Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:45:58 (3755463): wrapper (7.7.26015): starting
22:45:58 (3755463): wrapper: running run_atlas (--nthreads 9)
[2026-03-10 22:45:58] Arguments: --nthreads 9
[2026-03-10 22:45:58] Threads: 9
[2026-03-10 22:45:58] Checking for CVMFS
[2026-03-10 22:45:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-10 22:45:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-10 22:45:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-10 22:46:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-10 22:46:00] 2.13.3.0 8993 101451 290892 157138 2 925 23880945 40960001 34021 16776704 0 651645789 99.754 469025104 46267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-10 22:46:00] CVMFS is ok
[2026-03-10 22:46:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 22:46:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 22:46:00] Further information can be found at the LHC@home message board.
[2026-03-10 22:46:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 22:46:00] Checking for apptainer binary...
[2026-03-10 22:46:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-10 22:46:00] Running /usr/bin/apptainer --version
[2026-03-10 22:46:00] apptainer version 1.4.5-2.el9
[2026-03-10 22:46:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 22:46:01] c-208-40.aglt2.org
[2026-03-10 22:46:01] apptainer works
[2026-03-10 22:46:01] Set ATHENA_PROC_NUMBER=9
[2026-03-10 22:46:01] Set ATHENA_CORE_NUMBER=9
[2026-03-10 22:46:01] Starting ATLAS job with PandaID=7036125766
[2026-03-10 22:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-11 00:19:53]  *** The last 200 lines of the pilot log: ***
[2026-03-11 00:19:53]  is_altstaged=None
[2026-03-11 00:19:53]  is_tar=False
[2026-03-11 00:19:53]  lfn=log.48838447._003735.job.log.tgz.1
[2026-03-11 00:19:53]  mtime=0
[2026-03-11 00:19:53]  protocol_id=None
[2026-03-11 00:19:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-11 00:19:53]  replicas=None
[2026-03-11 00:19:53]  scope=mc23_13p6TeV
[2026-03-11 00:19:53]  status=None
[2026-03-11 00:19:53]  status_code=0
[2026-03-11 00:19:53]  storage_token=
[2026-03-11 00:19:53]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7036125766/log.48838447._003735.job.log.tgz.1
[2026-03-11 00:19:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/a6/log.48838447._003735.job.log.tgz.1
[2026-03-11 00:19:53]  workdir=None
[2026-03-11 00:19:53] ]
[2026-03-11 00:19:53] 2026-03-11 04:19:15,164 | INFO     | transferring file log.48838447._003735.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7036125766/log.48838447._003735.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-11 00:19:53] 2026-03-11 04:19:15,165 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7036125766/log.48838447._003735.job.log.tgz.1 /tmp/boinchome/slots/3/log.48838447._003735.job
[2026-03-11 00:19:53] 2026-03-11 04:19:15,291 | INFO     | adding to output.list: log.48838447._003735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/a6/log.48838447._003735.job.log.tg
[2026-03-11 00:19:53] 2026-03-11 04:19:15,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-11 00:19:53] 2026-03-11 04:19:15,292 | INFO     | summary of transferred files:
[2026-03-11 00:19:53] 2026-03-11 04:19:15,292 | INFO     |  -- lfn=log.48838447._003735.job.log.tgz.1, status_code=0, status=transferred
[2026-03-11 00:19:53] 2026-03-11 04:19:15,292 | INFO     | stage-out finished correctly
[2026-03-11 00:19:53] 2026-03-11 04:19:15,529 | INFO     | time since job start (5503s) is within the limit (349056.0s)
[2026-03-11 00:19:53] 2026-03-11 04:19:16,743 | WARNING  | process 3775828 can no longer be monitored (due to stat problems) - aborting
[2026-03-11 00:19:53] 2026-03-11 04:19:16,743 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7036125766/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 00:19:53] 2026-03-11 04:19:17,540 | INFO     | time since job start (5505s) is within the limit (349056.0s)
[2026-03-11 00:19:53] 2026-03-11 04:19:17,635 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-11 00:19:53] 2026-03-11 04:19:18,117 | INFO     | number of running child processes to parent process 3775828: 1
[2026-03-11 00:19:53] 2026-03-11 04:19:18,117 | INFO     | maximum number of monitored processes: 6
[2026-03-11 00:19:53] 2026-03-11 04:19:18,176 | INFO     | job 7036125766 has state=finished
[2026-03-11 00:19:53] 2026-03-11 04:19:18,176 | INFO     | preparing for final server update for job 7036125766 in state='finished'
[2026-03-11 00:19:53] 2026-03-11 04:19:18,286 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,286 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7036125766/jobReport.json
[2026-03-11 00:19:53] 2026-03-11 04:19:18,288 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-11 00:19:53] 2026-03-11 04:19:18,302 | INFO     | this job has now completed (state=finished)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,302 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,302 | INFO     | log transfer has been attempted: DONE
[2026-03-11 00:19:53] 2026-03-11 04:19:18,302 | INFO     | job 7036125766 has finished - writing final server update
[2026-03-11 00:19:53] 2026-03-11 04:19:18,303 | INFO     | total number of processed events: 400 (read)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,369 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7036125766/memory_monitor_summary.json (trf name=prmon)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,369 | INFO     | extracted standard info from prmon json
[2026-03-11 00:19:53] 2026-03-11 04:19:18,369 | INFO     | extracted standard memory fields from prmon json
[2026-03-11 00:19:53] 2026-03-11 04:19:18,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-11 00:19:53] 2026-03-11 04:19:18,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-11 00:19:53] 2026-03-11 04:19:18,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-11 00:19:53] 2026-03-11 04:19:18,389 | INFO     | fitting pss+swap vs Time
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | sum of square deviations: 170952718.39024365
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | sum of deviations: 620186557.8536586
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | mean x: 1773200102.5365853
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | mean y: 2594202.548780488
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | intersect: -6430265586.597928
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | chi2: 0.022633407551114895
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | current memory leak: 3.63 B/s (using 82 data points, chi2=0.02)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,390 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | ..............................
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . Timing measurements:
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . get job = 0 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . initial setup = 31 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . payload setup = 35 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . stage-in = 0 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . payload execution = 5447 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . stage-out = 1 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | . log creation = 0 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,391 | INFO     | ..............................
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | 
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | job summary report
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | --------------------------------------------------
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | PanDA job id: 7036125766
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | task id: 48838447
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | errors: (none)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | pilot state: finished 
[2026-03-11 00:19:53] 2026-03-11 04:19:18,624 | INFO     | transexitcode: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | exeerrorcode: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | exeerrordiag: 
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | exitcode: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | exitmsg: OK
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | cpuconsumptiontime: 25155 s
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | nevents: 400
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | neventsw: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | pid: 3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | pgrp: 3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | corecount: 9
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | event service: False
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | sizes: {0: 2279812, 1: 2279840, 2: 2280301, 13: 2280301, 5487: 2306982, 5488: 2306981, 5490: 2316163, 5492: 2316219, 5493: 2316413}
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | --------------------------------------------------
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | 
[2026-03-11 00:19:53] 2026-03-11 04:19:18,625 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-11 00:19:53] 2026-03-11 04:19:18,701 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-11 00:19:53] 2026-03-11 04:19:18,702 | INFO     | job 7036125766 has completed (purged errors)
[2026-03-11 00:19:53] 2026-03-11 04:19:18,703 | INFO     | overall cleanup function is called
[2026-03-11 00:19:53] 2026-03-11 04:19:19,715 | INFO     | --- collectZombieJob: --- 10, [3775828]
[2026-03-11 00:19:53] 2026-03-11 04:19:19,715 | INFO     | zombie collector waiting for pid 3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:19,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-11 00:19:53] 2026-03-11 04:19:19,715 | INFO     | collected zombie processes
[2026-03-11 00:19:53] 2026-03-11 04:19:19,715 | INFO     | will attempt to kill all subprocesses of pid=3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:20,768 | INFO     | process IDs to be killed: [3775828] (in reverse order)
[2026-03-11 00:19:53] 2026-03-11 04:19:21,108 | WARNING  | found no corresponding commands to process id(s)
[2026-03-11 00:19:53] 2026-03-11 04:19:21,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-11 00:19:53] 2026-03-11 04:19:21,133 | INFO     | did not find any defunct processes belonging to 3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:21,157 | INFO     | did not find any defunct processes belonging to 3775828
[2026-03-11 00:19:53] 2026-03-11 04:19:21,157 | INFO     | ready for new job
[2026-03-11 00:19:53] 2026-03-11 04:19:21,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-11 00:19:53] 2026-03-11 04:19:21,171 | INFO     | **************************************
[2026-03-11 00:19:53] 2026-03-11 04:19:21,171 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-11 00:19:53] 2026-03-11 04:19:21,171 | INFO     | **************************************
[2026-03-11 00:19:53] 2026-03-11 04:19:21,171 | INFO     | 
[2026-03-11 00:19:53] 2026-03-11 04:19:21,200 | INFO     | architecture information:
[2026-03-11 00:19:53] 2026-03-11 04:19:21,204 | INFO     | executing command: cat /etc/os-release
[2026-03-11 00:19:53] 2026-03-11 04:19:21,336 | INFO     | cat /etc/os-release:
[2026-03-11 00:19:53] NAME="CentOS Linux"
[2026-03-11 00:19:53] VERSION="7 (Core)"
[2026-03-11 00:19:53] ID="centos"
[2026-03-11 00:19:53] ID_LIKE="rhel fedora"
[2026-03-11 00:19:53] VERSION_ID="7"
[2026-03-11 00:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-11 00:19:53] ANSI_COLOR="0;31"
[2026-03-11 00:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-11 00:19:53] HOME_URL="https://www.centos.org/"
[2026-03-11 00:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-11 00:19:53] 
[2026-03-11 00:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-11 00:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-11 00:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-11 00:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-11 00:19:53] 
[2026-03-11 00:19:53] 2026-03-11 04:19:21,337 | INFO     | **************************************
[2026-03-11 00:19:53] 2026-03-11 04:19:21,840 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-11 00:19:53] 2026-03-11 04:19:21,917 | INFO     | sufficient remaining disk space (168171667456 B)
[2026-03-11 00:19:53] 2026-03-11 04:19:21,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | INFO     | current server update state: UPDATING_FINAL
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | INFO     | update_server=False
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:19:53] 2026-03-11 04:19:21,918 | INFO     | aborting loop
[2026-03-11 00:19:53] 2026-03-11 04:19:22,628 | INFO     | all job control threads have been joined
[2026-03-11 00:19:53] 2026-03-11 04:19:22,724 | INFO     | all data control threads have been joined
[2026-03-11 00:19:53] 2026-03-11 04:19:22,921 | INFO     | all payload control threads have been joined
[2026-03-11 00:19:53] 2026-03-11 04:19:22,939 | INFO     | [job] retrieve thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:22,943 | INFO     | [job] job monitor thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,162 | INFO     | [payload] execute_payloads thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-11 00:19:53] 2026-03-11 04:19:23,636 | INFO     | [job] control thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,654 | INFO     | [payload] validate_pre thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,662 | INFO     | [job] validate thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,662 | INFO     | [data] copytool_in thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,666 | INFO     | [job] create_data_payload thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,715 | INFO     | [payload] failed_post thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,735 | INFO     | [data] control thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-11 00:19:53] 2026-03-11 04:19:23,926 | INFO     | [data] copytool_out thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:23,927 | INFO     | [payload] control thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:24,112 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:24,317 | INFO     | [payload] validate_post thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:24,532 | INFO     | [job] queue monitor thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:27,934 | INFO     | [data] queue_monitor thread has finished
[2026-03-11 00:19:53] 2026-03-11 04:19:41,628 | INFO     | [monitor] cgroup control has ended
[2026-03-11 00:19:53] 2026-03-11 04:19:42,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492836345664)>', '<ExcThread(monitor, started 140492457105152)>']
[2026-03-11 00:19:53] 2026-03-11 04:19:47,630 | INFO     | all workflow threads have been joined
[2026-03-11 00:19:53] 2026-03-11 04:19:47,630 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-11 00:19:53] 2026-03-11 04:19:47,630 | INFO     | traces error code: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:47,630 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-11 00:19:53] 2026-03-11 04:19:52,199 | INFO     | PID=3766485 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-11 00:19:53] 2026-03-11 04:19:52,214 | INFO     | .. there are 41 such processes running
[2026-03-11 00:19:53] 2026-03-11 04:19:52,214 | INFO     | found 0 job(s) in 20 queues
[2026-03-11 00:19:53] 2026-03-11 04:19:52,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-11 00:19:53] 2026-03-11 04:19:52,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-11 00:19:53] 2026-03-11 04:19:52,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-11 00:19:53] 2026-03-11 04:19:52,215 | CRITICAL | thread 'MainThread' is not alive
[2026-03-11 00:19:53] 2026-03-11 04:19:52,215 | INFO     | [monitor] control thread has ended
[2026-03-11 00:19:53] 2026-03-11 04:19:52,412 [wrapper] ==== pilot stdout END ====
[2026-03-11 00:19:53] 2026-03-11 04:19:52,452 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-11 00:19:53] 2026-03-11 04:19:52,469 [wrapper] pilotpid: 3766485
[2026-03-11 00:19:53] 2026-03-11 04:19:52,500 [wrapper] Pilot exit status: 0
[2026-03-11 00:19:53] 2026-03-11 04:19:52,593 [wrapper] pandaids: 7036125766
[2026-03-11 00:19:53] 2026-03-11 04:19:52,905 [wrapper] cleanup supervisor_pilot   28756 3766486
[2026-03-11 00:19:53] 2026-03-11 04:19:52,922 [wrapper] Test setup, not cleaning
[2026-03-11 00:19:53] 2026-03-11 04:19:52,943 [wrapper] apfmon messages muted
[2026-03-11 00:19:53] 2026-03-11 04:19:52,979 [wrapper] ==== wrapper stdout END ====
[2026-03-11 00:19:53] 2026-03-11 04:19:53,009 [wrapper] ==== wrapper stderr END ====
[2026-03-11 00:19:53]  *** Error codes and diagnostics ***
[2026-03-11 00:19:53]     "exeErrorCode": 0,
[2026-03-11 00:19:53]     "exeErrorDiag": "",
[2026-03-11 00:19:53]     "pilotErrorCode": 0,
[2026-03-11 00:19:53]     "pilotErrorDiag": "",
[2026-03-11 00:19:53]  *** Listing of results directory ***
[2026-03-11 00:19:53] total 486728
[2026-03-11 00:19:53] -rwx------. 1 boincer umatlas     36322 Mar  2 17:33 runpilot2-wrapper.sh
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas    584627 Mar  2 17:33 pilot3.tar.gz
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas      5111 Mar  2 17:33 queuedata.json
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas       100 Mar 10 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-11 00:19:53] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 10 22:45 run_atlas
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas       105 Mar 10 22:45 job.xml
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas 281956221 Mar 10 22:45 EVNT.48220117._000154.pool.root.1
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 22:45 start_atlas.sh
[2026-03-11 00:19:53] drwxrwx--x. 2 boincer umatlas      4096 Mar 10 22:45 shared
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas    597955 Mar 10 22:45 input.tar.gz
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas         0 Mar 10 22:45 boinc_lockfile
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas      2572 Mar 10 22:46 pandaJob.out
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas        57 Mar 10 22:46 setup.sh.local
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas   1006644 Mar 10 22:47 agis_schedconf.cvmfs.json
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas   1511578 Mar 10 22:47 agis_ddmendpoints.agis.ALL.json
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas       431 Mar 10 22:47 workernode_map.json
[2026-03-11 00:19:53] drwx------. 5 boincer umatlas      4096 Mar 10 22:47 pilot3
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas      7185 Mar 11 00:11 init_data.xml
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas 210307424 Mar 11 00:18 HITS.48838447._003735.pool.root.1
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas       530 Mar 11 00:18 boinc_task_state.xml
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas        95 Mar 11 00:19 pilot_heartbeat.json
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas      1032 Mar 11 00:19 memory_monitor_summary.json
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas    355133 Mar 11 00:19 log.48838447._003735.job.log.tgz.1
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas      6327 Mar 11 00:19 heartbeat.json
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas      8192 Mar 11 00:19 boinc_mmap_file
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas        27 Mar 11 00:19 wrapper_checkpoint.txt
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas       893 Mar 11 00:19 pilotlog.txt
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas    751919 Mar 11 00:19 log.48838447._003735.job.log.1
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas       357 Mar 11 00:19 output.list
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas       620 Mar 11 00:19 runtime_log
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas   1126400 Mar 11 00:19 result.tar.gz
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas       652 Mar 11 00:19 yjhLDmG0QH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmnqCLDmvPeoum.diag
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas      9341 Mar 11 00:19 runtime_log.err
[2026-03-11 00:19:53] -rw-r--r--. 1 boincer umatlas     21533 Mar 11 00:19 stderr.txt
[2026-03-11 00:19:53] HITS file was successfully produced:
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas 210307424 Mar 11 00:18 shared/HITS.pool.root.1
[2026-03-11 00:19:53]  *** Contents of shared directory: ***
[2026-03-11 00:19:53] total 482432
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas 281956221 Mar 10 22:45 ATLAS.root_0
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas     15845 Mar 10 22:45 start_atlas.sh
[2026-03-11 00:19:53] -rw-r--r--. 2 boincer umatlas    597955 Mar 10 22:45 input.tar.gz
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas 210307424 Mar 11 00:18 HITS.pool.root.1
[2026-03-11 00:19:53] -rw-------. 1 boincer umatlas   1126400 Mar 11 00:19 result.tar.gz
00:19:55 (3755463): run_atlas exited; CPU time 25345.597290
00:19:55 (3755463): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN