Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:41:20 (2604477): wrapper (7.7.26015): starting
19:41:20 (2604477): wrapper: running run_atlas (--nthreads 4)
[2026-03-12 19:41:20] Arguments: --nthreads 4
[2026-03-12 19:41:20] Threads: 4
[2026-03-12 19:41:20] Checking for CVMFS
[2026-03-12 19:41:20] No cvmfs_config command found, will try listing directly
[2026-03-12 19:41:20] CVMFS is ok
[2026-03-12 19:41:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-12 19:41:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-12 19:41:20] Further information can be found at the LHC@home message board.
[2026-03-12 19:41:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-12 19:41:20] Checking for apptainer binary...
[2026-03-12 19:41:20] which: no apptainer in ((null))
[2026-03-12 19:41:20] apptainer is not installed, using version from CVMFS
[2026-03-12 19:41:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-12 19:41:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-12 19:41:20] apptainer works
[2026-03-12 19:41:20] Set ATHENA_PROC_NUMBER=4
[2026-03-12 19:41:20] Set ATHENA_CORE_NUMBER=4
[2026-03-12 19:41:20] Starting ATLAS job with PandaID=7049375734
[2026-03-12 19:41:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-12 23:41:16]  *** The last 200 lines of the pilot log: ***
[2026-03-12 23:41:16] 2026-03-12 22:27:20,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-12 23:41:16] 2026-03-12 22:27:20,172 | INFO     | fitting pss+swap vs Time
[2026-03-12 23:41:16] 2026-03-12 22:27:20,172 | INFO     | sum of square deviations: 3392567795.5
[2026-03-12 23:41:16] 2026-03-12 22:27:20,174 | INFO     | sum of deviations: 17087263178.5
[2026-03-12 23:41:16] 2026-03-12 22:27:20,174 | INFO     | mean x: 1773347659.5
[2026-03-12 23:41:16] 2026-03-12 22:27:20,174 | INFO     | mean y: 2317386.608108108
[2026-03-12 23:41:16] 2026-03-12 22:27:20,174 | INFO     | intersect: -8929459365.22173
[2026-03-12 23:41:16] 2026-03-12 22:27:20,175 | INFO     | chi2: 1.328876502236934
[2026-03-12 23:41:16] 2026-03-12 22:27:20,175 | INFO     | sum of square deviations: 3168461268.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,176 | INFO     | sum of deviations: 16355455419.999987
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | mean x: 1773347507.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | mean y: 2316892.184331797
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | intersect: -9151623661.81035
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | chi2: 1.329079462554983
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | current chi2=1.329079462554983 (change=-0.01527307599370357 %)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,177 | INFO     | right removable region: 216
[2026-03-12 23:41:16] 2026-03-12 22:27:20,178 | INFO     | sum of square deviations: 3168461268.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,179 | INFO     | sum of deviations: -9983031006.000002
[2026-03-12 23:41:16] 2026-03-12 22:27:20,179 | INFO     | mean x: 1773347812.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,179 | INFO     | mean y: 2335578.880184332
[2026-03-12 23:41:16] 2026-03-12 22:27:20,180 | INFO     | intersect: 5589712129.893861
[2026-03-12 23:41:16] 2026-03-12 22:27:20,180 | INFO     | chi2: 0.03644780294516607
[2026-03-12 23:41:16] 2026-03-12 22:27:20,180 | INFO     | current chi2=0.03644780294516607 (change=97.25724678825968 %)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,180 | INFO     | sum of square deviations: 2954447953.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,182 | INFO     | sum of deviations: -7431284099.499999
[2026-03-12 23:41:16] 2026-03-12 22:27:20,182 | INFO     | mean x: 1773347964.5
[2026-03-12 23:41:16] 2026-03-12 22:27:20,182 | INFO     | mean y: 2333755.070754717
[2026-03-12 23:41:16] 2026-03-12 22:27:20,182 | INFO     | intersect: 4462812579.240971
[2026-03-12 23:41:16] 2026-03-12 22:27:20,182 | INFO     | chi2: 0.03181862450888187
[2026-03-12 23:41:16] 2026-03-12 22:27:20,183 | INFO     | current chi2=0.03181862450888187 (change=12.700843568674284 %)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,183 | INFO     | left removable region: 20
[2026-03-12 23:41:16] 2026-03-12 22:27:20,183 | INFO     | sum of square deviations: 2334722845.0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,184 | INFO     | sum of deviations: -1290295576.5000014
[2026-03-12 23:41:16] 2026-03-12 22:27:20,184 | INFO     | mean x: 1773348086.5
[2026-03-12 23:41:16] 2026-03-12 22:27:20,184 | INFO     | mean y: 2328530.1173469387
[2026-03-12 23:41:16] 2026-03-12 22:27:20,185 | INFO     | intersect: 982377702.3374834
[2026-03-12 23:41:16] 2026-03-12 22:27:20,185 | INFO     | chi2: 0.015682741557883132
[2026-03-12 23:41:16] 2026-03-12 22:27:20,185 | INFO     | current memory leak: -0.55 B/s (using 196 data points, chi2=0.02)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | could have reported an average CPU frequency of 2527 MHz (11 samples)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | ..............................
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . Timing measurements:
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . get job = 0 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . initial setup = 6 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . payload setup = 6 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . stage-in = 0 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . payload execution = 13519 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . stage-out = 1 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | . log creation = 0 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,186 | INFO     | ..............................
[2026-03-12 23:41:16] 2026-03-12 22:27:20,285 | INFO     | 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | job summary report
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | --------------------------------------------------
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | PanDA job id: 7049375734
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | task id: 48967085
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | errors: (none)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,286 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | pilot state: finished 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | transexitcode: 0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | exeerrorcode: 0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | exeerrordiag: 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | exitcode: 0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | exitmsg: OK
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | cpuconsumptiontime: 51979 s
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | nevents: 400
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | neventsw: 0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | pid: 2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | pgrp: 2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:20,287 | INFO     | corecount: 4
[2026-03-12 23:41:16] 2026-03-12 22:27:20,288 | INFO     | event service: False
[2026-03-12 23:41:16] 2026-03-12 22:27:20,288 | INFO     | sizes: {0: 2279816, 1: 2280277, 11: 2280277, 13529: 2310415, 13530: 2310414, 13531: 2319490, 13533: 2319868}
[2026-03-12 23:41:16] 2026-03-12 22:27:20,288 | INFO     | --------------------------------------------------
[2026-03-12 23:41:16] 2026-03-12 22:27:20,288 | INFO     | 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,288 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-12 23:41:16] 2026-03-12 22:27:20,313 | INFO     | job 7049375734 has completed (purged errors)
[2026-03-12 23:41:16] 2026-03-12 22:27:20,313 | INFO     | overall cleanup function is called
[2026-03-12 23:41:16] 2026-03-12 22:27:20,777 | INFO     | PID=2608255 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-12 23:41:16] 2026-03-12 22:27:20,777 | INFO     | .. there are 10 such processes running
[2026-03-12 23:41:16] 2026-03-12 22:27:21,324 | INFO     | --- collectZombieJob: --- 10, [2613033]
[2026-03-12 23:41:16] 2026-03-12 22:27:21,325 | INFO     | zombie collector waiting for pid 2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:21,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-12 23:41:16] 2026-03-12 22:27:21,325 | INFO     | collected zombie processes
[2026-03-12 23:41:16] 2026-03-12 22:27:21,325 | INFO     | will attempt to kill all subprocesses of pid=2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:21,723 | INFO     | process IDs to be killed: [2613033] (in reverse order)
[2026-03-12 23:41:16] 2026-03-12 22:27:21,852 | WARNING  | found no corresponding commands to process id(s)
[2026-03-12 23:41:16] 2026-03-12 22:27:21,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-12 23:41:16] 2026-03-12 22:27:21,866 | INFO     | did not find any defunct processes belonging to 2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:21,879 | INFO     | did not find any defunct processes belonging to 2613033
[2026-03-12 23:41:16] 2026-03-12 22:27:21,879 | INFO     | ready for new job
[2026-03-12 23:41:16] 2026-03-12 22:27:21,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-12 23:41:16] 2026-03-12 22:27:21,882 | INFO     | **************************************
[2026-03-12 23:41:16] 2026-03-12 22:27:21,882 | INFO     | ***  PanDA Pilot version 3.11.5.1  ***
[2026-03-12 23:41:16] 2026-03-12 22:27:21,882 | INFO     | **************************************
[2026-03-12 23:41:16] 2026-03-12 22:27:21,882 | INFO     | 
[2026-03-12 23:41:16] 2026-03-12 22:27:21,886 | INFO     | architecture information:
[2026-03-12 23:41:16] 2026-03-12 22:27:21,887 | INFO     | executing command: cat /etc/os-release
[2026-03-12 23:41:16] 2026-03-12 22:27:21,903 | INFO     | cat /etc/os-release:
[2026-03-12 23:41:16] NAME="CentOS Linux"
[2026-03-12 23:41:16] VERSION="7 (Core)"
[2026-03-12 23:41:16] ID="centos"
[2026-03-12 23:41:16] ID_LIKE="rhel fedora"
[2026-03-12 23:41:16] VERSION_ID="7"
[2026-03-12 23:41:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-12 23:41:16] ANSI_COLOR="0;31"
[2026-03-12 23:41:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-12 23:41:16] HOME_URL="https://www.centos.org/"
[2026-03-12 23:41:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-12 23:41:16] 
[2026-03-12 23:41:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-12 23:41:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-12 23:41:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-12 23:41:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-12 23:41:16] 
[2026-03-12 23:41:16] 2026-03-12 22:27:21,904 | INFO     | **************************************
[2026-03-12 23:41:16] 2026-03-12 22:27:22,407 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-12 23:41:16] 2026-03-12 22:27:22,426 | INFO     | sufficient remaining disk space (24791482368 B)
[2026-03-12 23:41:16] 2026-03-12 22:27:22,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-12 23:41:16] 2026-03-12 22:27:22,427 | INFO     | current server update state: UPDATING_FINAL
[2026-03-12 23:41:16] 2026-03-12 22:27:22,427 | INFO     | update_server=False
[2026-03-12 23:41:16] 2026-03-12 22:27:22,427 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-12 23:41:16] 2026-03-12 22:27:22,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-12 23:41:16] 2026-03-12 22:27:22,736 | INFO     | all data control threads have been joined
[2026-03-12 23:41:16] 2026-03-12 22:27:22,844 | INFO     | all payload control threads have been joined
[2026-03-12 23:41:16] 2026-03-12 22:27:23,039 | INFO     | all job control threads have been joined
[2026-03-12 23:41:16] 2026-03-12 22:27:23,432 | INFO     | [job] retrieve thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:23,435 | INFO     | [job] validate thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:23,596 | INFO     | [payload] execute_payloads thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:23,607 | WARNING  | process 2613033 can no longer be monitored (due to stat problems) - aborting
[2026-03-12 23:41:16] 2026-03-12 22:27:23,741 | INFO     | [data] control thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:23,849 | INFO     | [payload] control thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:23,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-12 23:41:16] 2026-03-12 22:27:23,907 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 23:41:16] 2026-03-12 22:27:23,908 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-12 23:41:16] 2026-03-12 22:27:23,909 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-12 23:41:16] 2026-03-12 22:27:23,909 | WARNING  | maxPSS not found in memory monitor output
[2026-03-12 23:41:16] 2026-03-12 22:27:23,910 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049375734/payload.stdout) since it has not been created yet
[2026-03-12 23:41:16] 2026-03-12 22:27:23,910 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-12 23:41:16] 2026-03-12 22:27:23,928 | INFO     | sufficient remaining disk space (24791482368 B)
[2026-03-12 23:41:16] 2026-03-12 22:27:23,928 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-12 23:41:16] 2026-03-12 22:27:23,928 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7049375734/HITS.48967085._004972.pool.root.1 since it does not exist
[2026-03-12 23:41:16] 2026-03-12 22:27:23,954 | INFO     | [payload] validate_pre thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:24,045 | INFO     | [job] control thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:24,065 | INFO     | [payload] failed_post thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:24,119 | INFO     | [data] copytool_in thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:24,322 | INFO     | number of running child processes to parent process 2613033: 1
[2026-03-12 23:41:16] 2026-03-12 22:27:24,322 | INFO     | maximum number of monitored processes: 6
[2026-03-12 23:41:16] 2026-03-12 22:27:24,322 | INFO     | aborting job monitoring since job object (job id=7049375734) has expired
[2026-03-12 23:41:16] 2026-03-12 22:27:24,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:41:16] 2026-03-12 22:27:24,323 | INFO     | will abort loop
[2026-03-12 23:41:16] 2026-03-12 22:27:24,725 | INFO     | [payload] validate_post thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:24,932 | INFO     | [job] create_data_payload thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:25,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-12 23:41:16] 2026-03-12 22:27:25,328 | INFO     | [job] job monitor thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:25,902 | INFO     | [data] copytool_out thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:26,305 | INFO     | [job] queue monitor thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:26,434 | INFO     | [data] queue_monitor thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:33,193 | INFO     | job.realtimelogging is not enabled
[2026-03-12 23:41:16] 2026-03-12 22:27:34,198 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-12 23:41:16] 2026-03-12 22:27:53,294 | INFO     | PID=2608255 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-12 23:41:16] 2026-03-12 22:27:53,295 | INFO     | .. there are 10 such processes running
[2026-03-12 23:41:16] 2026-03-12 22:27:53,295 | INFO     | found 0 job(s) in 20 queues
[2026-03-12 23:41:16] 2026-03-12 22:27:53,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-12 23:41:16] 2026-03-12 22:27:53,295 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-12 23:41:16] 2026-03-12 22:27:57,599 | INFO     | [monitor] cgroup control has ended
[2026-03-12 23:41:16] 2026-03-12 22:27:59,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23251675936576)>', '<ExcThread(monitor, started 23251433821952)>']
[2026-03-12 23:41:16] 2026-03-12 22:28:00,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-12 23:41:16] 2026-03-12 22:28:00,331 | INFO     | [monitor] control thread has ended
[2026-03-12 23:41:16] 2026-03-12 22:28:04,670 | INFO     | all workflow threads have been joined
[2026-03-12 23:41:16] 2026-03-12 22:28:04,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-12 23:41:16] 2026-03-12 22:28:04,672 | INFO     | traces error code: 0
[2026-03-12 23:41:16] 2026-03-12 22:28:04,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-12 23:41:16] 2026-03-12 22:28:04,845 [wrapper] ==== pilot stdout END ====
[2026-03-12 23:41:16] 2026-03-12 22:28:04,848 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-12 23:41:16] 2026-03-12 22:28:04,850 [wrapper] pilotpid: 2608255
[2026-03-12 23:41:16] 2026-03-12 22:28:04,853 [wrapper] Pilot exit status: 0
[2026-03-12 23:41:16] 2026-03-12 22:28:04,863 [wrapper] pandaids: 7049375734
[2026-03-12 23:41:16] 2026-03-12 22:28:04,941 [wrapper] cleanup supervisor_pilot 2856712 2608256
[2026-03-12 23:41:16] 2026-03-12 22:28:04,945 [wrapper] Test setup, not cleaning
[2026-03-12 23:41:16] 2026-03-12 22:28:04,948 [wrapper] apfmon messages muted
[2026-03-12 23:41:16] 2026-03-12 22:28:04,950 [wrapper] ==== wrapper stdout END ====
[2026-03-12 23:41:16] 2026-03-12 22:28:04,953 [wrapper] ==== wrapper stderr END ====
[2026-03-12 23:41:16]  *** Error codes and diagnostics ***
[2026-03-12 23:41:16]     "exeErrorCode": 0,
[2026-03-12 23:41:16]     "exeErrorDiag": "",
[2026-03-12 23:41:16]     "pilotErrorCode": 0,
[2026-03-12 23:41:16]     "pilotErrorDiag": "",
[2026-03-12 23:41:16]  *** Listing of results directory ***
[2026-03-12 23:41:16] total 409528
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc    585013 Mar 11 03:01 pilot3.tar.gz
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc      5111 Mar 11 03:04 queuedata.json
[2026-03-12 23:41:16] -rwx------. 1 boinc boinc     36322 Mar 11 03:05 runpilot2-wrapper.sh
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc       100 Mar 12 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-12 23:41:16] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 19:41 run_atlas
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc       105 Mar 12 19:41 job.xml
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc      6563 Mar 12 19:41 init_data.xml
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc 211780975 Mar 12 19:41 EVNT.48967083._000199.pool.root.1
[2026-03-12 23:41:16] drwxrwx--x. 2 boinc boinc      4096 Mar 12 19:41 shared
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc    597518 Mar 12 19:41 input.tar.gz
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc     15845 Mar 12 19:41 start_atlas.sh
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc         0 Mar 12 19:41 boinc_lockfile
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc      2561 Mar 12 19:41 pandaJob.out
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc   1006522 Mar 12 19:41 agis_schedconf.cvmfs.json
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc       451 Mar 12 19:41 workernode_map.json
[2026-03-12 23:41:16] drwx------. 5 boinc boinc      4096 Mar 12 19:41 pilot3
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc 199019935 Mar 12 23:26 HITS.48967085._004972.pool.root.1
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc       529 Mar 12 23:26 boinc_task_state.xml
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc        95 Mar 12 23:27 pilot_heartbeat.json
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc      1034 Mar 12 23:27 memory_monitor_summary.json
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc   1511578 Mar 12 23:27 agis_ddmendpoints.agis.ALL.json
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc    403813 Mar 12 23:27 log.48967085._004972.job.log.tgz.1
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc      6416 Mar 12 23:27 heartbeat.json
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc      6441 Mar 12 23:28 pilotlog.txt
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc   1904854 Mar 12 23:28 log.48967085._004972.job.log.1
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc       357 Mar 12 23:28 output.list
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc       620 Mar 12 23:28 runtime_log
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc   2324480 Mar 12 23:28 result.tar.gz
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc      9205 Mar 12 23:28 runtime_log.err
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc       665 Mar 12 23:28 VE5MDmz7NK9n9Rq4apOajLDm4fhM0noT9bVooX4SDm2AfLDmB42LJm.diag
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc        26 Mar 12 23:41 wrapper_checkpoint.txt
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc      8192 Mar 12 23:41 boinc_mmap_file
[2026-03-12 23:41:16] -rw-r--r--. 1 boinc boinc     21413 Mar 12 23:41 stderr.txt
[2026-03-12 23:41:16] HITS file was successfully produced:
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc 199019935 Mar 12 23:26 shared/HITS.pool.root.1
[2026-03-12 23:41:16]  *** Contents of shared directory: ***
[2026-03-12 23:41:16] total 404056
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc 211780975 Mar 12 19:41 ATLAS.root_0
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc    597518 Mar 12 19:41 input.tar.gz
[2026-03-12 23:41:16] -rw-r--r--. 2 boinc boinc     15845 Mar 12 19:41 start_atlas.sh
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc 199019935 Mar 12 23:26 HITS.pool.root.1
[2026-03-12 23:41:16] -rw-------. 1 boinc boinc   2324480 Mar 12 23:28 result.tar.gz
23:41:18 (2604477): run_atlas exited; CPU time 52532.614138
23:41:18 (2604477): called boinc_finish(0)

</stderr_txt>
]]>

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