Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-10 18:51:49 (60403): vboxwrapper version 26210
2026-03-10 18:51:49 (60403): BOINC client version: 8.2.8
2026-03-10 18:51:49 (60403): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-03-10 18:51:49 (60403): Successfully copied 'init_data.xml' to the shared directory.
2026-03-10 18:51:49 (60403): Create VM. (boinc_3c7600b806c67e1a, slot#0)
2026-03-10 18:51:49 (60403): Setting Memory Size for VM. (4800MB)
2026-03-10 18:51:49 (60403): Setting CPU Count for VM. (8)
2026-03-10 18:51:50 (60403): Setting Chipset Options for VM.
2026-03-10 18:51:50 (60403): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-10 18:51:50 (60403): Setting Boot Options for VM.
2026-03-10 18:51:50 (60403): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-10 18:51:50 (60403): Enabling VM Network Access.
2026-03-10 18:51:50 (60403): Disabling USB Support for VM.
2026-03-10 18:51:50 (60403): Disabling COM Port Support for VM.
2026-03-10 18:51:50 (60403): Disabling LPT Port Support for VM.
2026-03-10 18:51:50 (60403): Disabling Audio Support for VM.
2026-03-10 18:51:50 (60403): Disabling Clipboard Support for VM.
2026-03-10 18:51:50 (60403): Disabling Drag and Drop Support for VM.
2026-03-10 18:51:50 (60403): Adding storage controller(s) to VM.
2026-03-10 18:51:51 (60403): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-10 18:51:51 (60403): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-10 18:51:51 (60403): forwarding host port 46019 to guest port 80
2026-03-10 18:51:51 (60403): Enabling remote desktop for VM.
2026-03-10 18:51:51 (60403): Required extension pack not installed, remote desktop not enabled.
2026-03-10 18:51:51 (60403): Enabling shared directory for VM.
2026-03-10 18:51:52 (60403): Starting VM using VBoxManage interface. (boinc_3c7600b806c67e1a, slot#0)
2026-03-10 18:51:53 (60403): Successfully started VM. (PID = '60879')
2026-03-10 18:51:53 (60403): Reporting VM Process ID to BOINC.
2026-03-10 18:51:53 (60403): Guest Log: BIOS: VirtualBox 7.0.16
2026-03-10 18:51:53 (60403): Guest Log: CPUID EDX: 0x178bfbff
2026-03-10 18:51:53 (60403): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-10 18:51:53 (60403): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-10 18:51:53 (60403): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-10 18:51:53 (60403): Detected: Web Application Enabled (http://localhost:46019)
2026-03-10 18:51:53 (60403): Preference change detected
2026-03-10 18:51:53 (60403): Setting CPU throttle for VM. (100%)
2026-03-10 18:51:53 (60403): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 18:51:55 (60403): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-10 18:51:55 (60403): Guest Log: BIOS: Booting from Hard Disk...
2026-03-10 18:52:17 (60403): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-10 18:52:17 (60403): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-10 18:52:17 (60403): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-10 18:52:28 (60403): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-10 18:52:28 (60403): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-10 18:52:37 (60403): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000309 main     Log opened 2026-03-11T01:52:35.933773000Z
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000488 main     OS Product: Linux
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000561 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000624 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000686 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000688 main     Process ID: 1333
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.000690 main     Package type: LINUX_64BITS_GENERIC
2026-03-10 18:52:37 (60403): Guest Log: 00:00:00.003039 main     5.2.32 r132073 started. Verbose level = 0
2026-03-10 18:52:37 (60403): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-10 18:52:37 (60403): Guest Log: [INFO] Mounting shared directory
2026-03-10 18:52:37 (60403): Guest Log: [INFO] Checking for init_data.xml
2026-03-10 18:52:47 (60403): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-10 18:52:47 (60403): Guest Log: [INFO] Detected branch: prod
2026-03-10 18:52:47 (60403): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-10 18:52:47 (60403): Guest Log: Copying input files
2026-03-10 18:52:49 (60403): Guest Log: Copied input files into RunAtlas.
2026-03-10 18:52:49 (60403): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-10 18:52:49 (60403): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-10 18:52:49 (60403): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-10 18:52:49 (60403): Guest Log: Further information can be found at the LHC@home message board.
2026-03-10 18:53:00 (60403): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-10 18:53:01 (60403): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-10 18:53:01 (60403): Guest Log: 2.6.3.0 1611 0 30188 157137 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-10 18:53:03 (60403): Guest Log: copied the webapp to /var/www
2026-03-10 18:53:03 (60403): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-10 18:53:03 (60403): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-10 18:53:03 (60403): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-10 18:53:03 (60403): Guest Log:  *** Starting ATLAS job. (PandaID=7047737059 taskID=48998032) ***
2026-03-10 19:01:19 (60403): Preference change detected
2026-03-10 19:01:19 (60403): Setting CPU throttle for VM. (100%)
2026-03-10 19:01:19 (60403): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-10 20:30:53 (60403): Status Report: Elapsed Time: '6000.000000'
2026-03-10 20:30:53 (60403): Status Report: CPU Time: '41184.140000'
2026-03-10 22:09:54 (60403): Status Report: Elapsed Time: '12000.000000'
2026-03-10 22:09:54 (60403): Status Report: CPU Time: '87391.860000'
2026-03-10 23:48:55 (60403): Status Report: Elapsed Time: '18000.000000'
2026-03-10 23:48:55 (60403): Status Report: CPU Time: '133610.570000'
2026-03-11 00:01:55 (60403): Guest Log:  *** Job finished ***
2026-03-11 00:01:55 (60403): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:44,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:44,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:45,494 | INFO     | [monitor] cgroup control has ended
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:46,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462903826240)>', '<ExcThread(monitor, started 140462300047104)>']
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:47,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:47,332 | INFO     | [monitor] control thread has ended
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,460 | INFO     | all workflow threads have been joined
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,460 | INFO     | end of generic workflow (traces error code: 0)
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,461 | INFO     | traces error code: 0
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,605 [wrapper] ==== pilot stdout END ====
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,620 [wrapper] ==== wrapper stdout RESUME ====
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,634 [wrapper] pilotpid: 6039
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,648 [wrapper] Pilot exit status: 0
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,764 [wrapper] pandaids: 7047737059
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,856 [wrapper] cleanup supervisor_pilot 29718 6040
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,870 [wrapper] Test setup, not cleaning
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,885 [wrapper] apfmon messages muted
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,899 [wrapper] ==== wrapper stdout END ====
2026-03-11 00:01:55 (60403): Guest Log: 2026-03-11 07:01:51,913 [wrapper] ==== wrapper stderr END ====
2026-03-11 00:01:55 (60403): Guest Log:  *** Error codes and diagnostics ***
2026-03-11 00:01:55 (60403): Guest Log:     "exeErrorCode": 0,
2026-03-11 00:01:55 (60403): Guest Log:     "exeErrorDiag": "",
2026-03-11 00:01:55 (60403): Guest Log:     "pilotErrorCode": 0,
2026-03-11 00:01:55 (60403): Guest Log:     "pilotErrorDiag": "",
2026-03-11 00:01:55 (60403): Guest Log:  *** Listing of results directory ***
2026-03-11 00:01:55 (60403): Guest Log: total 293296
2026-03-11 00:01:55 (60403): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  9 20:45 runpilot2-wrapper.sh
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  9 20:46 queuedata.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  9 20:46 pilot3.tar.gz
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas      5770 Mar 11 01:52 init_data.xml
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas    597943 Mar 11 01:52 input.tar.gz
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar 11 01:52 start_atlas.sh
2026-03-11 00:01:55 (60403): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 11 01:52 EVNT.48998030._000051.pool.root.1 -> /data/./ATLAS.root_0
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Mar 11 01:53 pandaJob.out
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas   1006644 Mar 11 01:54 agis_schedconf.cvmfs.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas       434 Mar 11 01:54 workernode_map.json
2026-03-11 00:01:55 (60403): Guest Log: drwx------. 5 atlas atlas      4096 Mar 11 01:54 pilot3
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas 290347314 Mar 11 07:00 HITS.48998032._001277.pool.root.1
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas      1042 Mar 11 07:01 memory_monitor_summary.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas   1511578 Mar 11 07:01 agis_ddmendpoints.agis.ALL.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas    531395 Mar 11 07:01 log.48998032._001277.job.log.tgz.1
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas      6405 Mar 11 07:01 heartbeat.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas        95 Mar 11 07:01 pilot_heartbeat.json
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas      4801 Mar 11 07:01 pilotlog.txt
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas   2528693 Mar 11 07:01 log.48998032._001277.job.log.1
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas       357 Mar 11 07:01 output.list
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 11 07:01 runtime_log
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas   3082240 Mar 11 07:01 result.tar.gz
2026-03-11 00:01:55 (60403): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Mar 11 07:01 runtime_log.err
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas       663 Mar 11 07:01 F7GLDmwewJ9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPBbLDmOiIqQn.diag
2026-03-11 00:01:55 (60403): Guest Log: Looking for outputfile HITS.48998032._001277.pool.root.1
2026-03-11 00:01:55 (60403): Guest Log: HITS file was successfully produced
2026-03-11 00:01:55 (60403): Guest Log: -rw-------. 1 atlas atlas 290347314 Mar 11 07:00 /home/atlas/RunAtlas/HITS.48998032._001277.pool.root.1
2026-03-11 00:01:56 (60403): Guest Log: Successfully finished the ATLAS job!
2026-03-11 00:01:56 (60403): Guest Log: Copying the results back to the shared directory!
2026-03-11 00:01:56 (60403): Guest Log:  *** Contents of shared directory: ***
2026-03-11 00:01:56 (60403): Guest Log: total 359904
2026-03-11 00:01:56 (60403): Guest Log: -rw-r--r--. 1 root root 364830491 Mar 11 01:51 ATLAS.root_0
2026-03-11 00:01:56 (60403): Guest Log: -rw-r--r--. 1 root root      5770 Mar 11 01:51 init_data.xml
2026-03-11 00:01:56 (60403): Guest Log: -rw-r--r--. 1 root root    597943 Mar 11 01:51 input.tar.gz
2026-03-11 00:01:56 (60403): Guest Log: -rw-r--r--. 1 root root   3082240 Mar 11 07:01 result.tar.gz
2026-03-11 00:01:56 (60403): Guest Log: -rw-r--r--. 1 root root     15845 Mar 11 01:51 start_atlas.sh
2026-03-11 00:01:56 (60403): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-11 00:01:56 (60403): VM Completion File Detected.
2026-03-11 00:01:56 (60403): Powering off VM.
2026-03-11 00:01:56 (60403): Successfully stopped VM.
2026-03-11 00:01:56 (60403): Deregistering VM. (boinc_3c7600b806c67e1a, slot#0)
2026-03-11 00:01:56 (60403): Removing network bandwidth throttle group from VM.
2026-03-11 00:01:57 (60403): Removing VM from VirtualBox.
2026-03-11 00:02:02 (60403): called boinc_finish(0)

</stderr_txt>
]]>

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