33:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 03:33:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 03:33:57] 
[2026-03-11 03:33:57] 2026-03-11 03:33:04,464 | INFO     | **************************************
[2026-03-11 03:33:57] 2026-03-11 03:33:04,966 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-03-11 03:33:57] 2026-03-11 03:33:04,990 | INFO     | sufficient remaining disk space (1720260231168 B)
[2026-03-11 03:33:57] 2026-03-11 03:33:04,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 03:33:57] 2026-03-11 03:33:04,991 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 03:33:57] 2026-03-11 03:33:04,991 | INFO     | update_server=False
[2026-03-11 03:33:57] 2026-03-11 03:33:04,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 03:33:57] 2026-03-11 03:33:05,027 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-11 03:33:57] 2026-03-11 03:33:05,030 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-11 03:33:57] 2026-03-11 03:33:05,030 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 03:33:57] 2026-03-11 03:33:05,030 | INFO     | will abort loop
[2026-03-11 03:33:57] 2026-03-11 03:33:05,273 | INFO     | all job control threads have been joined
[2026-03-11 03:33:57] 2026-03-11 03:33:05,867 | INFO     | all data control threads have been joined
[2026-03-11 03:33:57] 2026-03-11 03:33:05,994 | INFO     | [job] retrieve thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,034 | INFO     | [job] job monitor thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,122 | INFO     | [payload] validate_post thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 03:33:57] 2026-03-11 03:33:06,270 | INFO     | all payload control threads have been joined
[2026-03-11 03:33:57] 2026-03-11 03:33:06,278 | INFO     | [job] control thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,657 | INFO     | [job] validate thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,668 | INFO     | [payload] failed_post thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 03:33:57] 2026-03-11 03:33:06,874 | INFO     | [data] control thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:06,992 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:07,011 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:07,111 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:07,275 | INFO     | [payload] control thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:07,454 | INFO     | [data] copytool_in thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:07,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 03:33:57] 2026-03-11 03:33:08,143 | INFO     | [data] copytool_out thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:08,571 | INFO     | [job] queue monitor thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:10,730 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:15,038 | INFO     | job.realtimelogging is not enabled
[2026-03-11 03:33:57] 2026-03-11 03:33:16,044 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 03:33:57] 2026-03-11 03:33:34,477 | INFO     | PID=4112597 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 03:33:57] 2026-03-11 03:33:34,477 | INFO     | .. there are 16 such processes running
[2026-03-11 03:33:57] 2026-03-11 03:33:34,477 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 03:33:57] 2026-03-11 03:33:34,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 03:33:57] 2026-03-11 03:33:34,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 03:33:57] 2026-03-11 03:33:52,050 | INFO     | [monitor] cgroup control has ended
[2026-03-11 03:33:57] 2026-03-11 03:33:52,276 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074406291264)>', '<ExcThread(monitor, started 140073823618816)>']
[2026-03-11 03:33:57] 2026-03-11 03:33:52,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 03:33:57] 2026-03-11 03:33:52,564 | INFO     | [monitor] control thread has ended
[2026-03-11 03:33:57] 2026-03-11 03:33:57,302 | INFO     | all workflow threads have been joined
[2026-03-11 03:33:57] 2026-03-11 03:33:57,302 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 03:33:57] 2026-03-11 03:33:57,302 | INFO     | traces error code: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:57,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 03:33:57] 2026-03-11 03:33:57,405 [wrapper] ==== pilot stdout END ====
[2026-03-11 03:33:57] 2026-03-11 03:33:57,408 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 03:33:57] 2026-03-11 03:33:57,410 [wrapper] pilotpid: 4112597
[2026-03-11 03:33:57] 2026-03-11 03:33:57,412 [wrapper] Pilot exit status: 0
[2026-03-11 03:33:57] 2026-03-11 03:33:57,420 [wrapper] pandaids: 7036125785
[2026-03-11 03:33:57] 2026-03-11 03:33:57,526 [wrapper] cleanup supervisor_pilot   89739 4112598
[2026-03-11 03:33:57] 2026-03-11 03:33:57,528 [wrapper] Test setup, not cleaning
[2026-03-11 03:33:57] 2026-03-11 03:33:57,530 [wrapper] apfmon messages muted
[2026-03-11 03:33:57] 2026-03-11 03:33:57,532 [wrapper] ==== wrapper stdout END ====
[2026-03-11 03:33:57] 2026-03-11 03:33:57,534 [wrapper] ==== wrapper stderr END ====
[2026-03-11 03:33:57]  *** Error codes and diagnostics ***
[2026-03-11 03:33:57]     "exeErrorCode": 0,
[2026-03-11 03:33:57]     "exeErrorDiag": "",
[2026-03-11 03:33:57]     "pilotErrorCode": 0,
[2026-03-11 03:33:57]     "pilotErrorDiag": "",
[2026-03-11 03:33:57]  *** Listing of results directory ***
[2026-03-11 03:33:57] total 492924
[2026-03-11 03:33:57] -rwx------ 1 boinc boinc     36322 Mar  2 22:33 runpilot2-wrapper.sh
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc    584627 Mar  2 22:33 pilot3.tar.gz
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc      5111 Mar  2 22:33 queuedata.json
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc       100 Mar 11 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 03:33:57] -rwxr-xr-x 1 boinc boinc      7986 Mar 11 02:28 run_atlas
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc       105 Mar 11 02:28 job.xml
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc     15845 Mar 11 02:28 start_atlas.sh
[2026-03-11 03:33:57] drwxrwx--x 2 boinc boinc      4096 Mar 11 02:28 shared
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc    597960 Mar 11 02:28 input.tar.gz
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc      9415 Mar 11 02:28 init_data.xml
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc 279490216 Mar 11 02:28 EVNT.48220117._000155.pool.root.1
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc         0 Mar 11 02:28 boinc_setup_complete
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc         0 Mar 11 02:28 boinc_lockfile
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc      2572 Mar 11 02:28 pandaJob.out
[2026-03-11 03:33:57] -rw------- 1 boinc boinc   1006644 Mar 11 02:28 agis_schedconf.cvmfs.json
[2026-03-11 03:33:57] -rw------- 1 boinc boinc   1511578 Mar 11 02:28 agis_ddmendpoints.agis.ALL.json
[2026-03-11 03:33:57] -rw------- 1 boinc boinc       416 Mar 11 02:28 workernode_map.json
[2026-03-11 03:33:57] drwx------ 5 boinc boinc      4096 Mar 11 02:28 pilot3
[2026-03-11 03:33:57] -rw------- 1 boinc boinc 219453623 Mar 11 03:32 HITS.48838447._003754.pool.root.1
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc       529 Mar 11 03:32 boinc_task_state.xml
[2026-03-11 03:33:57] -rw------- 1 boinc boinc        95 Mar 11 03:32 pilot_heartbeat.json
[2026-03-11 03:33:57] -rw------- 1 boinc boinc      1025 Mar 11 03:32 memory_monitor_summary.json
[2026-03-11 03:33:57] -rw------- 1 boinc boinc    371231 Mar 11 03:33 log.48838447._003754.job.log.tgz.1
[2026-03-11 03:33:57] -rw------- 1 boinc boinc      6276 Mar 11 03:33 heartbeat.json
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc      8192 Mar 11 03:33 boinc_mmap_file
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc        27 Mar 11 03:33 wrapper_checkpoint.txt
[2026-03-11 03:33:57] -rw------- 1 boinc boinc      5081 Mar 11 03:33 pilotlog.txt
[2026-03-11 03:33:57] -rw------- 1 boinc boinc    561197 Mar 11 03:33 log.48838447._003754.job.log.1
[2026-03-11 03:33:57] -rw------- 1 boinc boinc       357 Mar 11 03:33 output.list
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc       620 Mar 11 03:33 runtime_log
[2026-03-11 03:33:57] -rw------- 1 boinc boinc    952320 Mar 11 03:33 result.tar.gz
[2026-03-11 03:33:57] -rw------- 1 boinc boinc       643 Mar 11 03:33 z9KMDmG0QH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2qCLDme9CjLm.diag
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc      8787 Mar 11 03:33 runtime_log.err
[2026-03-11 03:33:57] -rw-r--r-- 1 boinc boinc     20854 Mar 11 03:33 stderr.txt
[2026-03-11 03:33:57] HITS file was successfully produced:
[2026-03-11 03:33:57] -rw------- 1 boinc boinc 219453623 Mar 11 03:32 shared/HITS.pool.root.1
[2026-03-11 03:33:57]  *** Contents of shared directory: ***
[2026-03-11 03:33:57] total 488792
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc     15845 Mar 11 02:28 start_atlas.sh
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc    597960 Mar 11 02:28 input.tar.gz
[2026-03-11 03:33:57] -rw-r--r-- 2 boinc boinc 279490216 Mar 11 02:28 ATLAS.root_0
[2026-03-11 03:33:57] -rw------- 1 boinc boinc 219453623 Mar 11 03:32 HITS.pool.root.1
[2026-03-11 03:33:57] -rw------- 1 boinc boinc    952320 Mar 11 03:33 result.tar.gz
03:33:59 (4085916): run_atlas exited; CPU time 43053.282489
03:33:59 (4085916): called boinc_finish(0)

</stderr_txt>
]]>

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